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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>JT117502.1 TSA: Strongylocentrotus purpuratus WHL22.668582.0 mRNA sequence CGAATTTCAAAAATTGGAAAGTTGCCGTGAGGAAATATTCATAGTCATAAAGTGTCTGATTCTGCATGAT GTCCCTTGATCAACTTGCTCCAATTCAGTACTTATCACAGGACGTTAAAAATCAGCTGAGATCTGGTATA GCCACGCCATCAGTTGTCCAATGTGTAGAGGAATTAGTTGTGAATAGTATTGATGCTGGAGCTTCGTGTA TTGCTGTACGTGTAGATCTGCCAGACTGTAAAGTTCAGGTTGTAGACAATGGAAGGGGAATCACTAAAGA TGATATGCTCTATGTTGGTGAGAGATATGCTACTAGTAAGTGTCATGACACAAAAGATCTTGAAAACATA TCCCATTATGGGTATAGAGGGGAAGCTCTGGCAAGTATTAAGGAGATTTCTTCAGTGCTGGAGATCAGTT CACGAGCCAGAGGGTCTGAAGTCACATACAGCAAACTGTATCGACATGGAAAAGATCAAGGTATCTCAAA GCATTCCAAAGTGAGGCCAAGTGGAGGGACAACAGTTGCAGCTCATAATGTTTTCTATAACTTGCCTGTG AGGCGCAAGGTGCTCTGCAGTCCTCTGGTGTATGAACAAATCTGCAAGCGACTCCAGGCGATATCCTTGA TCCATCCTCAAATCTCACTTACTCTTCGAAATGACAGCACAGGAGTCAAATCAATACAAACACACAACTC TTCATCCATTGTTCAAACATTTGGGTACCTCTTCGGCAAGGATGTAGCAGATTGCTTGAAAGAGGTGAAT CACATTCGCACAATCTTCAACGTTTCAGGATTTATTGGATCAACCAGTTTTCGTAACAAGTCCTTGCAGT TTGTTTATGTGAATGGCAGATTAGTGCTGAAGACGAAAATTCACAAACTCATAAATGAGCTTCTCAGTAA CTCACTTGTTACAAAGAGTAAAGGAAAGAATCAAGACACAGCGCTAGGATACACTATGAAGTCCAACGCT GCAAGTTCAACCTGCCAACCTAGCCCTGGAGGGAACCAAGTGGAGTATGGCATCTTTGTGTTGAACATCA CTTGCCCTCGCAGTGAGTATGACATCACGTTAGACCCATCCAAAACCTTGATAGAGTTTAGGGACTGGGA AGGAGCCGTAACCTGTGTGCATGAGCTGGTTACATCTTTTCTCCACAGAGAACATCTTACAATGAAACTA ACTGTAACACAGAAAGGAAGCGAAGCAGGACTTCAGGAGAGGGATTCATTATCAAGTGATAATATGGAAT CAAAGGAGACAGATGTGTGTGTCAATGCCATCAGTACAACTGATTGTACAAATGCAGTACAATCAACATG TGTAAGAAGACAAACCATCCCTGTGCCACATGTTAGCCCCATGGTGGATGACCAGAACCCTTGTGATGTA GAGACAATAGCTGACAGTAATGGGGAAGGTGATGGGGCATGCACAGATGTGTCTTTAAATAATCCTGACA AGACACCAGATGCATTCGGAGATGCTACCGAAAGGATGGATGAACCTGATATCATACAATCAGATGCAAG CGAAACAATAATACCTCAGTGTGAGCTTAACACTCATGCTGACTCAGAAAAGATTATTCCAACAAGCGCA AGTAACCATACGGATCCTGTTGTAGATGCACATTGTCAGCCCTGTGGGGGTATTTTGGCAACTAAACCTG TGCCAACAACACCTGATATTGAGAAGAAGGCAAGTGATAGTCCTCTGAAAATGCAGTCAGTGACTGCAGA AGCTCTCTTGACATCATCATCTTCAGAACTTGATGTATGTTCTAGTGAGGAGACACTAACCAGCAGTGAA GTGGAAATAAGAACACCTGAGTCAGATGTACACCAGTGCTGTGATGCTCGCTGTAGGTCGTTACGAAGAG ATGACACTGACTCTGGACTAAAAGTTGCTGATCTTCTTTCCCCTAGAACCAAGCTTGCTGTAAAGGCAAG GAACTCTCTATCAATGTTCAGGAGATCAGTAAAGAAGAAGAGATTAACAAAGGCAGGGAAGGATGAGTCA TCTAAGAAATCTGAACAGAAAGTCAATAAGCATCTGCAATTTGTTACAGCCAGTGAACACAAAACAATTG CATTGAGATGGCATAGGAGTCCAGGATTCCGAAGCAGATTGGAAAATCTGAACATCAAATGTCAGGACAG GCAGGAACAGAGGATGAACCCAATGATGGATGTACTTCAAAGACTGTCATCATCTAGTGGACCCAACCAA CCAAACAATGATATGGGTGCTTCTAGTTCACCAAGTAGCAGCTCTAGGAAGGAAGTATGTCAAAACCATC AGCATACAAGTACTGATGAGAATAGCAAACCAGATCATCATAAAAAATGTCTTCATGTGGCAGAAATACT TGAAAACAATGCCGATCAGCATTTTAGTGACAAACACAATGTTTCCACTGTCAGTGTAGATGAAAAGGAA GGTAATCCAGCTGAACACAAAGAACACCTTGTTCAAGACTCAGAAGGGCAAATTACAATTGATGCAGGCA GAGATAAATGTACAGAAGTCACTACAGGAGAATACTGTGTAAGAGGAAGGATTAGTGGTAATGCCCCATG CATCCCAACAAGTTCTATGTTAGAATCGACACACACTAAGAAGAGGGTAGCAGATTATCCCAATTGTCTA ATCATTGCTGAGGAACAGAAGAAAGTGGTACCTTGCGCAAACAGTACATCACAAAGCAGTACATTGAACT CTTCAGCTTCAGCTGAAATGCCAAGAAAATTCTTGACCTCCACTTCGTTCATGGTAAGTGCATGTGAGGT CTTTGACAGAGAACCATCACAAACCTCCAGTCAAACTGATGGTTGCACAAAAATCAACAATGCTGAACTT AAACAGGCAGTCAACCAGAGTGCTAGAGAAGCAGATGATGCACATGTAATGACACAGCCAAATCAGCAGA GACCTGTTGCTGTACCTCCCTGCAATGCAACAGAACCATTTAGTGTTCATGATGAATATGAATTTGCTGA GGGTGCAGAAGGTCTGTATAGGAATAACATTGATGATCAAACATTAGATGATGGCACATCATGCCCATCG ATGGAAGGAGACATAACATTAATTGTAGCACCAGGGATCCAACTAATGAATGAAGAGGATACAGTTGTAG ATGATGATCAAGGTGCTATAAAAAGCTTGCTGCTAGACGTTAATGAAAATGAGTTAAAGGGAAGCATTGT AGACCTGACTACTGAGCCTGATACTGTAAGTGAAAATATGGATCTTCTGGATACCATCGATGCAGATGAA TCAATTTCGTTACTTTACATACCTCACCAAGATGAAGGTCTGTGTAACAATACAAAATCATATCAAGAAT CAATCAGTTTATCAGAACAACCAGGTAAAGAAAGAGTTATTAGCACTGATATTCAATGCACGGAAATGTC AACTGCGCTAGTAGCATCTTCACTATCACCATCCGTTACACACCAGAATAATGATGATCTGGATGTCACT GGTGACCTAGATGTTACATCCACTCACGTCAGACACTGTGTTGGAGATGATGAAGTAGAGATATCTAGCC ATGATAACCTATCTTCACAATCATCTAAGGTATGCGAATCCTTCCATCCAACTGAAAATGAAGTCATGGA TGCCACTATACCATCTGCAGGAAACACTGATGGAGAGTTTGTGATAGAGAACAGAGAATGGTACAGTGTG TATGATGTTTCAAGGGGTATGAAAGTCTTTATCAATCGCTTTAATGGAAACTGCTCTATGGAAAAACCTG AAGAAGGTCCAGGAATGAACCAGGAAGCAAGGCAGATCAGTGAAGACACTCAATTCAGCATGGTAACAAA AAGTGATACATTGGCCCATCCGCATCTGCCACACAGTGCGGCACCATTTGTGACCAGCCTGAGAGATAAA AAGGAATCATCCCATTCCCGTGATCCTCCAGTCACACATGCTACCATGGCAACCATTGATGCTGCGATGG AAGAGAGCCAAGAAGAAGATGATGAGCTATCCATGGTCAAGTGGGGCAATTCAAGTCAGATTTCAGGAAA GGGCTGTGCAACCGATGAAGCTCCTCATTTCTTAAAATCCGATCAAGCGGAGACGGGATGTAGATTTTTA ACATCTAATGTGAGTGAGGGTTTATCCAGTGTTGATGCAAAGTTTCAGGCCATGGTTTTATCCTCACTCA ATCCATGTCAGTTCACCAAGGCCATGTTCAACAGTATCAAGGTCCTTGGCCAGGTGGATACTAAGTTCAT AGCGTGTCTGGTGAACAGTGATTATGACAAGAACCCAGCAGGAGAATCTAACCTTCTCATTCTGGTTGAT CAACATGCTGCACATGAGCGCATCAGACTTGAAATGCTTATTCAAGATGCATATACACCACGCGTTGATA CTGATGATATTGACAACGACAAAACGAGATGTATCCGTACTTCTGAAGTCACTCCAGCCCTCCGTATCGG CCTGTCACCATCTGAGCTCAGATTATTGGAGGCCTACAGTCCCAAGATGAAGAGGATTGGTATAGAATAC ACATTGTCTGGAGACAGTGCCATGGTAACACATCTACCAGCATGTTTCGTGGAGAAAGAAGCAAATGAGC TCAAGAGAGGGCGCCAGACCATCGCTACCAGTATGGCTGAGACGTTAATCAAGGAAGTATTAGACTCAAT ACAGCATCAATCTGGAGCTGTGTCATCTCTACCGAAGACAATCACAAGGATTCTCAATTCTCAAGCTTGT CATGGTGCTATTAAGTTTGGAGACACTCTGGACCGTGATGAATGCAAGACTCTGATAGGTCAGCTGTCAT CATGTGACTTGCCTTTTCAATGTGCTCATGGCCGTCCAGCACTTATGCCTATTTTTGACTTTAAGAAAAT AAAGCATGGAGTCAGTGAGAAGGTTACACCACAAGTTTGGAAGCTGAAGTATCTCTCATCAGGTACAACT ACACAAGCATGATTTGATATCATCTCAGATTAAAGAATGTATACCTGATACCAAAGGAAATGATATATGA ATGTTCAATGAAGCATGAAGGGTTTTAACAATGTAGGTGTTGACTATCTGGAACACCAAAAGAAGCTTAA GAAAATGGTAAATATCAGGATTGTTTTCCATAAAACATGGCTTTACACTAAATCAAATAATGGGTTGCCC AATTAAACAACCAACATGTGCCTAAATTAGAGGCAAGGGGGTGGGGAAAGGGTAGGGTTGTTAGAAAAAA AAAGTTTTTTTTTTTTTTTTTACTCATTTAAATTGTTTGATAAATCTCACTTTTAAATGCTGTAGATTCA TTGACTTACTACATAATCACTTGTAGCCCCCCCCCCCCCATTATTTCTTGGAGTGATGTTAAAGTATCAA ATGCATACATGTTCTTTTATAAAAGGTTGTCTTACTTTTTTTTCAAAGGAGAATCAAGCAGCTCCTTTTC ACCCAGAGTTATTAGGAACTTAAAATCACATGTCTGATATTGTTATTATTTTTATTATTATTATTTTTTT TTTGGGGGGGGGGAGGGGTTGAGATAACACTAAAGTATTGTTATCAAATTGCATTGTATCCCCATGAGTG GTATTATACCAGAAAGTGTGCAGTAGAAATATGTGTGATTATTATATTATTATTATCATTATTATTATTA TCATTATTATTATTATTATTGTTATCATTATTATTATTATCATTATTATTATAAGGTTAATATTAAGACA TGCTCCTTGGGAAAGCATTTTGGAAATTATATTGTAGCAGGAAATATATGAACAGAGTTTAGCTTAATGG ACACCTCACCCCATGAAATTACTTTAGTTATTCTGAGATATTTATTGTATTATCATAATGTACAGTTTCT CAGCACGACATGTTCATCACAATTTTCTTGAAAAGTGTTCAAATTTCTCGATGCTTCCTTCCCACGTGTG TATGGTAATGATGTGTTTCATTCACATGCTATTATCTTATGCAATATGTACTATAATTATCAGAACGCAA ACTTGTTTGCAAAAGTTGTCGCTCTTCTGGGGAGAAGGTTTCACATTAATGAAATAGATTTGTCAACAGC TATATTTCTCATACCGGTATCTTGAATAAATGACTTGTAATTGTTTCCCTGTTATATATTTCACACCAAG TCTAATTTCTACGTTCTCACCTATGAGAATCCTCATTGAAAAGTAAGGGTTTTATTTTATTAATTAAAAA GCCTTTTCAACTAAAGCTTGGTGCATGAAACATGTACAAGTTTGCCTGGTATGTCACATTATCAAGAAAA TGGCTGTGTCCATGTCATGCTAAACGTCATTACATCATGCCAAGAATATCTTCATTTATATATCTCTTGT ACATTTTCGTAAGGAATATTGTACATAAATAGGAAGGAATAAATCTCATCTTTCAGCATACCTACACCTG TTTTCCAGGGTGAGGTTTCCTTTAAATGTATTATCTCATGTTACCTGTGCATTTCTGAGTTTAAAGAGAC ATACAATTTACACGAAGGAAAAACTTCTAGTTCTACTTACATGTAAATCATTTCATGGGCAATAGTAAAA TGATTTGTACTACCGTTATATTGTATCAGGTGTGCCTCGTGGTAGTGCTATCTACTTGTATATACATGTA TATGTCTTCCATTTAAAGAAAATGAAAATGTAAAAATGTTCAGTGTCTAGAACTCTAATTTTTGAAAGAA CTAGAAGAAAAAAAGAAAGAAACTGAATGTTCTTGTCATACATATTCGGATGTTTGTGAAATGGATTTAG CTAAGACAGTAACATCATCATTTGGTCTAAACTGCTGAATTTCTAAGGTATGGATGTAATGTATAACATG TGTTTCAAATAGTAGTGACATCTAGGTGCAGTACTTTGTAGTTGGCTTTGCTGTGTGAAGAACATAATAG TGCAAGGTAATGATATATAAGTACTGATATAATATCCAAGATACTCATTTGTGACAGCTTCATGTCTTGA GTATTAAAATATGCTATGCTTTTGTTTGCTATTGTTAATGTGACAGTATAAAACAGTTAAAACATTTATT GATTTGCAATAGAAGTGTTGTCGGGTAAAACTCAATTTAGTGTGTATGTATGCATATCTTGCCAGATCCT ACTAGACAGCTGAAATAATGATTATTTTTGTTTATTTATTGTTCAAAATGGAAAGAAAATTATAGATATG CTATTTTATTTTGCTCAGAATTTATGCATGAATTATTAAAGCCTCAGGGTTGTGGAATGAAATAAAGTAA AGATATTTATGGTTTC
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
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???blast.gapedalgin???
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???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds