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Echinobase
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Echinobase Accession
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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???blast.header???
Download BLAST databases
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???blast.program.blastp???
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030972412.1 PREDICTED: Strongylocentrotus purpuratus nuclear receptor ROR-alpha (LOC100893600), mRNA TCTTTCATTATTATACAGACCAAGGAAGAGATCTTAACACGATTATCAGTCCTATTAGGCAGTCAGTACG AACGCATCGTCCAGTTCGCAGAGTCCATACCAGGCTTTGGAGAATTTAGTAAAGAGGACCAGAGAATTTT ACTACAAATTGGGGGTCTAGAGGTTATTCTGTTGCAGTTATCTCAAATCTATGACCACAAGTCAAAGTTA CTAAGAATGTGGGAAGGGATGTGGCTATCACCTGAACAAGCCAGAAAACTTACAAGTGACTTCAATCTAG CAGTGTTCTTTGAGCTTCTGTTCAGCCTGGCAGAGAGCCTTCACGGGATGCATCTCAGAGAAGAGGACAT CGCTGTCTTCTCTGCACTCCTGCTTCTTGCCTCAGATCTACAAGGACTGAAACAGAAGATGCAGGTGGAA GCCCTGCAAGACAAAGTACTCAGCGGCTTTGCCTACATGCTGTCTCAGAACCATCGCTGTAAGCCCAATC TCCTACCCCAGGTTCTCATGTGTATGCCAACCCTGCGAACCATCAGCACCAGCTATCTGGAGCTGACAGC AGTACCACGTCACACCATGGTGGTGCCGCCACCACCGGACTCGACAGCCATGGCAATGAGACTGTTCTGA AGTCGAGGGAATGAACTAGATAGGTAGATAGTATGTGTGTTGATCAGAGGAGCCTTCAAAGACTACAAAG ATATTGGGTAACATCATCTGTGGGCCGGGATTCATCCATGGAGGGCAACACACTGATGTGGTTATCAGGT AGCAGGTTTGTTCAAAAGATGGATGGGATCTGTCTTGGAGCAGTGTCCAAGATATCGTGAACATTGGTGT ATAGAGGTGAAGGCAAATGCCATGTGGTTCACCAGAGCTTTGGATTCCTGGTTGGACGAGTGAGGAATCC CAAGAACAGGTCATAGGAATTCTGCAGAGAAGCCATTGTTGTGCACACTCAGAAAAATCCCTCTGTCAAG CAGAATCTTCACAAGAAGTCTTTGCTGTACCCAAAGGTACAATGCACTGGCATTGTCTGAAAGGCCACCT TGTTGAAGCTGTAATGTTGAAGCTTAGTCGACTGCTTAGCATCATGGTGGCTTCGGAGTTTGAAAAAAAG TGGAGGACAACAGGAAATGCACCAACTTCAGACTTGGATGAATATCAGCTGGTCTGCATCCAATTAACTA ACTCTAGGAACATTCATGACCTAATTGGTCGCCATAAGGTAAGAAGGAGTCTTACATAAGGTTCCTAGGA GGTCTCTCTTCCAAGTTCTTCAGACGTGGGCATTGGGATCACTGTTGCATTTGCATATGAGGATCACGTT CAAGTACTGCAGGGTTGGACATCGCATGGAGAAAGCCCTGGCAGAACTTTATCACTACCAGATCTTAAGA GCATGTTTAAAGGAAAAGAAGGGCGTGGTGTGATTTATCTTCTCAAGATGAGATATCATTTGTTAACAGT GATGATTGAAGGTTTGAGTCTGCAAAGTAGTACTGAATCATCAACCCCAGGTTATGCTCTCAGCAGCACT GGGTTTTACTTCTTCACAATGGATAGGCGATTTTTCAAGTTGAAAGTCTGATTTTTATGCATAGATGTGT GATTTTGAGCCCGAAAGGGCTTTGTAAGCAATAGAAAACAGAAAGAATTCAGGCCATTCTGAAAGTGTGT TGATGTAAGCCAGTGCCCTTCTAGCACCAATAAGTCAGTGATATGTAAGATGAAGAAAGTTTCATGTGTG ATGATTGTTTCAATTGGAGCCAAGTGCGACCACTTTTTTGTCAGCACAGCACAAATGCACAGAAAGGGAG CAGGGTAGAAATGTCTTCTTTGGGGGAAAAGCAAAGAATTAAGTCCTTTCAACCATGGTGAGGTATCATC ATAAACAACCTTAAAACATATTGGGAGATAAATCAATTCCATTCTGAGAGGATAAAAATTTACTTCAGTA AGGTATTGAATTCTAATTCTTAAGATGAACATGGAACAGAACATTTTAATTGTGTATTGGGAGCACTTAA TATGTAGCTATTCAACACCTTGTTTTATTTCACTTGGTGCACCTTAATTTTCCGGTTAATTTTGTTTTTA CTAAAAAAAATTTTGCTGATTTGACAATGTAGTTCTATTCAAGGATATTTTTAGAATTCAAGATTAGATT AAGAGATGCAGATTATGTTGCACGTGGCAGACAATAAATTCTATCAAAAAGACATCTTTATTTTGTGTTC ATCCTAAGACTTTTAATAAGATCAAGAATCAATGCCCTTTTTTCTGATTTGGTTCAAAAACTTTGAATGA TACTTCTAATCATTACCTCCACCAGTTCCACAGGGTATCTTTCAGTAGAGGAAGCTCCTATGTGTTTAAC GTGATAGATAGTCACCTAGAACCAGTACCATTAGGAGAGTTCAGGCACAATATGATGAATACTGCTATGT TGGGCAAGCACACAACAAAAGAGTATATGCCATGTTGTGACCAACTGTAACCAAGTTACCGAAGCTCTGT GTATAGATGGCATTAACTAGAACACCCCTACACCTCCCCAACTTTCCACTTTTAAAATGACGTAAGAATG ACTTGATAAGAGAAGCACAATATGAAAAGGTACCAAAAACAATGTTATTATATATTGTTTTATATCATTT ATTGTACTGTAAAAAGTTTTATCAGTGGCCAAGTTGTATAATATTTAAAATAGCAGTGTAAATAGTGAAT AGCACATATAAAAAAAGGACATTTAAGATTTGAAATTCTGAAGAAAAAAATATTTGATTATGTATTGATG AAAAAAGACGGCCTTTTTCGCAGAATGCGTCTGTGACTGAAGCTCTCAAAATCTGGTCTCAATATATTGT TTTCTTTATTCTATCTTCATGGGTGAGAGTAAGAAGAGTGTATCGAAACGAGTATTATTATGTTTTGCAA TGAAATACCTTGTTTTAGCTTCCCTTTGAAGTGTAACCCTTGCTTTGTATTTTGCTCTCCAGTATTGCTG CTCAGCAGAGCTAGTGCATGATCAGTCTATTGGAGCTCATACTAAACATAGAGATAAAAGTGTTGAATTC ATAATTAAAACCCACATGCTTCAAACAAATAACCATATCATATGGCAAGAAGGTAGATTCATACTAAAGT ACAATTTGATTCCTTTCATTTTGCTTGTTTTGAAATTGAAAACTGAAATATCTGGCTGAAATGACTGGTG GAAAGTTTTAACTCAAGTATGTTGTAACCTGTTTGAAAGAATACCACCTATTATTGATGGAAACAAAATC CTCTTTGAGTTTTATATGAACTCACAATGAGCTACCACATAAAATATTGATTTGCCTTTTGTAAAATATT TATTAATAAATTTTCTAATTGGTATTCAATTGAAAGTAGCCAAAGTAATATAATAGGAGTAATAAAAAAA ATAAGCACTGCATTTCATTGTTTAAAATGAGTTTGAATATAAATGTTTCTTGGTTTTCCAATATTTATAA TGTTATGAATAACACTTTTGTGATAAGTTACAAGTATTTTTATTTACAAAAAGCAACACTCCATTTCAGC TCTCGGAGGCAGCACCTGACTAATATGCACAAGCAATTAAATAAAATTGCTCATTTTCCAGTGATTAATG TGGACGGACCTTAGTGATATGTTGTCGTAAAAGTAATTTGGAAGGATTTCAGATTGCTACCTGTAACGGG AAGAAAAAAGACTCAGGAGGAATTAATTTTTGTATAACTTGTAGATGAACTAGGTGATACATGTATCTCT TTATTGACTTCTTTTATTGTTACTAAAAATGAACGAATCATGGAATGAGCCTGTCATCTTTTTTTTCTTA TCTTTTTTTCTGATTATAGTCAAGAGGATTTGATTTGATCTTGAATTGTGTCTGATGAAAGAAATGCTGT GTCTATTTTTTTATACATCAAGTCTACCTACCTAAACCGAATCTGTTTTCATGTACCTTCATAAAAACAC ATGTCTTCATCATTCTTCATGAATTTCTTTTGTCTACAATAGAGGCTGCATACATGAATGCTGCAATGTA TAAAGTGACTGAGGATTTGTTATTTTGAACGATGTGTGAGAGTAAAAAGGCTATTTTTTAGATTTGAGAT GGACGGGGAGTTCAGTTTTGAACTTCACAGCTGCTCTATTTCTTTATTTCAGATTATTTCTCTTCATGAA CATTTGTGGCCCGTTACAGCACATGTGTTAGGCTGAATTTCTACTTGTTTGTATCAATTAAGCTAAAATT GCAGTTCAACAATTTATGATATCCTTTTGACATATATATTATTGGTGTGAAAATCTGCTCAAGTTTCAAT GGTTTTCCAAATATTTTCGTAGTAGCTTTAGGATTGTTGTTTTAGCAGAAAATTGTTTTGTCTGCAACTT GGAGGTGTTTTTTTTGACAATGTTGATAGATAATATTTATTAAGATCAAAAGACCAATAAGTTGCATCAA TGCACTTCTGAAAAAAATCTTTCTCTTGTAAATTCCCCTTTTTTGCCCTTATTTTCTAAAAGAAAAGGAC CAACCCATAGCGAAGTATTTCCATTAATATATATATACATATATATATATATACCACCCACTTTTCACAA ACACATCAATTGATTATGTATGCCATATTTGATGATTATGAGATGCTTAAGCAATGTGTTTAAGGATTAG ATATGAATTGAAGTTATGCCTTTTTAAATAATTTGCAAAAGCTCCACAATCAATAATTAGATATGACTTA AAGTCATGCCTTTTTAAATGCTTGATTGTCAGAAGAAAAAAAGTGCATTCACCAAGTAGTTTTGGGTTTA AAAAAAAAATCATTTCTGGTACATTTTTTATAAATTTGTGATGTTTGCTGGAGGTTCTTTAAGATGCTAG TGCTGGAAGTGGTCATGGAGGTCGTTTGTTGCCCAAGTTGTTGGGCATCTCTTTTGTCCTTTGCCTATTG TTGTCACATGGTTCCAATTTGAACGTGGAGCCAAGAAGGGATATGAATCAGGAACTATAGGGTTTCTTTG TGGCATGGACAGCTCATGGTTGGTTCCTGGAATGTAGACATTCTTGAGACAGTGGACATGTTTCTGTTTA AGAAATGTCGTTTATCCCTCCTTTCTCACGCCCCTACTTTCCTCACATTGAAGTTAAGCTTTAGAGAAAC ATAATGGAAGCCGCATGATTAATGCTCTAAGCAGGGACAATTTCAAATCCACTTTGTCCTTTCAAATCTG TAAATCTGCGGATAAGAATAATTAAAAAACAATAAAAATATTCCAGTTGTGTGTAGAGATATGACTTTCT GTATGTGCTGACAAAGTGTTCTGGAAATCATTTCCCTATAGCTTTAGTTTGCAGATGAAATTGCCTGGTG TCATTTTACACAAAATTGAATGCATTTGTGGCTTCAAACAGATGACTTTTTTAAACAGTATTCTCTCTTG AAGGAATAATACAAATAAAAAATAAAAAATTGGAAAAAAGGCAAATCATCTACATCATAACATCCAGAGA CAAGTATTATTTGAAGAAAATATACTGTACCATATCAGTTTGAAATTACAGTAATCCATGGTTCTCAGCT ATACATGAACAATCCATTAGGCATTAGTTTATCGTTGCATCCACATATTTCTCTAATGGTTGGATGCAAA TGTACACGTTAGGGTTGGAAGGCAGGAAATGATGCATCCTCGAGTGACCGAACACAACACCGATAGATTC CTCCCTTGTTTTACTCCCATGTTGTGATGCGAAGGAAAGGGAGGTGTGAGATAACGCTTCTGGGTCGTAA ATTTGAAACGATTAGAGCCGAAACTGATCCCGCTATGAATTCTGTATCATTTTACCATGATATACCATAT CCCTCCATTTGGATGATTTGCTTCTATTTTGATCTATAAAAAGCAAATAAAAACTATTATCTCTTTCTCT TTTTTGTCATATTCCTCACTTATATTCATGGACTCTAATGAGTGTGCTTATGAAAGTAAAATAGAAATAA TACCTACCAAATTGGCATAGCAGAGGAACCTATTTTTACCCAATTACTATACTTGATTCCAGTGTTTGAT CAGCTTTTTCTATAAATTTACTATGCTGAAATATAGTCCTTATTCTTGTAATATTTACTAGATAAAAGAG TGACCTGTTCTGAAGAAAAAATGCTTAGAAGTTTGGAATATTGGTGAATTTTTTACTTGCATTTATATCA TGTTAATATCAAAAATAATATAAATGAATTTAATTTAATTTAACTGTTACTAGTCATTAAACTAAATGTA AATTTTTGATTACAGTCATTTTTCAATTGCACAAGTCATGATAAATGTGAACAAGTATTGAATATACTAA ACTCACAAGTATATTTCTCTTTTCCAAAACCAGCTGATTGGGACACAGGGTATTTTCTTTCATTTTTTAA AAATTCCAATTCCTCTGGTTTATATCAGATTGAGAAAACTTGTAAATATAACATGGATCCTTAGGCTGGA ATACAAATGCACAAAGTAGAATTGACTTATCAAAGACTTCAGAACTAATACAGGCTTTATCCATCCCTTT TGTTAGATATTTATACTAAATACATACACATGCACAAATTGATGTCACCTTCATAGTAATATTTTTCCTA TTAAACACATTTTGTTTTAACTGATTAATTATGTCTGTTATCTCTCTTATCATACTGATCCATAGAATGA TTAATGATTTAAGGTCATTTTTCCCTCTTTTTTGTTTTTAAAATCATAAATTTGGTGTTACATTGAGCAT AAAACTGGATGACTCTTATCATTTTGTACCCTGTTCCTTTAATTCCTCTCTTCAGCAACAACATTTAAGG ATGATAGATGGATGAGGGTTTCAAAAAGGGGGATGATCTTGATAGGCCCCAATAAAAATGTCACAAAATG ATGCATGGGAGAGGTTGCTATTAGAAAGGAATAATGAATTGAAATTAGAATGATTAAATGTTACGCGTTG AAAGGGCCTCCCATTAGAGCCGATGTATACCAATGCACGCTGCAGTATGCAATCATGTAGGTCAAGATAT GTTGAATGCTTTTTGTATGGTCCCATCAATATTCTTTCTTGGCACTGATTATTGAGAAGTCGATTTGTAA GTGTGTTATAGAAGTGTGGGATCAACCTAGATCCTCGAAAAGAAATGATAAGAAACAAGTATTTTCACCT TAAAAAATGACTCCTGTAGAAGCATATTTTCCTATCATTTCCCTCAAGTTTGTGTTGTTGTGTCTATTCT TGTTTGTATTCTTTTAGATATCTGATCAATCACGTAATGTATTTTAATTTGTAGATTTGCCAAATTTGTC AACTAGTATTTTGAATGTACTTCATTGCTAAGACTATAGCTCACTGTAATGTTTATTGGTTGGTCAATCA GGAAATGAATGTATTGGACTGAAATAGGTAAATTGATGAAAAGATAAATTTTAAGAGTGTTGTAAAATGT GTTGCTTGTATTGGACTTACTCTGATAGATTTATCTGAAATTGTATTTCTAAATTATTCTTATTTTCATT ACTATCAGTATGTAATTGAGTAAAAATCAATATATGTGTATATGATAAATGGCAGGAGAGAGAGTGAGAG AGAGGAGACAGAAAGATGATCGAGTGAAATAGTAACGAATTTGTCAGGTCTATTTTTCAGTTGAATTTAG CCAAAGAGAATAGTAGAATCTAAGGTATAGAAACTGGGCTGAAATAATTAAAGACAACAAAATGGCTGAA ATGGTTTTAAATATAAAAGGATATTTGTTTTATATGAAAAAAATGTTTTGTGTGTAAAGTTCTATGTAAC TACTGAGAACAAAATTTTGATATTTTAAACTTGTATGTGTCGTGATAATTCAGTGGGTCACTTGATCCAC TCTGTTTAAAAAAAAAAAGATACATAAATTTATTCCTTTATTTGATCTCTGTCTCTTGTTTTTGACATTC ACTTTTGTTTAAGTAGGATGGAATGATGTAGAGATGTAGGAATGAAACTTGCTAAAAACTGAACCTGTCT TCAACATCTGTGTGAATCTAATACAGATATAACCTCTCTATTTTTATAGACTCAAACTATTGTGAAAAGC ACACTTCAAGTCGTTTCTTATTAACAGTGTAATATATGTCTGTCATTTCTTTTTCTCCAGGGAGGAATAA ATGTTTAAAAAATCATGAATGGTGTGACAGAAAAGAAATAAAGGAAGAAATGATTGTTTGCAAATTTACC TCAGATTTTGCTACTGTGAAAGATTAAAATATATGATTGACTTTGAAAACATAAAGTGTACTATTGCAAC ATAAGAGGAGTTTGTGTTGGCATTGTAGCGAGAAATAGTTCTCCTACTTTGTAACCAAATTCCAGCACCA AACTGCTGTATAAACTGCAAACTTAATTCACATCATGCACATACAAAAGCAAAGCACATCAGTGCCACTT TTATATATGTGTGTATTATTGTACAAGCCTCTTTGTTTACACCTTTATTTTCCCCTTTATGTATACATGT ACATCTAACAATATTTCCTATTCTTTTCCTCAAATTTATGTACAGAGGTATTTCCTTTTTCTCTTTTTTT CTTTGTTGTTTGACTTGAGACCATATTTTGTGCTATACTGTTATTAAAAGGGCCAGATGGAAAAAAATGA AAA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds