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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030973446.1 PREDICTED: Strongylocentrotus purpuratus CLIP-associating protein 1 (LOC581599), transcript variant X18, mRNA AACATAAATACTGGCGGCCATCTTGAAAAATAGCCCGACTGGCTTGACATCGCTAAATGTACCTAGCGGC CATTTTGTAAAGAAATAATGAAGAAAAGGCAGGACGCTAAATATGATTTTTTATTTATTTGGCCTTTAAT AGTGTATAAAAGTTCTAGTATGTCTTTTCTTTGTTGTATAAAAAAGCATGCAATGCTTGATATCCCTTCT TATAATACATGTAAAAGAACCACGCATATACATCCTTTGCACCTTGCTATTATGATTTGTATTTTGTTTT GCATGCTCTTTTACAAACGACACCACTTCATAACCCATAACAGTCAAAAAAATCTCGGCAATCTCAAATC GACACCTCTACATCGTCATGGAATGTAAAAGCCAAAAGTGCTGTTGCTAAGAAAGTGGCCATGAGGGCTG CAGCTGAGGCTGCTGCACAAAAAACTGCCCCTGCTAAGAGGCCTACCACATCCACAACACAACGAAAGTC CATCAGTAGACCATCAACAGGCGCAAGCAGTGGTGCAGTGGATGAGGCTCTCTTTCAAGCTTCCTATGAA GATGTCCCTAGTGTCTCAATATTCACAACGAAACAGTTGGAGGATGACCTGAGTAAGATGTCTACTATTC TGAACAATGATAAAGCAGATTGGGAACTTAGAGTAACGGCATTGAAGAAATTACGGGCATTCATCATAGC TGGTGCTGCAGAGTACGAATGCTTTGGTCAATCACTCAGACAGATGGAAGAGGCCCTCATTATGTCCGTC AAGGATCTAAGGTCAACGGTCTTGAGAGAAGCTTGCATCACATTAGCGTTTTTGTCCATTCGTCTGAGGC GGCAGTTTGACCACGCAGCAGAGGCAGTCTTACCCCATTTGTTTACCCACATCCAGAATAGTGTAAAGAT TATGGCAACATCAGGCATCGTTGCAATAGATGTTATCATTAGGCATACACATTCACCTAGGCTTATATCT ATTATGAAAAGCAACGCAACTTCTAAGTCAACTGCCATTAGGAAGCAAACATTTCAATACATTAACACGG TTTTGAATGTATGGGACACACATACATTGGAGAGGCATGCTAACCTACTCTCAGAGGCCATACACAAGGG TATTGAGGATGCTGATTCAGAAGCAAGGGCTATCTCAAGAAAAGCATTCTGGAAGTTCTCAGAGCACTTC AAGAGCCATGCCGACAAGTTGTTCAACAACCTGGATCCCTCCAAGCAGAAGATGCTACAAGGAGAGCTCA GCCAAGCCTCCAGCTGTACCTCTCTAGACGGCAGGCCGCTCTCACGCTCCGCCACCGCCAGCTCGCATGA AAATCTAAGGTTGGCTAGGGATTACAACACGGTGACTGCCAGCTTGCCAAGGAGATCAGTAGCATCAAGG TCAAATCGAGCATCAGAGTCTTTTCGGACCAGAGCGGACAAGCCCGCCCTCTTGAATCAACGTTCCAGCA GTGAGATCAACTTGGCGGCTGCGTCACGGGCCCGATCGCGGTATTCGTCGGCAGGTCAGAGGGCAGCCAG CGGGGCGGCGGCAAGAATTTCTAGATCTAAATCCACCTCTCGGGAGAGCTTGGCTGCCACTCCAAGAGGG TCCTCTCTCCTTCAGACTCCTAACGGTCGTGCAGGGAGAACACGATCTAGAATCGGGATTTCCCAATCAC AACCTGGTAGCAGATCTAACAGTCGATCAAGCTCACCTTCGACAGTCTCCTCCAGATATTCCAACATCCA GACCAACGGCAGGACAAGAAGAAAGAGCGGTATCCCAGTGCCTCGCAGTCAGGGAGCAAGCAGAGAGGCC AGTCCTAGCAGATATGGATATGCTAGTGCACGAGAGAGGCGGCAGAGTGGATCATCTCTTGGTCCAGCCC AGAGGGAGCCTAAGGAGAAGCAGAACATCATGGCCCAGAGAGTCCTGGTCCCTGGTCAAGATGCTGAAGC TGCCCTAGCTGATGCTCTGATATCCGCCCAGAGAGCCCTCAGGAGCAACTATGGGTTCAGTTACGATTCC GATTACACCGACAATTTGGCCCAGAAGGTGATGCTAAAGAAGAGATATGATAATAACTTCTCCGACGATG AGAGCGATGCTTCCAGTGTGTGTTCTGTTGGATCGTATGGTTCGGGACCAGCAAAGATTATCGAGGATGT ACCTGAAGTCCTAAATAAGATGGCAAGTCCTGCATGGTCAGAGAGGAAAGAAGGATTGATAGGTCTTCAG TACACCCTACATAGCAACAGAGCACTCAGTCGATCTGAAATCAAGAGAGTGACAGAGTTATTCTCAAGGA TGTTTGCTGACCCATCGAGCAAGACATTCAGCTTGTTTCTGGAGACCCTAGGGGAGTTCATCATTGTTCA CAAAGCTGAGCTTCTAGATTGGTTATTTGTACTCATCACAAGGCTATTACAGAAGATGGGTTCTGATCTA TTGGGTTCAGTTCTCAACAAGGTTCAAAGGACTCTAGAAATTGTCAGAGAAAGCTTCCCATATGAGATCC AATTCAGGATACTAACCAAGTACATCATGGACCAGACACAAACACCAAACATGAAGACAAAGGTTGCGAT GCTTCGATTCATGGAGAGCTTGACAGACGTAATGGATCCTGCAGACTTCAGCAACTCAGCGGAAACCAGG CTGGCTGTGTCCAGGATCATAGGATGGACCAAAGAGGCCAAGAGCCCTGAAGTCAGGAGGGCATCCCAAG CTGTGTTGATAGCTCTGTTTGAACTCAACACCCCAGAATTTAGCATGATGTTATCTGTACTACCCAAGAC CTACCAGGAGGGGGCGACCAAGCTCTTGCGCAATGACCTGCGTATCGCATCCAGCATTGATGATGAGATT ACTGCTCAGGAGTACAGGAGTAAGGCATCTCCACGGTCAGTCCTGAAAGCCTCCCCTCGATCAACAGGTT CCTCACCCCGTGGGAGCTATGCCAGCAATGGCCCTCCAGACACCGAGTTCCTCAACTCTGAAGACATCTA CGACTCACTGCGCCGAACCACCGCCGAGATTCAGAACTATATGCACAGCAGCCGCGACGACCTGGACCAT GTGGCTGTCACCAAGGACACGCGGGTGGACAGTGATGAGGTATTGCCTGACCTGGTGCCAGGCATTAGAG TGGACAGTCCCGAGGGCAAGGTCAAGGAGTACCTGGAGTACCGTATGGTATCTGACCCAGACTCCATGCT GTCACCCCCACCAATCACCCACAGTAGATCCTTCGGGGACTACCGTTCAGTAAGCGGTGCACGCTCTCCC ACCCCACAAAAAAAGTTCCATGCTGCCTCCTCCTCCTCCCAAGCCGAGTCCCGCAGCAAGGGCAGACCAA GACTGAAAATCCCTTCGGCTGACGGGCGGGGATCGCGCACCCAATCCCCTGCTGCCCAGAACAGAGCTCG TGCACGCTCCTCATCCCCATCTCCTCCTGCTCTTGCTAATCAATGTTTCACAGATTATGACTCCTCCTCT CCTACCCCACCTGTCTTCTCTCCAGATGCCCTCTCTGAACCTGTCTATAATCCCCTCCCTATGCCCACCA ATGCTTTGTATCGTGAGTCTGCTTCACCTGTCTCTTCTCGTAAAAACCCTCCTTCTTCCCGGGGCATAGC AGATACCATGGGTAGAATGACAGTGACCGACGGTAATTACGAGGATGAGACTTTCCCCGAAGTAGATCAC CAAGATATTCTGGTTCCTCTTTTGACTGAGCTGTCCAATCATAATGGAAGGTTTGAAGAGAGAAAGAATG CAATGATGCAGCTAATCCGTCTCACCCGGTCTGAGAGCCTCTCGCTTTGGGATGATCACTTCAAGACGGT GCTCCTTCTTATGCTGGAGACATTAGGAGATGTAGAGTCATCAATCCGAGCCATGGCACTGCGTGTCCTT CGAGAGATCCTCCGGAATCAACCTGATCGCTTCAAGGACTATGCTGAGCTTACAATCCTCAAGATATTGG AGGCACACAGGGATCCACACAGTGAGGTTGTAAGACAGGCAGAGGAGACTTCAGCCACCCTGGCTATTTC CATTGCTCCTAGCCAGTGTGTCCGAGTCTTGTGTCCTATCATCCAGACAGCTGACTGCCCCATCAACCAG GCTGCCATCAAGATGTTAACCAAGGTTGTTGAACTGATGTCAGAAGCAGACGTACTGGAAATCTTACCCG AAGTGATTGTAGTTCTACTCAAGTCGTATGATCACACTGAGAGTAGTGTCCGAAAGGCCAGCGTCTTTTG CCTGGTGGCCATCTATAACATCATAGGAGATAAACTCAAAGAGAAGCTAGCGGACCTACCAGGGAGTAAG ATGAAGCTGTTGAACCTGTACATTAAGCGTGCTCAAGCCGAGAAGGAAGCTCAGACACCCTCTCCCAGTA GTCCTTCAGCTTTATCCACTGGCAGCAGATAGTAGCCGTCCCAATATCAGACTGTACGCACTAACAAACA CATGCCCCTGTGGATGGGACTGTTATTAGAGACCTGAGCAAGAACTCTGAATCGGTGCACCATCAGGATA CATTTACATGCCATAAGTGTGTAATGAATTCAATAACCTGCAAGCACTCTTCTCAAGTAAATGTATCCGC AATTAGCTGACCCAGAATCAGATTGTCACCCGCAGCACATATGGGAATCAATGGATGGGACTATTAGGAG AGAACTGATCAGGAATTCTCACAGGTAGTGCAACATCCATGACTGTAGTATAGGCTGTTAAAGTGTGATC TACTCAGAATCCCATCAGTTCTCTCTTCTGGTAGTAGAGAGTAGTGGATCAAACTATGTTAACTAACACA TACTCCTTAGGGTGGGACTGTTAAAAAGACATGATGAAGAACTCAGCTACTTAGTCTATTATGACACTGC ACTATATTTATGTGTGTCTAGCAACATCTTTGAAAGCGACAGGGAATTCTCTACAGGTTTTCCTTCACTG TCCGAAGATCAGACTTTGTAAACCATCACACTCGCACGCCTGCACCCAACTATGGATAAGACTATGGGCA GAAGTAAGGTGATTAGGGATTCATGTGCCACTGCTTAACATGAGACTATGCGAGCTGTCTGTCAGGATCT CTTAATAATGCACATTCTAAATCAATGATCTCATCAGGATTTCAACCTTTGTTTAGCTCCCTCTTAAGAA ATTAATCAGCTCACCTGCTGAGAGCAAGAAGGTCACTAACTCTATGCAAGTGTATGTGATTAACTCCCTA CTGGTTCTCAATAGAAAATCCCTATTTGTCAATGCCACTATTGGCCATTGTTGGAAATAATGTCAATATG TTCTTTATGAGAGGCATGTATAAGGCTACAAGTCATCCTTTCTAAAGGCTTTTAAGGTCACAACACTTTG GAAAAGTCATCAAAAGTTCCTGCAACAATGTAGCCAGGTGCATACTTGTCAGTATACATTGTACATGAAC TTATGAAAATAGATCAATGCAGTTATGGATTACAGAAGATTAAGGCACCCTTCTATAAAAGTATTGAGTG CATGAGGTACATCTGTACTTATGTAAGGTAATATTGCGCAAAAGATAGGACATTAGGTGGTATTGATTGA AACTTGCGACCCTTGGTGAGCAGTTGAATTTAGGTAGCTAACAACATTTTTGTATGAAATATTGAACCTC ACTGCCATTTATGTCAAAGCTGTGGTGATTTGAGAACAATCTCTTAAGGGAAGATGAACTATAGTGTTAT TGGCTGGCCAAAGTTTGATCATTTGTATTCTTGATATTATCAAATATAAACTCATTATTCTTTCATTTTG ATGACTTTTTTCTCAAGGAAACTTTTAAAATTGACTAATATACTCAGATTGAATTAATATCATTCACAAA TTGAAGATTCTAGAAGCAGTGTACCAATTGAACACGAGAATTTAGATATTTGATAATAGTGAAAAAATTC CAATAGGATATACAAAAATATATGACTCACAAATAAGGAGAGTGTTAGCGGGCAAGAAATTATCATTATT ATTCATATTTACATAATGACAAACACATATCTTTGGGAAAAGGGGCCTCCTTATTATATTTTGTATGAGA AAGTTGGCATCATTATTTGGGGGAATGAAAGAATTTTTGATTGATTTATTTGAGGGCCAAATCAGGAAAT TGATAGAGCAATGGTTTTCAGTCCAATGTAGAATGGTTTTGAATAATGTTGAATTCTGGTCATTTGGTTT TGATGTTACACGTATCTGAAATTAACATGTTTATGGTATAGACACCAGAAAGATAGATTGAAGGAAATAT GTATATAATTGCACAACGAAGAATGATTTGGGCACTTTTCGTCTGTTTGTTCACATACATAATGGTATTT TAGCAAGCCTTTGAAATGTCAAAATTGTATTTATTGTATGCTATGATAAAAAGTATAACAACTTGGCAAG GACACAATAAATGTCTATTTAATCAAGAACAACTTCTTCATTCACCACTATCACAACCATTTGCCCAAAT GGTATTGAAATCTGGATCAATTTAGCCAAAGAAAAACATGCAGCCCTTTTTGTCCCCTGCTCATATGTTT CAATGTGTATTGTTTATTTTGTATTATCTCTTTTTGGTCAGGAGATTCATGGTATAAATTCTACATAGCT TATTTTTAATATGTGCCTTCACGGTTTTTCATCTCAAAGCATCAATGGACATCTGCTTAGGATGGAAGTA AATTTTCACCTTCGCCGCGATCAGCAATTTTTTGTTGGATTTTTTGAGAATTATATGCATTGCATTAAAC CTGTTGATATTCATCTCATGGTTATATTTGTTTTTATAAATAAAATCAAACAACATAAGAGAGGGTTTTA GAAAAATTCTAACAGAATCCAACAAAAATCGCTGAATACTCATCTAAAACCCTCTCTGTGTTATTAGACT TTATGTATAAAATAAATATAAC
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???blast.numalign???
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???blast.numalign.1???
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???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds