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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XR_004066311.1 PREDICTED: Strongylocentrotus purpuratus nucleoporin NUP188 homolog (LOC581874), transcript variant X2, misc_RNA GCGAAAATTATTTTGATGGATTCAATGGCTGAAATCTGAGTGAATAAAATCATGGCTGTAGTCACGACAT CCTGTCAGGAATTGCTTCTGATAATTAGTGGACATTCTGCCATCAGAGATAAGGAATTGATTAAAGCTGA GCTTGTAAATGACAAGAAGAAGTTTCTTGAAGGGGTGCTGGTGTTTAAGAAACACAATGAGGAATCAGAG AAAAAGCTCAAGGAAGAGAAGGCAATCAGTGAACTTGAACGCAAGTTTCTTCTACAGGCGTGCAGGTTCT TGGATCTGGATGCATTGCAGTGCAGGGAACTGTTTGATTTGTATCTACTCTGTGCATTCCGAGGAACAGG AAAGCAACTCCAGGCCATACTGAAAAATGAAAGAAGTGTTCAAGCCATGCTGCTTAAACTTTGGGAGTTC TACCATGCAGACAGACTCCATCTCCTTCAATGCATCAAGCACTTGGCCAATTTCTGGCAAGACACAGAAC ACCCATACCAGGCCCAGTATGCAGACTTTGTGGAGGAACTACAAAGCAAGGGTCTGTTTGATAAACTCCT AGCCCAGTATAAAGACCGGTTCAGTTCTCCTGCCCCTACGAAGGATAAGGCTGGTCAGTTGATGACGGAC AGACACAGGATACGATGGTGTATACAGAGTCTTCATGAACAGAGTGAACTTCTAGGAATCATCTTGCTGT TCTTACATGCCTCTCTGACTCCAATGGATAAGCTCTTAACAATCATCAACCTTTTCCAGCAACAAGGTTT TGGTACAAGACAACCCTACAGACATCTACTAGATGCTGAAGAAATGGCTCAAAAACTCACCAACAAGATT GAGTTCTTATGCTGTGTCATAGTACTGGAATGCATGGACCTGTTTCCACTGATGGGTCTTACAGATAAAA GCAGTATTGAGAATCATCCTCTTATTGCCAATGAAAAGTTGTCCAAGGAGTTTTCCAGTGCCGTCCAGTC TCTTGGTCAATCACCCAGTCACACCCCTATCCAGCTGGCCTGGATGGTCATCCACACCGCCGCCTGGCCA GGCAAGGACACCGCCCTTGTGAGACGGTTAGGAAACCAGGCTCTGCGGCTCCATGTCTTCAAGTACCTGA CCTTTGGCCTGTCCAAGGCTCTGCCGAATGACAGCTCGGTTGAATCGATGGCTTGCCATTCTGTCATCTA CTCTCTGATGACTGTTGTACTCACTGTGTTTCAAGAAGATTCACTAGGAGGGGTCCAGGATTTGGTCCAG TTGTCCTGTCAGCTGCTATCACAGCCTCATCTATGTAGAGAGTTTTGGACTACTGACCTAGACGGAGGCT TTGCAGCCCTGCTTCAATCATCGATGGCTTCCTTCCCTCTAGAGTTCTCTTTGCCAATGAAATTCCTCAA GGCGCTGTCTACAGAGGGCAGCAAACAGATCTACCAGTTATTAGCTCACCTGCCAGCTTTCACGGAACCC CTCGATAATAACCGTAGCTCTGATATCGAGACGTCTGCAGGAGATGACGTTTGGAAGCTGGTCAATGATA AGGTTGTGTGCAAAGCAGGCAAGAATTCTCCTGGATTTGTGATCCCAGCAGGAACTCTTGGACAGCTAGA GCAGAGACCAGATGGTCCCCCTCTCATCACATGGGATGTGGACTACAGTGGTCTTCAGCTATTCCAGTGT GTCTTAGACTGGCTGATCAGTGCCGCGCCCACGACATCACCATCAGACACCTTGGTACAGCAGGCTAAGG ATGTCATTGACCTGGTTGAACAGATGCTGCAGTCTGATTGGTCAGTCTCAGAGTACCTCCAGCCAATCAC AGACTGTATACTGCCCCTCATCTCAAGCTTGGTCCAAATCCAGAGACCACCTCTGCATCTGATAGGTTCA TGTGTCAAGTGTCTCAACACCATGGCCAAGTATGACCCTGAGCAGCTTTGGCAAGCACTCCAGAGTACTG GTTTCTTACCCTACACCGGTACACTTTACACACAAGTGGGACAAGCTGCAAGCGGTGATGGGGTGTTTCC TGGGAGCTATGGCAAGGTTGCTTTGGAATGGGAGAAACAGTTTGGTACCTACCCTGTCACACTGGAGTTC ATCAAACTTGTTCACACCCTCATAGAGGGTCTAGCATCGAAGAATGTCAGCATGGCAACCTCACAAGATC TTCTTGCCTGCATCATCTTCTTGCAACGAGACATCTTCACAACATTCCAGAGGTGGCGCTACACAGACTT CAAGGACAAAGAGAAAATAGGTCTGAGTGTAATGGAAGTGTTCCATGTGGTTCTTCATGTTGTTCCCACA TCACCTGTGTCCAAGAAACCTGTGCTTGGAGATGAGCAGCCAGAGGGAGTGTCTGTTCGAGATGCATGCA TCTATGGCCTCCTACATACAGCGGCTGGTCAATCTCTGCTCACCATTGCTGCTACAGGGGTGGACACCAT CGAGCAGAAACAGCTAGAATGTGGAAGTTTCTTGGATGTTACCCCTGAGAGCCAGCTGGTGAAGCTCTCC CTCTCCATCCTCAACCGTCTCCTCCTCCTCAAGCCCCAGCAGGAGACCGGCTCCAGGTCCGGCTCTCCGA CCCACTCTGCCCCTGAGCAGTGCCCCCTGGAGGTTGCTCTGACCTCCCACTCCACCGGCTTGCCCCACCA GCCTCATTTAGTCGCTGTGATAGCGGGGTATATCTATCATCGGCAGGATCCGCGGCTTCCGACGCTCGCT GTGCTCCTCCTCAGGAGATTGGCGCAGGTTGCTCCCATGTCATTGTTTGGTTGCCTTGGAAACCAAGCTC CAGCATTCCGAGATGCTTTTCTCTTCAGGCTTCAGACTCATTCAGAGGATATTCGGCTCAGGGTTGGTAT TCTAGAGCTCCTGGCAGTGTCAGCAGAGACCCAACCAGGGTTCAGTGAACTATTCCTCAATCTCCAACCC AAGAAAGATGACCCTAAGGGAAAGAAGAAGAAGGAGAAAGGAGCTGAGAAGAAGAGTCCAAAGAATGAAC AGCAGGAGCTTGAAATTGGGAAGATCAGTTGCATCCATGCTGTGCTTGACATCTTAGAAGAGTCCAAACA GGGCACCACCCACTCCCCCCCTGATCTTCACTGTGCTGCCCTAGGGTTCCTCCAAGCTCTCTGGCAGGAC AGAAGAGAGACGGCTCTCAGTATCCTCAGGAAAAGGTCTAAGTTTTGGAGTGATGTAGCAGCGCCTCTCT TTAAGAACCCTCCTGCACCAGAGCCAGAGTCACAGGTAACCAGCTCTCTGATCAAGATCAGGGCTCATGC TTTCAGGATACTGGCACTAGAGTGCTTCCATGCTGGACAATCGGGTATACCGAAAGACTTGGACGATGTC CTGAAGAAGTTGGATGAAGAGAACAGATTCCAGTTCTGGTCCAAGTACGTTGGTGAGGTGCTAGAGGCTT ACGCTCCTACAAACGTAGATGTTGAAGAGTACACGTTGAGAGAACACGAGGGACTGGTCCTGCTTCAGGC TTGGAGGACGGTCTTAGTGGTAGCTGCATCACAGAAGTTCAAAGCCTTGTCCATCAATGAAACTGCCACA CAATCCACCATCCTCAATGACTTGGTTGCTGCTATCCACAAACAAGCCCAGAACCTGGACTCTATCTTCA ACGCCAAGGCTCTCGCTCTGCTCTCATCTGTCTACCTCACGCTGGTCACCAGATGGAAGTGCAATCTAAG TGGTCAATGGTCCAAGGTCAAGCTCCTGGTAGGCACACTGGAGGCCATTCTTGCCTCGGAGGACACGCCC CTATTGAGGCGTTGCCAGGCAGCCATGATGGGAGCCCTTACCAATGTCTTAAGACACAGGCGTCTGAAAC AAACTAAGGATAAGGAGGGTATTGAGCTATCGCTGATGGAGAGACTCCTACCTCCAATCTGTGTAGCATT ACAGCACAGCAAGACCTATCACAAGCCCCCCAAGTCAGTCCCTCAACCTCCTACCCAGGAAGTTGCCTTA GACATCACCATGGAAGACCTTGACAGGACTGGTGCAGCTGAGGAGCTAGTGCTTCGAAGTCAAGGGGACA AGGTTACCAAGGCTGCAAGTACTGCTCCGATACAGCTTCCAGTGATAGCTGCATATCTGTTGGATGAGGT TCTGTTGAGTCAAGCTGACCATGCAGACCAGTGGATGCCTCTGATCAGGGAACAGAGCGTTGTATCGCTA CTCCTTAGCACTCTCCAAGCATGCTTACAGGCAAAGAAGGGCTTGCATTATGTTGAGGCTGTGATGGTAC TTCTCAAAGATCTAGCAGCCATTCCACCGACTGCTGAAGCAGTACGTATCACTGGGTACATCCAGCACAC ATGTCTATCTCTAGTATGGCTCCATGAAAACGTCAGTGAACAGGACTATACATGGAGCAAGAAGACAAAG GGTGAGAAACCAGACGGCACGTCTTGGCTGACCATCTATGTAGAGTCCATCTCAGTGACCGCTACCCTTC TGGCCACACTCAGTCATGCCTTCTTGACCGACGCACTGGACTTCTTTGGAGTTCATCGTGAGAGGATGAT GAAGTGTCTGGAGTCGGTGTACCTTCTTCAGAGCCCCCTCCAGCTGGAGGAGGCGCAGGCTACCACCTCC CTGGTATACCAGCTGGCTCATCACACCCGTCAGTGGAGGTTCAACATGCCTGCTGAACTAGCCCTGCTGC AGGAGACCCTAGCAAGGCTCACACAGAGCTGTGTGGCGCTTCTCATAAGGCCCAGGCTACTGCAGCACAT GCTAGAGATGAAGACGAATGCCAAGGACGCCAGTCAGAGCCAACCCTTATCCCAAGTAATGCAAAAGGTA CCTAGGAGGTTACTACAACACCAGGTCTCAACCGACCAATCAGATGCCAGTATTAGTGACGATGCTCAAG AAGTGCAGTCCAGACTTCTAGTTATCATGAGCAGAACGTTAGCTTCATTCCGCCTCTTCAGTCCAGATCT TCTAGAATCACTTCTCAACCAGAGTCTTGACGTGTCCGAATATCCAATGCTCTACTGCCTTGGCTTCAGC ACTCCCTCTCTTGACCAAAAAACACCAGCTTCATTTGGAACGCTCATCTCATGCATTAACTGGTGCCTTC AAATGCTACCAAAGCTGGATGTTAATAAATCACCCATGAAGGTGTTAGATCAGAAACCTGCTGCTTCCCC CTCAGATGCAAAGACCATGCAAAGGCCAGTGCTGTTATTTGTTCTTGAGAATGCTGTTCATCTGATCATG GCTCAGGGGATGAGGACGTTCAGGGATCCAGCTGTACCGACCAGAGATAGGCAACTACTCAAAAGAGAAC TCGGTTCAGAATTGAATACATTCCTGATCAGTCTACAGAGGTATTTCCGGCGGGGCAAGCCTGGCTCTCC GTCCGATGCAAGCCCCGGAACCTCCTCTGCCCGTCTTGCCACTGGCTCCGCAACTTCTGTGATGACCAAG GCCTCCCTCAATGCTGCATTCACAGAAGCCAAGGAGCAACTCTTCTTTAAGGTCGTCCAGATCTTTGTCA TACAGCTGAGTAAATGATGTCAAGATCATATGTGAATGGGCTCCCCTGATTGTGGATCAAATACGTTGAA CCATATCTGACCAGGCTAAAGGGTCGCATTTTGTTTTCTTAACAAAACTTGGACACTAAACACTCCAGTA AGCCGGAAAACAAACATTGACACCCTGTCGTCAAAATCTGTCTCTTCCACATTAATCGACTACCGGTATT GATTTTTTTTTCTCTAGAATTTAAGAGAATTTAAGTGAATATTTCATGTGAATTAGAGATCTATTTTCTT ACATTATTCATAACATGTCTTGGAAAATATGGATCAAAGCTATGCAATGCTATTCACATATTTTGTGAAA CCAGAATTAGTTTCTGTTCTACTATATATTCTGTGTTTACCTTTCATTGTAAATGACTGAAAATCCTTTC CACTTTATGGTATTACAAATTACTGCTACTGATGTGGAACGAGTGGATATTCAAGGATGCATTTTCAAAT ATCGATACATTTGTTTTTGCTTGTATAATAGTTCTGAATGGTAAGATACAGAGGCTGTGTTTCTTCATGC AGATTTTGAAATCTATGAGGAGGATCATTTGACTGTAAGTGTGGCTTACATGTATTTCAAACAATTTAAT GAAAAAGACTATTTCTCTTAAAAGGTATTTATTCAATTTTAAAAGTACACCCATAAATTCAGTGTCCAAC AACACTACATGTACTTTTTTGCTTCTAAGTAGATATTCTAATTTGTATGAATTTTTCTTGTAATTTTTTC TATTTGAAGCGTATAGGGACATGCTATCCTGTAATGTGTTGTGCACTATAAAAGAACCGAGTATTACTAT TATTATTATTTTTTTAATTTTAAGAATGGTGTAGGAATACGTCTCCTTTCTGCTGGATAAGACAAGAATT TTCTGATAAAATTATAAATGCCTTTAAATTAAGCAGCCTGGCATAAAGTGTGGAAAAAGAAGCTTCACCA CACAACGTTGTCAAACATTGGGCATGTAACCCCTACCCCCATCTACTGACTAATGCAGGAAGGTGGAGGG GGAGGGGAGGGCATAGAGAACCCCCGCCCCCTTTTCAGATATTCTGTCCCCCAAAACAGTTGACCTGTTG CGTACCAATGGGTACCAGGCAAATACAAATACATATTAGAACCACATTCAGTTAAATCCGACAAGTTTAA AGAAGCATTTTAGATGATGCACTTGAGTGTCCCGTAAAGAGAATGACTACAGCATATTAAAAACCGCTTC ACAGTGTAATGGTTGGAAATGAACAGTGTTAAATCCTTTTTTTTTTCTTTTTTGTTATTATGATATTTTG TGCACTGTCTCATGTATCTCAATATTATTATTTTTCATTTGTTAATTGATTTTGTGATGGAATAGATTTT TTGAAAGCATTATTTCACCTTGTATATGAAGATGGCCTAACTTTTAGTCACTGTTACATTGACAAAAATT GAAGCCACGACATGTTGAATTCAATGTGAACTGAACATTTGTATAGCATTCTCTTTTGGTCAGTGACAGG TATATGGAGTTTAACTCTATGATCCTTTCAATCCCATTAAGTTATTGTGTTTGCCTATTTACAAAGATGT TTTTGTTTATATATGTCAGATAATCCTTGAGCTAATGTTTATTTTTGATCATTGAAAGTGACCTTGAGAT GGAGGTGTATGAAACAATATTCATATACCAGGGGAGTGCTTCACACAGATCCTAAGTTAAACTTATCTAA AAGTTGAGACTCAACAATTATGGAAAGCCGTTGGCATCTATGAAAATATTTTGTAAAAGTTATTTAAA
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???blast.eval.minus100???
???blast.numalign???
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???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds