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Echinobase
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030972597.1 PREDICTED: Strongylocentrotus purpuratus paired amphipathic helix protein Sin3a (LOC582488), transcript variant X1, mRNA GGCCCATAGTACGTACGTTATATATGCAAATGAGCATAATTGTGTATCTTTCCCGTAAGGATGTTGTATA CGCAGAGTTTTGAACACAAAATCCAAGTAAATCTGGACCATCGGATTATTCTAACTGATTCTTGAGATAG AGGACTCCTAATATTCTTCTTCTGGTTGGTGCTACAACATTATGAAACGCACTGGTGCGGATCCTCAGGA GAGTGCATTCCCGCAGCAGCGAGTCAACACAACAGTGCCTGTCGAGAGAGTGATCGGCAGCCAGCGTATT CCGTTGCCTTCATCTGTTCCTGTCTTTGAGCAGGCAATACAACCCGAGAACATGGCCAGTGGCTTACATT ACCAACCTATGCCTGGATATTCTGTTCCAGCAGTCGGTCAGCCTGTAAGCCACCATGGTGGAGTTCACCA TCCAAACCACCCTCATCCACATGCTGCCTCCCAACCGGCTGGAACTCACCAACAAACGATTCATCAGGCT CAAGCACAGTCACAGGCACATATTGCTCAAGTACAAGGCCAGCAACAACAGCAGCAACAACAACAGCAGC AACAGCAGCAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAGTATCAAAGACTGAAAGT TGAGGATGCTTTGTCATATCTTGATCAGGTCAAGCTTCAGTTTGGAAGCCAACCTCAAGTCTACAATGAC TTTCTAGACATCATGAAAGAATTCAAGTCACAAAGTATTGATACCCCTGGTGTTATCAATCGAGTTTCAA ACCTCTTCAAAGGACATCCAGATCTTATTGTTGGTTTCAACACTTTCTTGCCTCCTGGATATAAGATAGA GGTCCAGGCTAATGACCCTTCACAGATTAATGTCAGCACTCCTGGAAACCCAATTCCAAAGCTCCTGACA GTGACAGGCTTGCAACCCATCAGTACACCATCCTCTGGGCCAGGCAGCAGTAGTCATGGGTCAGTGGTTC AGACCCAGACTCCAGGACCACCCGCACAGAGCTCCCAACCTCAGGTGGTAACACAAACAGCTAAGCAAGC AGCAGGCACAGGCTCCTATGGACAGGCCAGTATTTCAAAGGCAAGCCTCCATCAGATGGCAAGTGCTCTT CCCATTCAGAACCAAGCAGCAGCTGGAGGTCATACCTATTCTCAGCCCCCTCCCGCTGCTGCCCAGACTA GCCCTCAACAGTCACAGATTGGACCAGTTGGAGGTGGGGGAGGAGGAGGAGGTGGTGGTGGTGGTGGAGC GGGTCAGCCAGTAGAGTTTAACCATGCTATAACTTATGTGAACAAAATTAAGAACCGATTTCAAAACCAG CCTGAAATCTACAAAGCCTTCCTTGGCATCTTGCACACCTACCAGAAAGAGCAGCGCATAGTCAAAGAAT CTGGTGGCACCTATCAACCTTCCCTCTCAGAAACACAAGTCTTCAGTCAGGTCTCTAAACTGTTTGAAAA TCAAGAAGATCTCCTGAAGGAATTTGGACACTTCTTGCCAGATGCCAATGGTGCAGTCGGACTAGCCTCC TCCTTTGGATTAGGAAGGGTAGGTGTTCAGGATACAAACACTGTTTCACTGGACAATCTTTCTAGCATTC TTGTGCGAAGTGAACACTCAGAAACAAAGAAGCCACGCCAAACTCCAAAACACAGCAGTCAGGTGAAGAG GCAAGGGCAAGGAGCTCATCATCCTAGCAAGAAAATCAAGATTGGCCCAACTAAAGACATATCTCTGGAT GAAGCAGGCAAACATGGTAGCCTCAGTGAGTTTGCTTTCTTTGACAAGGTGAGGAAAGCTCTCAACAGTC AGCAGGTATATGACAACTTTCTCCGCTGTTTGCTCCTCTTCAACCAAGAAATCATTTCAAGAGCAGAATT GGTACAGCTTGTCAATCCATTCCTTGGCAAATTTCCAGAGTTGTATCGCTGGTTCAAGGAGTTTCTAGGC TACAAGGAATCAGACAAAATAGAGCCTCCTCACCAACCCAAAGAAAGATCTCAAGGAGAATTATATACTG AAATTGATTTCTCCAACTGCAAGCGTTGTGGAGCTAGCTACAGGGCTCTTCCCAAGAGCTACCAGCAGCC AAGGTGTACCGGTAGGACAGGGCTGTGTAACCAGGTCATCAACGATACATGGGTCTCCTTCCCTTCATGG TCAGAGGATTCTACATTCGTTGCTTCAAGGAAAACACAGTATGAAGAACATATCTACAGATGTGAAGATG AGAGATATGAGTTGGATATTGTGATTGAGATCAACTCACACACCATCAGAGTGCTAGAGCATGTATCCAA GAAACTCTCTAGAATGTCTCCAGAAGAATCCTCAAAGTTCAGGCTGGACAACTCGTTGGGTGGCACATCA GAGGTTATTCACAGGAAAGCCATTCAAAGGATATATGGAGACAAGGCAGCAGACATAATTGAAGGCTTGA AGAAAAACCCTGCTGTGGCAGTTCCACTGGTTCTTAAGAGATTAAAATTGAAGGAAGATGAGTGGAGGGA GGCACAACGGAATTTCAACAAGATATGGAGAGAACAGAATGAGAAGTACTACCTCAAGTCTCTGGATCAC CAGGGACTCAACTTCAAACAGAATGATGTCAAGGCTCTTAGGTCGAAGAGTTTATTGAATGAGATTGAGG CAATATTCTATGAGAGACAAGAAGGACTCGGTACTGGAGAGAATGGAGCAGGGTTATGTGGACCTCATCT ATCTCTACCCTTCATGGACAGACAGTTCATGGAAGATGCTTCATCACTCATCATTCACCATACCAAAAGA CAAACAGGCATTCACAAGAGTGAGAAACAGAAGATCAAACAGCTGTTATTCCACTTCTTGCCAGACCTTA CCTTTGAGGAGCGAGGAGAGCTATCAGATGATGAGGATGAAGATGAAGATATGGATACAGACGAAGGAGG AGACCAGTGTTCAACAAAGGATGTCACGGAAACTAAGAAATCAAAAATCCCCAATGGCCCTCTGGAAAAG GTCATTTGGGAAGCTCCGGACTCATATCGTATGTTCTTTGTGAACAACAACTGGTATCTCTTCATGAGGC TGTACCACATCCTGTGTGAAAGGCTTGAGAAAATGAAGAAGAGATGTGAAGTCATCATGGAAACAGAAGG AGGGTTGAACAGGAGAGCTGCCAAGGAATCAACTGCATTAGCATTGGGCTTGAAACAACCACAGATGGAT CCGAGTGAGTACTACAACACGCTGTTGGATCTGATACGTAGTCTCTTAGATGGCAACATTGAGAGTGGTA CATATGAAGACCAGCTGAGAGAGATGTTTGGTATCCATGCCTACATGGCCTTCACTCTGGATAAGGTTGT CAGCAATACAGTCAGACAGCTCCAACACATAGTGACAGAAGATACATGCATGCAGGTGACGGATTTGTTT GTGAATGAGATCAAGTCTGGGGGTACTGGGGGAAGTCTTGCCACCATGCCAGTCAGAGCAAACGCTGAAG CCCTATACCAACGCAAAGCAGAGCAGCTGCTATCTGAAGAGAACTGCTTCAAGATCACATATGCCAAGCT TGATCGCAAGCTGTGCATAGAGCTGCTAGACACAGAAGAAGATCCCAGCGATGATCCAGTAGAGGTGGAT AAATGGGTGGACTATGTGGAGAAGTTTGTCCTCTCTGAAAGCATCTCACCAGAACTCAGAGATCAACTCA CCAAGAAACCTGTCTTTCTTCCAAGGAGCTTACGAAAGACTCGCCAGCAGTCACTCGAAGAGGAAAAAGA CACCTTTCAGGCGGACTTCATCGCACACATCCTGGCATCGGCTCAAGAAGCCACACCCCCTCCTCCCCAA GAAGAAACAGACACCAATCAGGACATGCTAAAACAGAATGACAATTCACAAGACACAGACTCTAGCACAG AGACAAAATCCACCGGCGGCGGCGATCCCAATGGGAAAACCCTGGACAGTGTGCTGGGAAGAGAGGGTGC CACCATGAAGGACGGGAGGAAGATACTGTCCAAGGTGGTGACCAAGGGGGATAAGAAGACCGAAGGGAGA GTTGTGGTGGGTGGTGTGATGAATCCCCTGGAGGGAGTGGACATGGTCAATAACATGGAATGCAAGTTCA ACCTCAACTCCTACAAGATGGTATATGTTGTGAACTCAGAGGATTATATGTACAGGAGAACCTCAATCAC CAAGGCAAAGCAGGCCCATCCCAAAGTCACCGCCAGGTTATCAGGTCGCTTCCGTAAATGGGTGGACAAG TGGAGAGAGTCTAATGTGACTGATTCCGAGGCTGAGGCTGTTGAGAAGTGGTTTATGGGGGAGATAGATG ACTTAGTGCCATGTCAGACTATGAGTTACCAGATCACCAGCTCCAACGGAGTCCACAGAAAATTCAAGGT AGCCTACCCAAAAAAACCTGAAGAGGAACCCATCGAAGAGTCGTGACTGCCACTGGATTCCTGCTTAGAA CTTTGAACTTTGAACATGATACAAGCAGGCTGGTGTGAGTTGGAACATTTCTCTAGCGTCAACCGCTGAA TCATGTGACGATGTGACGCAGTAGTATTACTCCATGAGACTTCAAGTGTATTCCCTCTTGAGAACATCTT GTATATTAATATTTTGGAACAGTACAATGCTCTTTGTTGAAAGTCATACAAAGATCATTTCTTGTTTTAT TTATAGTAGCCCAATTAGCTTCATAGGCATGTAGTAGCTCTTGCCTTATGTAGAGTGAAGCATTTTTTCC TTCTCATTAACAATACAGTTTAAGTTGACTTGCATATTATGTCTGAGTGGAGTTTCAGGTCTAGATTGTT GTCAATGTGGGATGGAGACAGTAACGTAAGTGACATGTGAAAGTTATGCTTATAGTTTCTCTGTACAGGT GGTTAGGTGTCCGGACACTTATCAAACATAAAACCTTCTATTTTGCCTTCTGATTTACTGAAAAATATTT ATCAAATAGCACCAACCATCATCGATATTTTTCCTTAATAATATTGTCCAACATAGATCTTACAAGATTT GTGAAATATTGCTTGTAAACTTCTTCAAATTTCTGTTTTAAACCAACTGTCTGGATACACAACGGGTGGG TATATGTCATTTTTAAAAGTTTTCAACAAAAAGACATAAAATCCCTGGTTATGACATTACAGACATGATC AGAACAAATAAATGAGACTTGCTAGTGTTAAAATGTATGAACTTTTTTTGTATCAAAAAAATGCTATTGC AAGTAAAATGTAATCCAATATTTTTATTTATACATTTATAGCAAGATATATTTGAATACTATGGCTGCAT TTTTCAGAAAATTTGAAAAGGACATCATACATTCCAGGTCAGTATAGGAACCTACCCACATGTAGTGTGC TCTTCGTTTTTACCTCCCAACTCGTTACTTTTCTTTATCATCCCAATACACCAGTTTACAGTTGTATCAG TGCGCATGCGCAGACAGTTGACCTCGGGTCATTGGCCCTGAATTCAGGGCCAATGACCTTTGACCAGTGG TATTGATGCGTAAATGAAGATTGCGCCCATGCAAATGATGATTTGCGCGCACAACGCAGCGCGTAGGCAG TGATATCATCATAATTTGCATGGGCGCAATCTTAATTTACGCATAAATACATGACCTTTAGGTCATTGGC TTTGTGTAAAATGGCGCACACAACCGTAAACTGGTGTATTGCAATTGTTTTTCCCTGTCTCTCACATTCT CTTTCCTCAATGTTTTAGCACTTGAGTTCATTTACCTGAAAGCTACTGTTCAATCACAATGTCCCCCTCC CTCTCCCCCTCCTTTGGTTTCATGTGAATGAACTACTCAATTTCTCTCCACAAGTTGAGCTTGTTCAGAT ATGACTCTGTATGGTATTGCTCAAATAGATCAAACTGAATCCATTTAGATGAAAATATCAATTCGATGAT CAGTGGGTTCGTTGTAATATTATCCTAACCTCCAGAAATTTCAACAAAATGTCAATTTGATTGAATAGGG GCATGAACTGGCTTTGTCCTGGTGACATAGAGCCACCACAGTCATGATTCCCATAGCTTTACCCATATTT TCGTTTTCTAATAATAATTGGAATAAATATAATGCAGAAGAATGCTGCATTATTGTAACTAGGTTTCCTT GTAGTAGGTCGGAAATGTGTATATTTGAGGAATTGGA
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds