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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030973445.1 PREDICTED: Strongylocentrotus purpuratus CLIP-associating protein 1 (LOC581599), transcript variant X17, mRNA TAATGACGTCACACATTTGAAATCGGTCAACATGGCGGTACTCTCGATACTAGTCAAAACACTAATGGCT AGCTACTAACGACGATTGCACTCGGCTTCCAATGAAAATATGCACGAAATTTGGAGCTTAACAAGAGGAT TGCATTCTACAGTGTTAACAAAGGAGGATTACATGTGAACACCCTGTTGTCTGAAGAGGGAAATACCTTC AAGTGCTGCTATTTTAGGTTTCGTTTATGATCATCAAACCGGAAGTCACACAGGAAGAGTATCAGTATAC GTCCATCTAATCTGAGAGAACATTAATAGTTCATAGCTGCTCAATAGTAGGAAGAAAATAGATCAGACAC TGCAGAGACAAGATACATATAAACCATGTAACAAAAAGGGTTTCCTGTCAAACAATTTCCAGACTACATG CATTTTATTCTTTGAGCTCATCGCCCTGCAGAGGAAATATCTATCCTGTAGTGCTGCAGGATTTTTTATA CTCGTGAATTTGCCTCCTTTGGAGGGGCCAGACTGTGGACATGGCAGGGAAGACGTTGGATGACATCTTC AATGATGTTCTGAAGCAGGACACTACGTCCAAGTTTCAGGCTTCAGAGGATTTGCAGAACTATCTCCAGG ACAATGAGAATTCTATGCATTGTGACAACATGGACAGATTGGTGGATGCCCTGGCAGGATGGGTCAATAG TAGCAATTTCAAGATATCCCTCTGTGGTCTTGAGTGTCTACTGCTGCTTGTCGATAGAATAGGAGAAAAA TTCAAGAATCATATAGGAACAGTTTTACCGGCAGCACTTGACAGATTGGGAGATAGCAAGGAGCAGGTTC GAGAACATTCTCAAGCTCTCATTCAAAAGCTGATGTCACCTGCTTCTGCACCACAGTTTGTATTTGAGAG GCTGATGAAAGGATTTTCGCACAAAGGCTGGCGTGTTCGAGAGGAAGTTCTACTATGTTTAATGCAGACG ATTAATGTATTTGGTGCTAATTCATTATTACTAAATAAAATAGTTCCATCAATATGCAAGCTTCTCGGGG ATCCCAACAGTCAAGTAAGAGACACAGCAATCAACACTCTAGTTGAGATATACAGACATGTAGGAGAGAA GGTTAGGATAGACCTGGGAAAAAAGGGCATTCCATCATCAAGGTTATCTATTATTTATGCCAAGTTTGAT GATGTGAAGCGGTCTGGACAAATGTTGGTGCAGCCTGAACAAAGTGCTCCTGCCAAACCATCAGCATCAC AAGATGAGACAGACAGTAAGCCTGCTGCTGCACAAAAAACTGCCCCTGCTAAGAGGCCTACCACATCCAC AACACAACGAAAGTCCATCAGTAGACCATCAACAGGCGCAAGCAGTGGTGCAGTGGATGAGGCTCTCTTT CAAGCTTCCTATGAAGATGTCCCTAGTGTCTCAATATTCACAACGAAACAGTTGGAGGATGACCTGAGTA AGATGTCTACTATTCTGAACAATGATAAAGCAGATTGGGAACTTAGAGTAACGGCATTGAAGAAATTACG GGCATTCATCATAGCTGGTGCTGCAGAGTACGAATGCTTTGGTCAATCACTCAGACAGATGGAAGAGGCC CTCATTATGTCCGTCAAGGATCTAAGGTCAACGGTCTTGAGAGAAGCTTGCATCACATTAGCGTTTTTGT CCATTCGTCTGAGGCGGCAGTTTGACCACGCAGCAGAGGCAGTCTTACCCCATTTGTTTACCCACATCCA GAATAGTGTAAAGATTATGGCAACATCAGGCATCGTTGCAATAGATGTTATCATTAGGCATACACATTCA CCTAGGCTTATATCTATTATGAAAAGCAACGCAACTTCTAAGTCAACTGCCATTAGGAAGCAAACATTTC AATACATTAACACGGTTTTGAATGTATGGGACACACATACATTGGAGAGGCATGCTAACCTACTCTCAGA GGCCATACACAAGGGTATTGAGGATGCTGATTCAGAAGCAAGGGCTATCTCAAGAAAAGCATTCTGGAAG TTCTCAGAGCACTTCAAGAGCCATGCCGACAAGTTGTTCAACAACCTGGATCCCTCCAAGCAGAAGATGC TACAAGGAGAGCTCAGCCAAGCCTCCAGCTGTACCTCTCTAGACGGCAGGCCGCTCTCACGCTCCGCCAC CGCCAGCTCGCATGAAAATCTAAGGTTGGCTAGGGATTACAACACGGTGACTGCCAGCTTGCCAAGGAGA TCAGTAGCATCAAGGTCAAATCGAGCATCAGAGTCTTTTCGGACCAGAGCGGACAAGCCCGCCCTCTTGA ATCAACGTTCCAGCAGTGAGATCAACTTGGCGGCTGCGTCACGGGCCCGATCGCGGTATTCGTCGGCAGG TCAGAGGGCAGCCAGCGGGGCGGCGGCAAGAATTTCTAGATCTAAATCCACCTCTCGGGAGAGCTTGGCT GCCACTCCAAGAGGGTCCTCTCTCCTTCAGACTCCTAACGGTCGTGCAGGGAGAACACGATCTAGAATCG GGATTTCCCAATCACAACCTGGTAGCAGATCTAACAGTCGATCAAGCTCACCTTCGACAGTCTCCTCCAG ATATTCCAACATCCAGACCAACGGCAGGACAAGAAGAAAGAGCGGTATCCCAGTGCCTCGCAGTCAGGGA GCAAGCAGAGAGGCCAGTCCTAGCAGATATGGATATGCTAGTGCACGAGAGAGGCGGCAGAGTGGATCAT CTCTTGGTCCAGCCCAGAGGGAGCCTAAGGAGAAGCAGAACATCATGGCCCAGAGAGTCCTGGTCCCTGG TCAAGATGCTGAAGCTGCCCTAGCTGATGCTCTGATATCCGCCCAGAGAGCCCTCAGGAGCAACTATGGG TTCAGTTACGATTCCGATTACACCGACAATTTGGCCCAGAAGGTGATGCTAAAGAAGAGATATGATAATA ACTTCTCCGACGATGAGAGCGATGCTTCCAGTGTGTGTTCTGTTGGATCGTATGGTTCGGGACCAGCAAA GATTATCGAGGATGTACCTGAAGTCCTAAATAAGATGGCAAGTCCTGCATGGTCAGAGAGGAAAGAAGGA TTGATAGGTCTTCAGTACACCCTACATAGCAACAGAGCACTCAGTCGATCTGAAATCAAGAGAGTGACAG AGTTATTCTCAAGGATGTTTGCTGACCCATCGAGCAAGACATTCAGCTTGTTTCTGGAGACCCTAGGGGA GTTCATCATTGTTCACAAAGCTGAGCTTCTAGATTGGTTATTTGTACTCATCACAAGGCTATTACAGAAG ATGGGTTCTGATCTATTGGGTTCAGTTCTCAACAAGGTTCAAAGGACTCTAGAAATTGTCAGAGAAAGCT TCCCATATGAGATCCAATTCAGGATACTAACCAAGTACATCATGGACCAGACACAAACACCAAACATGAA GACAAAGGTTGCGATGCTTCGATTCATGGAGAGCTTGACAGACGTAATGGATCCTGCAGACTTCAGCAAC TCAGCGGAAACCAGGCTGGCTGTGTCCAGGATCATAGGATGGACCAAAGAGGCCAAGAGCCCTGAAGTCA GGAGGGCATCCCAAGCTGTGTTGATAGCTCTGTTTGAACTCAACACCCCAGAATTTAGCATGATGTTATC TGTACTACCCAAGACCTACCAGGAGGGGGCGACCAAGCTCTTGCGCAATGACCTGCGTATCGCATCCAGC ATTGATGATGAGATTACTGCTCAGGAGTACAGGAGTAAGGCATCTCCACGGTCAGTCCTGAAAGCCTCCC CTCGATCAACAGGTTCCTCACCCCGTGGGAGCTATGCCAGCAATGGCCCTCCAGACACCGAGTTCCTCAA CTCTGAAGACATCTACGACTCACTGCGCCGAACCACCGCCGAGATTCAGAACTATATGCACAGCAGCCGC GACGACCTGGACCATGTGGCTGTCACCAAGGACACGCGGGTGGACAGTGATGAGGGCATAGCAGATACCA TGGGTAGAATGACAGTGACCGACGGTAATTACGAGGATGAGACTTTCCCCGAAGATCACCAAGATATTCT GGTTCCTCTTTTGACTGAGCTGTCCAATCATAATGGAAGGTTTGAAGAGAGAAAGAATGCAATGATGCAG CTAATCCGTCTCACCCGGTCTGAGAGCCTCTCGCTTTGGGATGATCACTTCAAGACGGTGCTCCTTCTTA TGCTGGAGACATTAGGAGATGTAGAGTCATCAATCCGAGCCATGGCACTGCGTGTCCTTCGAGAGATCCT CCGGAATCAACCTGATCGCTTCAAGGACTATGCTGAGCTTACAATCCTCAAGATATTGGAGGCACACAGG GATCCACACAGTGAGGTTGTAAGACAGGCAGAGGAGACTTCAGCCACCCTGGCTATTTCCATTGCTCCTA GCCAGTGTGTCCGAGTCTTGTGTCCTATCATCCAGACAGCTGACTGCCCCATCAACCAGGCTGCCATCAA GATGTTAACCAAGGTTGTTGAACTGATGTCAGAAGCAGACGTACTGGAAATCTTACCCGAAGTGATTGTA GTTCTACTCAAGTCGTATGATCACACTGAGAGTAGTGTCCGAAAGGCCAGCGTCTTTTGCCTGGTGGCCA TCTATAACATCATAGGAGATAAACTCAAAGAGAAGCTAGCGGACCTACCAGGGAGTAAGATGAAGCTGTT GAACCTGTACATTAAGCGTGCTCAAGCCGAGAAGGAAGCTCAGACACCCTCTCCCAGTAGTCCTTCAGCT TTATCCACTGGCAGCAGATAGTAGCCGTCCCAATATCAGACTGTACGCACTAACAAACACATGCCCCTGT GGATGGGACTGTTATTAGAGACCTGAGCAAGAACTCTGAATCGGTGCACCATCAGGATACATTTACATGC CATAAGTGTGTAATGAATTCAATAACCTGCAAGCACTCTTCTCAAGTAAATGTATCCGCAATTAGCTGAC CCAGAATCAGATTGTCACCCGCAGCACATATGGGAATCAATGGATGGGACTATTAGGAGAGAACTGATCA GGAATTCTCACAGGTAGTGCAACATCCATGACTGTAGTATAGGCTGTTAAAGTGTGATCTACTCAGAATC CCATCAGTTCTCTCTTCTGGTAGTAGAGAGTAGTGGATCAAACTATGTTAACTAACACATACTCCTTAGG GTGGGACTGTTAAAAAGACATGATGAAGAACTCAGCTACTTAGTCTATTATGACACTGCACTATATTTAT GTGTGTCTAGCAACATCTTTGAAAGCGACAGGGAATTCTCTACAGGTTTTCCTTCACTGTCCGAAGATCA GACTTTGTAAACCATCACACTCGCACGCCTGCACCCAACTATGGATAAGACTATGGGCAGAAGTAAGGTG ATTAGGGATTCATGTGCCACTGCTTAACATGAGACTATGCGAGCTGTCTGTCAGGATCTCTTAATAATGC ACATTCTAAATCAATGATCTCATCAGGATTTCAACCTTTGTTTAGCTCCCTCTTAAGAAATTAATCAGCT CACCTGCTGAGAGCAAGAAGGTCACTAACTCTATGCAAGTGTATGTGATTAACTCCCTACTGGTTCTCAA TAGAAAATCCCTATTTGTCAATGCCACTATTGGCCATTGTTGGAAATAATGTCAATATGTTCTTTATGAG AGGCATGTATAAGGCTACAAGTCATCCTTTCTAAAGGCTTTTAAGGTCACAACACTTTGGAAAAGTCATC AAAAGTTCCTGCAACAATGTAGCCAGGTGCATACTTGTCAGTATACATTGTACATGAACTTATGAAAATA GATCAATGCAGTTATGGATTACAGAAGATTAAGGCACCCTTCTATAAAAGTATTGAGTGCATGAGGTACA TCTGTACTTATGTAAGGTAATATTGCGCAAAAGATAGGACATTAGGTGGTATTGATTGAAACTTGCGACC CTTGGTGAGCAGTTGAATTTAGGTAGCTAACAACATTTTTGTATGAAATATTGAACCTCACTGCCATTTA TGTCAAAGCTGTGGTGATTTGAGAACAATCTCTTAAGGGAAGATGAACTATAGTGTTATTGGCTGGCCAA AGTTTGATCATTTGTATTCTTGATATTATCAAATATAAACTCATTATTCTTTCATTTTGATGACTTTTTT CTCAAGGAAACTTTTAAAATTGACTAATATACTCAGATTGAATTAATATCATTCACAAATTGAAGATTCT AGAAGCAGTGTACCAATTGAACACGAGAATTTAGATATTTGATAATAGTGAAAAAATTCCAATAGGATAT ACAAAAATATATGACTCACAAATAAGGAGAGTGTTAGCGGGCAAGAAATTATCATTATTATTCATATTTA CATAATGACAAACACATATCTTTGGGAAAAGGGGCCTCCTTATTATATTTTGTATGAGAAAGTTGGCATC ATTATTTGGGGGAATGAAAGAATTTTTGATTGATTTATTTGAGGGCCAAATCAGGAAATTGATAGAGCAA TGGTTTTCAGTCCAATGTAGAATGGTTTTGAATAATGTTGAATTCTGGTCATTTGGTTTTGATGTTACAC GTATCTGAAATTAACATGTTTATGGTATAGACACCAGAAAGATAGATTGAAGGAAATATGTATATAATTG CACAACGAAGAATGATTTGGGCACTTTTCGTCTGTTTGTTCACATACATAATGGTATTTTAGCAAGCCTT TGAAATGTCAAAATTGTATTTATTGTATGCTATGATAAAAAGTATAACAACTTGGCAAGGACACAATAAA TGTCTATTTAATCAAGAACAACTTCTTCATTCACCACTATCACAACCATTTGCCCAAATGGTATTGAAAT CTGGATCAATTTAGCCAAAGAAAAACATGCAGCCCTTTTTGTCCCCTGCTCATATGTTTCAATGTGTATT GTTTATTTTGTATTATCTCTTTTTGGTCAGGAGATTCATGGTATAAATTCTACATAGCTTATTTTTAATA TGTGCCTTCACGGTTTTTCATCTCAAAGCATCAATGGACATCTGCTTAGGATGGAAGTAAATTTTCACCT TCGCCGCGATCAGCAATTTTTTGTTGGATTTTTTGAGAATTATATGCATTGCATTAAACCTGTTGATATT CATCTCATGGTTATATTTGTTTTTATAAATAAAATCAAACAACATAAGAGAGGGTTTTAGAAAAATTCTA ACAGAATCCAACAAAAATCGCTGAATACTCATCTAAAACCCTCTCTGTGTTATTAGACTTTATGTATAAA ATAAATATAAC
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???blast.eval???
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???blast.eval.1???
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???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
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???blast.wordsize.5???
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???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds