Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_011666197.2 PREDICTED: Strongylocentrotus purpuratus diacylglycerol kinase beta (LOC580494), transcript variant X1, mRNA AGTTTGTGATTTTCTGAGTTACTGTGTGGGCTGATGTTTACGGTCTCTCTCTCTCTTCCAAATAGTTTGT GATTTGTGTGGGCTGATGTTTAGGGTGCATTAACATCGCAACAGTTGTCTGCTACCTTTGACATATGTCT CATATTGCTTATTTTTCATAACTTAAAAGTCAAATTGGATTGGAGGGAGTGGTTATAGCAAAAGTCTCCC TCACTCTCTCTGGAGAGCTCAGCCAGGGGCATCAAAGCTTTGCAGGTTCTATTTACTACTTCTTCTTTAA CCTTGTATCAAGCTAGCAGCCAGAAATGTGCAGCTCTTTTATTCCTTCCTTGGAACAATTTCTTCTTCCA ATTTCTATTTATTCAACAAAGGGAAAGTATTAGGATCCAATTGAACCAGAACATTGAAGGACAGCATCAC AAAAACAATTCTGAAGGACTTTAAAACCAGACTGAATTCGACGAAAAAGGAAGGATTTATGTGAAATCAA CGGAAGAGCTTTCCAAATTCACTTCCTAGACAAACAATAGCTTGAATATTATTAGACACCTTTCTGTGGC TTTGCTTGGTCGTTAGTCAGGGCAAACGCAGGCTACCTGCAGTATATACAAACAGTGCTGTTCATTCCGA TGCATGCCAGCCAGCTAGCCAGCCAGCCAGCCAGCTAGCCACTCAACGATCTGGTGTGTTTGAGTGTGTC GCTGCTACACACATCTCTGTCACTGCTAGCCTGACCACCTCAGTAGAAACATCTCAGCGAAGGAGAAGAG AGGAGAAGATCAAGAAAAACCTGGGAAAAAAAGTGATGAAGGCTCCCACATTTGTTGATCAAGTACATAA CAGCTGCTTACTGGAGAGCTACAAGTTATTTGTAATTTTGAATGGAATAGTGCATCAGAGCAGAGCAGTT GATCATCTTGTTGTTTAGTGAATAAATAGCAGGAAATATTACCTTCAATACAGGCTCTTACCTTAAAACA AATTTGAAAAGATAAGAGAGCAGGATAGAGCTGGAAAGGGGATCCTTTTACAGTGTATGTAAGCACTTCA ACTTGCGTTTATTTTAATAGCGGTGGATGTTTTTTTTCCATTCTCATTTGCGAAGCACCATCTGCAGTTC AGAGGGAATAATTCTGCAATCTTGTAAATTACAACGCTGCTGCCCAGGAAGGATGGCAATCTAACGACTC GCAATAAGTGGATTCCCTAATATCGCAGGTGCATCCCCTCTCTCCGTCTCTCTCCCCTTCCCCACCCCCG CTATCGTCCCCCGTAGACTGACCAACAAAATCTTCTCATTTTGCTTGTTGTGCGTGGTTAGAGACAGTTA ACAGCGCTCATGAATCGCACATGCCTGCCATACATCAACAAGCCAACCAACTTAGGCCGCACTTCAAATC TCTCTGCTTGTGTTTGGAGAATCCTCAAAAATGGCGATGTGAGGTAGCACGCCAATTTCTGTGAAAAAAC AACCACTATTCCGTCTTCCATTCTGTGGTGTGAATATATTTTCCCCTCTGTACTTCACTTTTTGCATAGC CTTTATTTTTTTTAAACTCCTTTATTTTTGTTTAGATGAGGGTTCATCACTGGATTGCCAAAAGACGAGC AGATGTTTTATATATTCTCAGTGGAATTTTGTTTTAAGAAGAAAAAAAATTCAGAATTTCATGCTCTCAA TCTCACCAACAAGCTACACTGCCAGCACATTTCTTTATCATTACTCATTCGAACACACTCTCCGTCATAA TTTGACATTTATCGTGAGCATTCCATCTTGCTGTGAAAAACCCTACTGCCAAGATGCCTGCTTGTAAGGG AACATGGCCTTTCTCTCAGTCCTATGCCTCCCTCGGCCAAACGGACCAAAAGAGACAGAACTCCAAGAAA GAGCGACCGAGCTGGAAGTACCGTCTCTTTCGCAACTCCAAACGAGGCCGGCAGAAAAAGGAAAAGGATA ATAGGATTTCGAAACCCCTTTTTGTGCCTTGTACCTCGGCCCTTGTGATGGCGCTGCAGGGCCAAGCTCA GGATGTAGTGGATATCGTCATGGTAGATTCAAGGAAAACACTCAAAGATGTTTTAGAAGAATTCCATGGA AATGGAGTATTATCCAAATACAACCCCGAGCAGCCCATCAACTATGAAGGCTTCAAGCTCTTCATGGAGA CTTACCTTGACGTTGACATGCCAGAGGATCTCTGTCGACACCTCTTCCTCTCCTTCGTCAAGAAGACACC TTCCGTGTCCAGGTCTACAAGTAGAGAGAAGGAGAGGGGCGCCATCTATGATGTCGGCAGTGCCGTCGCT ACCGTGACCACCACCGCCGCGTGTGCCGCCATCACAGGGAGCAGCTCGCCGATTGAAATCGCTGGGCAGA CGAGCGGCGGCAACAACAACACAGAAGGAAATGAGCTCACAAACGGTCATGGGCAGGAGTCAGGGGTTGT CACAAGAGGGAGCCCCACCCAGTCACGGAGTTCATCCAAGAAGTCCAATGCCTCTAACGGAACCCCTTCA AGTCATTCCATTCGCACCGATGCACTCAGGGTCGAACAAACCACTAATGATCATGGAGATATCAAGAAAG GGAAATCCATGGAGAACAATAGGCGGAAAAAGACAGCACTCTTCACCGCCCTGCGCAAGACTAAAAAGAA TACCAAAGACACGGACTCACTAGGGGCATTGGCCGCCTCCCGGGGGTCACTCGCACATCCAGATGTCACC AACCAGGTCGTCTACATGAAAGACATCGTCTGCTACTTGTCGTTGCTAGAGGGCGGCAAACCAGAGGATA AATTAGAATTCATGTTCAGGCTTTATGACACAGATGACAATGGTATCCTTGACAGCAGTGAGCTGGATTG TATAGTAAACCAGATGATGCATGTAGCTGAGTATCTAGGCTGGGATGTCACTGAATTAAGACCAATCTTA CAAGATATGATGATAGAGATTGACTTTGATTCAGATGGGACCGTATCGTTAGAAGAATGGATACGTGGCG GCATGACAACCATTCCTCTCTTAGTTCTCCTTGGCCTTGAATCAAATGTGAAAGATGATGGCAGTCATGT ATGGAGGTTAAAACACTACAACAAACCAGCCTATTGTAACCTCTGCCTCAATCTCCTTGTAGGGTTTGGA AAACAAGGTCTATCATGTACATTCTGCAAATACACGGTTCATGAACGCTGTGTACAACGTGCCCCAGCCT GTTGCATTAGTACATATGTCAAGTCAAAACGGACAACGAATTATCGTGGCAGCATACTAGGAAAGCAACC CAAAAATCTGTCACGCAAGGACGCCGAGGTTTGGGGAGAAGTTCCGATCATGAACCATCACTGGGTAGAA GGTAACAGCCCGGGTAAATGTGACCGGTGTAAGAAGTCGATTAAGAGCTACAACGGTATTACTGGCCTTC ACTGCAGATGGTGCAAGATAACGCTCCATAACAAATGTGCCTCCCACGTCAAACCAGAGTGTAACATGGG AGAATTCCGAGACCACATTCTACCTCCTACGGCTATCTGCCCAGCAGTTCTGGGAAGAGTCAATTCCGTC AGAAAATCATTGCATGGTAAACCACAACCTTCAACAGGTATAGAGGAGAGGAGGAGCACGTTAACACCTA AAGATAGTAATGCCTCAGAAGACGTTTCAGATGGAGGTCCTCAAAGAAGGGGTGTCTGCAGGACAGACTC CATGTCGATAGAAGGTCAAGGGTTACAGGTCACACCTCTTCCCGGCACTCATCCCCTTGTAGTGTTTGTG AATCCAAAGAGCGGTGGCAGGCAAGGGGAAAGGATCATGAGAAAATTCCAGTATCTTCTGAATCCCAGAC AGGTCTATAATCTTGGCAAAGGTGGACCTAATGCAGGGTTAAAGTTCTTCAAAGACGTACCAGACTTCCG AGTTCTGTGTTGTGGTGGTGATGGTACTGTAGGATGGGTATTAGATTGTATAGATAAGCTGTGTATAGAA CCTAGGCCTTCAGTAGCAATCCTTCCCTTAGGTACAGGCAACGATCTAGCTAGGTGTCTCAATTGGGGTG GAGGTTATGCTGGCGGTAGTCTACCAAAGATCCTGCAGGACATTGAGGTATCTGACGCAGTTGAATTAGA TAGATGGCATATAGAATTTAGCACAACGGATACTTCAGAGCAAGGAGATCCAGTTCCCTACAACATCATC AACAACTACTTTTCAATTGGAGTGGATGCATCGATCGCTCACAGATTCCACACAATGAGGGAGAAGCATC CAGAGAAGTTCAACAGCCGAATGAAGAACAAGCTGTGGTACTTTGAGTTTGGTACCTCAGAGACGTTCAC CTCAACCTGCAAGAACCTACATGAAGACATTGATATCATGTGTGATGGAGTATCCTTAGACCTCGCCAGT GGCCCATCACTGGAAGGCATCGCTGTGATGAACATCCCCAGTATCTATGGAGGATCCAACCTCTGGGGGG ACACGCCCAGCAAGAAGAAACAACGCAAGCTGGAGAAGAAGCTCCAGAGAAACCGAGAACGAGATGGTGA CAGCCATTCCACCGTGGGTCTTACGCAGTCCAACATTGACCTCATGTTTGCAAGGCAATCGATAGGAGAC AAGCTGTTGGAGGTGGTGGGCCTAGAGGGCTCACTTCATGTAGGTCAAGTCAAGGCGGGGATCAGGTCAT CAGGTCGAAGGTTAGCTCAATGTCAGACAGTAACCATCAGAACAAGGAAACGAGTGCCAATGCAGATTGA TGGAGAACCTTGGCTTCAACCTCCATGCACGATATCGATAACACACAAGAACAGCACACCTATGCAGAAA GGACCTCCACCCAAGAAGAGTTTCTCTGGGATCAGAAAACTGTTTGGCAAGGGGAGCATTGATGTGGATG AGAGTAGCGATGTGCATCTATAAGACTGTGGAGATGCAAAAAGACACCAAGATTGGATCTGTAAGGATAG CTCCCCAACGCTTCCTCCAATCTCTTCAAATATTGCCTTCCATTCCCGAGTGAGAGAGAGAGAGAGAGAG AGAGAGTGCAAGTATACCACAAGATGTAAAGATGCAGTCCAGCTGAGATGAAGAGTTGCATATCAAATGG CTGCTCCTGTATGGCTGATGATGCTAGTGATGATGATGATGCTGGTGGTGATGATGATGATGATGATGAT GATGGTTGTGGTGATAGAGTTGTTTAAAAAGCAAAAATGGGGTTCATGATGGAAACGACTCTGATATCGG TGTGCAGAATTACGTTACAGATACTTACGCAAACAAACTTTGGAAGAGAGACTATCTGCATTCCATCCTG TGGTTGAGAAGTAGTATTCCAGAGCATGAAACATTTCAGATGAGGAGTCTGGGTGGTGGAGTCTACAATA CATTAGTGCTGTCTGGCACAGAACTCATGAAATGTATTCTGGATGTTCACAGAAGAAATAGAGGAATAAG AGAGTCTTATTCATTGTAAAGAAGAGATAATTAGCTGATGAGGGTTGGAATTGGAGGCAAGCAAGCACTG CAGACTATATGAGCCTCTTAATGCATCTTTTATCAGTGATTGGTATTTGCACTGATAGGTATATGTGCTG ATAGTACACATAGTTGGTGCTGTGATATGGAAAAATATAGGAAATCTCAGAATCTCATCAGAAATGGATG CAAGTAGAATCTTTAAGTTGTCAGGAATTCCACTAGGCTAAGGTATTAAGTTTGGAATAGCAGATAAAGA TATTTTATCAAATGGAAGGTGCAATGCAAACAGATGAACACAAAATGGTTTTAAAGTGTCAAAGAGAGAG TTCATTCCATGCACGATATGTTATTTGAATAATAATCTGAATTAGTCTTCTGCAACAGACTTTTAACGGT GTGAATGAAGCTATGTGCGTTTGTATGATAATGCATGTTACTTCTTATTTTCTATTTTTATCTTGTAAGA TCATGTTTTTCTTTTGATGAATATTTTGTATACAATGTGCTTGCTATATGTACAGAAGAGAAAATGTTAT GCATTATTAATATGTTGTGAATTATTACATAGGATAAACAGTGGTCAATTTATTTTGCAAAATCTAGTTC TGAACCATTTTTAATACATTACAATACAAACGTGAAATGTATTCTGGATGTGGCCTTTAGGGTATATCCA TTATACAATAATATTCAAGTTACTGAAGGAGCAAATCCAACCACAATGAAAACAAATTGAATAATTTGTG TAAAATAAATGACAATACTGTGTTCCAACAATCATTAATTCCGCCTTCTGAAACTGCTTAAAGAATGGGC TTAGTATTTATATTTTTAAAAAGAAGGAAAAAGTTGTCCATAAAATAGATATGATCAAATTTTTGAAGAA TAATATCAACCTTTAAAAAGGCAGCTATGGGAATGATAAAAAGTGAACACCATAAACTCATATCCACAAA GTGCCAACTAATGGTACATGAATTTGAATAGCAAAAAATCTGTTTTTCTTACTTTGTTAAAAGTGTTTAA AGTCAAATATGACTGCAAGTTCCCTGCTTTTCAAGTTTTTATTATTTGAAGTAATATTTATCAGTTTACA AATTTTTAACTTTGACAGCCTTTTATTCTGTTTTAAATATATTTGATAACAAATTTTATTACTGTAAATT GTATTTCAATTGATGTTTATTTAATCTATGTGTATGAATATATGATGGTGGAGGTATTTGCTGTGTGAAA TTATGTAAGATATGTCACTTGTCTTTCCATATGTCTAAAGGGATGTAAATGTGTTTTGGTTTTTATTGAT AATACGTTTTACTCAAAGTATATGTATGTTTCCTTACTTTTTATTTGTTTTGTATAAAATCCATGCTGTG ATGATTTTTAAGTAATACCGCTCTTTGATATCATGTATCACCCACGAATGAAATATTTGTATATGGTTAT CGGTGGAGGGTTGCTAGCCATATTATTTATATAGATTCATTTGTACTCACCCGATTACACTTGATAAATT TAAAGTTTGTATTTTGTTTTTCATTTTTAATTCTGTTACAAATCTTTTATACTCGTATTTATCCACATTG AACGAATGATTAATTGATGTTCCTGTTTTTATTTGATGAGATTTATTAATCTAAATATCAAAGTTAAAAA TACCTTGGATAAGTACCTGTAATTTATTTATAATCAACAATAGTTATGCCTTTTTTTCAGTGCAACTTGG TTTCTATTTTTAGTTTCCAATTCTTAGTTCAGATAGGTTGCAATTTTCAGACAATCTTTACTTTTTGTTT AATTTCATTAATATGTATTGTTATGAATAGCCTTGTTAATATTTTGACAATCAGAGTCTTTGCGTACGAG AAAAGGTTCTTCTATGCTTCATTAATTTCTTTAAATTATTTCGGAAAATCTTTTTAATGGTCTGCATCAC CAAGTTATTGCATTGGTAACAAAATTTGATAGTTACATGTATTTAAAATCATTCACAAGACATATGAAAG ACGTAAAGAAAATGAATAATGGTTGTATTTTTATTGAGCTAGATATTATACCTGGTTACTATGAGCTTTC TGTATGATATCCATTTTATATTTAATTGATATCAGTTTATCCGCTTTGTAGAATTCAAAGCATTATTATT TAAGCATTTGTCTGAGCAGGTTTCAGCAAGCAATTATGCCATTATATTAGCAGCTATAGTAGTAGTGTAT ATCAAATAAGAAAAGTCTATATATGTATATCACTGTCCATATCATTTTATATTATTCAGAAAATAATTCA GAATCTCTGTTTGAATATGGCCTTTATACAAACATTTAAGTTTTATTTGAATATCTCTAGGTTAGATGCG TTGATTAAGTTTAAGATTATATATACATAACGATAGCAGAATGTAAACTACCTTGTATAATTTGGTTTTT TTTTAAGGTACAACAATAGTTCCATCATTTGAATTAATACTTTTAAAAACATCTACAACTAATTGTACTC TGTTTAATCTTTACTGTATGTTATGTATAATTGGTGTTGGGCTTTGAAGTCAAAATCATTTTGTAAACAA AGCTGAGTATAGGTTTTAGTTATCCTTAAGTTTGAAGACAACAATATTTCATCTGGTGTAAGCGGGTCCC TGCCATTTTAGTATGAGATGTTTAAGCACAATGAATTTCTCCTTCTCTCCTTTCTCTCTCTCTCTCCCTC TCCTCTTTATCATTGAAATCATTCAAATTAAGGGAACAAGATTTGATACCTGATATTTCCTTTAAGTGAA TTATATTATATATTGTAGGTGATTTTCACAAAGCTCAAACCATGGACTGTTCTGTCAAGAGTACCGGATA TGTTGCATTGGGAGTCCTCCATTTTGAATTCTTTAATCCACAAATATTATTTACATGAAATGATTTGTGT TTGGAGCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCCTCTTACTGGGTTGCCTTCATCTTTCTTCAAA TCACTGCCAAGAAGTTGTATGCTGTGATGAGAAAGATGAATGAGAGAGAGAGAGAGAGAGAGAAGGTAGG GAAAGGGTTTTTATATTATAGTCTTCCTCTTTGAGAAAAGGTTTAGAAAAACTTGTGTGTGTAAATTAAG AACAAGGCACCTTATAGTAACAATAAGAACCTTTGCTTCATGAGGCGCTGTTCACACACAACTTGGTAAA CTGCCTCCAAATAACTGCTGTGGCAAAATAAACTATTCTACCTGTAAATTAATAGCATGTAGGGTGAAAA AGGTGCTTTACACAATAAAGGCCTATAAAGCATTCTAATTCTTCCACTAAAAAACATGGGGGCATTAACT CATACTTTTACAGAGGGTTAACGCCCTTTTGGCTCTCAACATACAACTTGTCTGCATATTACATGAACAA TATACAACATGTGAGCGTATTATGTCCTTGTATTTTGCCATGGCGTTTTTTAAGGGGGTTTACCCTGCTA TGTGTGAATGGAGCTTTACGCTTTATTTCCAACCGATGTAATAATTATCTCAGATACCTTGAGGTTTGAA TTCATTGTGACTTTTAGCCTGGGTATCTTTTATCGCCTGTTTTCATGAGTCTAATTGATAATATGTACAG CAAAATCTTGACTAGAATAAACAAATGATGGAATATTTTTATGAAGGGTA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds