Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.echinobaseSearchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030991495.1 PREDICTED: Strongylocentrotus purpuratus palmitoyltransferase ZDHHC5 (LOC586843), transcript variant X1, mRNA CTATGTGTGGTGATAAAACTACCATCAACAAGATGGGCGATCTATTCGATCTTGGCGATTGAGAAAATCT GAGGTCAATTTCCACCGCTAAATGTCTTGTGTATATCTATCAACATGGGTTGCTGTAAAGGAAAATGTAA ACTTTCGACAAGATATATCCCTGTGACGATTGCTTACATCCTTGTCATTGGTACCTCTGGTCTATTTTTC GCGTTTCCGTTAAGAGATCTGATTGTTAAATGTGAGTACCACCCGTCAATAGCTGCCTTTGATGGACTCC TATTCCTGGTTGCCCTCATCAACTTCCTACTAGCAACGTTTGTTGATCCTGGAGTATTCCCAAGAACTGC AGTTGGAGACGAAGACAGAGACGATGACTTGAGGGCACCCTTGTACAAAACAGTTCAAATCAGAGGTATC CAAGTCCGTATGAAATGGTGTTCAACGTGTCGCTTTTACAGACCACCAAGATGTTCACATTGTAGTGTCT GCAACAATTGTATTGAGAGGTTTGACCATCACTGTCCGTGGGTGAATAACTGTGTCGGGAGGAGAAACTA CCGCTACTTCTTTCTCTTTCTGCTCTCGTTAACGATGCACATGGTGTCCGTCTTCGTACTCAGTCTAATC TACGTGCTGCAGGCCAAAGCTTCAATCTCAGACTACCAAAAAATTATTTCTATTGTAGTGATGAGCGTAG ATGCCTTGTGCTTCATACCAGTAATAGTGCTTACCGTGTTCCATATGTCCCTCATCTGTAAGGGCCGCAC CACCAACGAGCAGGTAACAGGTAAATTCCAGAGTGGTCATAATCCTTTTGACAAGGGATGCTTTAAGAAT TGCATGGAAGTCTTCTGTGGTCCACAGCCAGCAAGGTATGTGGGTTTCAAAAGCAAACCAGTCTCGCTTG CTGCCATGTACATGCCGGTGCACACCACCTCCACGACAGGCAACGGCGTCACCGACAACCAGATCCACGT CCGGGTGGAGAGTGGGAGAACGACGGTCACGCCGCAACACACGATGACGCCGCAGCAGCACACGATGGCA CCAGCCGTCAATAACAAACAACATCAGGTACACTCTTCTGTAGGCAACAACCACACAGCACCTTATTTCT CAGACATCAGGAGAGAGGGTTTAGGGGATGAGAGTCAGGGAGACGACTGCGAGGCCGAGCCACCACCACC ACCACCATCATCGGTCAACCCCTACAACCAGGTCCACCTGTACCAACACCAGGACGTAGCTAGCTCATCC CCTCAGACCGACAACAGGATACGCTACTCAAGAAGGGACCCTCCTAGCTTCAGCAATGAGAGCAAGTCAG CCACACCCTCGCACGGGAGCAGCGAACTGATAAACAGTCCTGCATCGCGGCGTAACAACCACCGCGAATG GGACATGAGCAGCACGCCTTCATCAGGCAGTGTGCACAGTCCGCACAGGCAAAGCCCACGCAGCAGCTCA AAGGGCAACAATGCGCACCACGCCATGAAAACAAATAATGTGAACCACCAAGAGAACAACATCCATGCAC AACACAACAATCATAAAGCAAACAATGCCCCCAACCATGTTAAACCCGAAATGCAGCATGTAGCCATGCG GAATCGGGAGGGGTCACGGCTCAGGCGTCCCATCTCGTTCGTCACGGCGCTTAAGATGAGCGAGGAGTCA GAGTCGATGATGCGCAGCCAGGAGAAACCAACGAACAGTGCCCCTGTGAGAAGTAAATCAACCAAGGCAG ACGTTGGACGCAACAACCACACAGCACCCACTGTCAAACGCTCCAATACAAGTTTCAACTCTAGCCATAA TGCCAGTCACATAGTGCAAGTCAACGGAGAAGATAGGACTCAAATGATGACTTACGAAGTGTCCGTTTGA GACACACCATTTATTACTGAAATCTTCTCTCGCTTTTTCTCTGTTTTGTAGATAAATCATTCTAACAATG GTTAGGAAATTCAAGTAAATCAACTTCTTTCACATACTGAGAAACACTTCACTTCCAGGGAGTTATGCCT CCATTACACATTCTGATCCAGCTAGCATTAGAAATAATATCAACTTCTTAATTCTTCATTGCTGTTTTCA ATCAGTCATGCAAGATTTACTAATCTCTCTCTCAACAACTCTTATTTTTATAGTAGAGACAGACAACAAA TTGAAAAGAAAAATGTGATATTTAACATATTTAGAGGAAGGCATAAAGCTAACAGAATTACTAGAGCGAT ATAATTGTATATACCAGGAGCTGTTTTATTTTTCTTGTGGAATTGTTCATTGCCGCTTACCTACCTGCTG AAAACCTCCACCTCGTCAAAACTTATGCGGTCAAATAATCCCTTAGCTAGATATCAAGAAATCTTACAAA ATGTGCAAGCCATGTATAAGAACAGGATCCTATCAAGAATAAGAGGTTATGATCTTGCTCCATTCAGTTC TTTACAGGTGCATCAGGAGATGTGGTCATAGTGAATTACACTCATATATGCGTCATACATACTACAGTGA GAGCTGGGAAATCCGGTGGCCAGCGATCGGTCATTTTGTGTCAGAAATAAGACGGGAGGAGGGCAAAATT TCCCACCCTGTAATTTTTGTGCAGTGCTATTTTTTTTAAATGATATAAATCCGAATTCCTATGTCTATCA ATCTATTGCATGAAATAGATATGAAGATGGATGGAGCCGTCAAGTTATGAGGTTTGGTTTGTGGTATTTT GGTTTCTGAATCACAGTTTTCGGTATCCTTTTTTTCCAATTTTCGAAGGATAGTTTGGAAACATCCTGAA AAATAACATATTTTGAATTGTTGGAATTCGAAAAATGAAACATTGGCTATTGTATCGTTTTGATTCAAAT GATGTGTCTTTGAATTAAAGAAAAGCTAAGTGCATTGAGAAGCCAATCACTAATTCAGCCTCAATATACA AGAGGGGCAGGAATGATTGAGATTTTAAAAGTTCTATAAAAAGCACGATAAAGGAGATTGTAAAAAGACC AAAATCATTATCTGGGATCTTTCAAATAATTAAGTATTTTCAGAAACAATTTTCTTTTATTTAAGAATTT TAACAAGAAGAGCAATGATTTCTATCAAAAATATGATGAACTTTTAATATCCAAGGGTTGAAATAATAGT TCTTAAATATAAAAAGTGTGTTAAAAGTTGCAGCCAAACAGCAAGCCAAAAACGGCCCCTTGAAATTTCC ATATCAATTTTCAAAAGAGCTACTATGAAAAAGTAATAAAGTTTCGCACTGTATTGGAATGACATAAAAA ATCACCACTGCCCTGCTGATACAATGTGGAAAAACTCACAAAATTGCTGTGTGTGACATAGACTTCTCAA TCAAAGTAAACAGAGGGGCGATTCCAGGCAATGTGTCTGGTATGACATTTCTTTTTTTACACATAGTTCA TCCATAAATGAACGAGTATTGTGGTGTGGCCAATGAAACATCATGCTTTCTGCTACCATTACATAGACAT AGTTGTATCTAGAGATTCTTTTTTTCATGGATGAAATACGTGGATATATGGCATATGTCCCACAAGATGC ATTGTATGGAATCGCCCAGAGATATGATAACTAAAGGATTCGTTGTTGTTTATGTAGACCTTATTTTTGC TAAAAGACATTCTAAAGCTTATACATGGAATTAAAACAGAGTAAGTCAAGTGTTATGCTACATGTCTGCA CCCTTTATGTCTGTTCTGTAACTTCACCAAAATCAGTGTTTGGGTGTATTTTCCTGTGGAGAAGTTGTAT TTTGTTGGAGGAAAATGTCCAAGAATTTGTCAATTTGTGTACAGGTAGTGCTGAGTTGGATGTACAAAAG GAAATGCTTTCAGGAGATCGGGGTGTTGGTGACGGTCAGAAAATCACTGTGTTTCATCATCTCATTACCT ACATTGCATCTTCACACCGATATGATCTTACTACTGTTTCTTTTGTGCCCTCATTGAGCTGTTCGTCTTT GGAAATCTGAAGTTTGTAGTCTTGAAGAGAATACAAACTTTACTGATGTTGTTCCAATAGTCTTTGTAAA GAAATGAGAAGAAATAAAGTGGTATATATCAGTTGTCTGGATAAATACAAAGAATCTTGTAATTGGATAG TTTAAACTTAATGCAAATGAGTATACTGTGAAAATGAGCCTCCCTTATGTTGTCATGAATCTGCAGACAT TTTTTTAATTGCCTTTCCATTTCAGGTACATACTCTTCATGTATATTCTTAAATATATAGATTGAGAGAG CAGAATTTTTCCTCTCGAGCAATGTCGTTATTATTGCAGTTACATCTCAACTGTGAACTGCTCACAGAGC TAGGAATTCAAAACATTATCGTAAATTAACAGTCCTTTCGAAGTCTTTCATTAGGTTCACCTGGGGCCCG TTTCACAAAGCCTTTTTTAATGACAAATGACAAAAATCAGTGAAAAATCTGTTGATAACCTATCAGAAGC AAGGATTTCAGTAGCTTATAACAAAAACTGTCATATGTCACTGATGACAAGTTTTGTGCAACGCCCCCCA GGTTGTCCAGTATTGATTGAAGAGGTTGAGATGTCATTTTTAGTTGTAATTCTCCATAATTTATAAAGAA TGGTAATATTTATTGAACTAGACTCATATTAACACAGGGTGTAAATTATTCTAATGAACCAATCAAGATC TTATCTCTTGACAAGAAACACAAGAGTTCCTACTTTTACGTCGTATTTATGTTCTGGTTGAGATGTCATT TTTAGTTGTAATTCTCCATAATTTATAAAGAATGGTAATATTTATTGAACTAGACTCATATTAACACAGG GTGTAAATTATTCTAATGAACCAATCAAGATCTTATCTCTTGACAAGAAACACAAGAGTTCCTACTTTTA CGTCGTATTTATGTTCTGGTACATTTGTATATTTTCTGCCTTTCTTTTGTATTTATTGTAAAGTATGATA TTTTCTGAAGAAATGAAAAATGAGTGATTTTTCTGCTTCCCTGTATTTATGTGTCGTATGTCATGTATTT TTTACTCGGTGTGTCGAGTTGTAGGTTCTTGGTCGAGACAGGTGCGTCTCGTCAGCACTGGACAGCTTTG GTCAAATGCAATGGGTTTAGAGTTACATGTATTATGGTAACAATGTAGTGATTAGTGAATTTTATTATGC TGTTATTAAAGAACATATAGATTGTTGTCGTAAAAATATAGAAATATATACAAATTCTGCGTTTTAATTG TCTGTTAGTAGCCAGAAGGGTGTTAACTCCTATATACTTTAACACAGATTAAACATCCTTTTGACTACAA ACAATCGAAATAGAGTCTCAAGAAATGTCATTCAGATTGAACTAGTATATATGCAATTTTGAATTAAATT TTGTTTTGATTGATCAGGTAGATGTCTTTTTATTTAAACTTTTTTTGTATGAGAATTTTTTGGAAAAGGT TCACGGTGATTGGTACCATCAAATATACTCATTTTGAATTAATATTTGTAGGAATAGTCCCTATTCAAAA TTTGAAATGATCAATAATACTCAAATTACAATTCATTTTTACGTTTGAAATGCAATCTGCATTTCTCTAG CCAAAGTAAACCATTGAAATTTATCAAGAGACTGTTCCCAGTGCAGAGCCTTTTTCAGACATGATACAGT GAACTGCCTCAGAAAAAAACTACTGCAACACAATAAAAATGTTTAATGTGTAAACGAATGACAAATGGTG AAAACAAAGAAAATAAGAACATGAAACATAGGCCCCCATGTCTACTGTAATCATCTCTCTGTGGTAATAT ATCGTCTGTTTGGAGCCAGAAGGGCTTTGACTGATATACTTTACAGCGTTAACAACCTCTTAGCTCACAA GTTAACACACTTCAGGATCCAAACACATGATATCTATATTTCAACCTCGGCAGTTCTGTCTATCAAATTT GAACCGACAAGTTCTTCATATTGGGTGAATATATGAGAACGATGATATGCATGCAATATTTCCTCTGTTT AGAGCCACAAGGGTGTTAAATCGCACTCTTTATCACAGAGTTAACACCCTTCCAACTCTGATCAAATGAT TTGTTTCATCAAATTCAGGTATTTGTAATCTCATGGCCTGCTTCTTCTCTATTCATCCCTGTTACATTCA GGGGGCGTTTCATGAAACAATTAGTCAGTGGTTTCACCGACAATTTTATCGCACCGAATATTTTCCAGGC CTCTGATTGGTCAAATTTAGTCAGCGCTGACAATTGTCGGCAGCCCGCGGACAAATGTTGATGAAACGCC CCCTGGTTGCCATCCATGCCATATGTTTTCAGCTAAGATAATACATGTACCGGCAATGGAAGTGCAGGAA ATGTGTAGGAAAGCATGCATGTCCTGTACGTAATGATATTCTAATGTACCTATACCATATGCTGTGCAAA AAAAAAGGCTCATGTGCAGGTAACAAAGTGTGTACAACACGGCTCAAATGACCCCAAATATTCACAGATC TGTTAAACACGGAGAAGTCAGACTTTGTGCAATTTAGAAAAATCACTGCCAAAGTCATGGAGGTGTTTCA TGAAAAACCTTTGTTTGCCCTCCTGAGAAAAAAACTTCCACCTGTGTTCCATAGAATGTATCGTGAGCCA TAAATGAATAGATTACATAACTTTCATGAGCACATATCCAGTATATTTGTCCTGGTGGATTTACAATTTT GTACAAATGACCATTATTTGCCCAAGCCCAGATTGTATCTACAAACTGGATTATTGGAAGCTCTCTAGAA TTGTACAGGTTTGACACATGCTACACTATTCTTCTTTTTTTCTTTTCCTTTTTTTTCCCCATTTTTTTCT TTGTTGCTGCATCAGTTAGGTTAGGCAGATCATTGCACCATGACTGTGAGCAAGGCTTAAAAGTGTAAAT GTTTTATGTTTTATGTCATTGAAGAGAATGGATGCAAATGGGACACAGAATTATGTATATGTACTTGTAT CTGAATAAAAGATAAGAAATATAAGTTGTGTTGGTGGATTTACATCTCTATTGAAGAACTATGTGGGGCT TTTTTTTTTCCTCCTTTTTTCTGGTAAAGAAAGTAAGATAAATAAAGAATTCATTCTTACAAAGCTGTAC AAACATTTATCAAATGGTTATAATTCATGAGATGAGAAAAAAGAGTTCTTTTGTTTTTGTAATAAACTGT CTAAGTGATATAAAGAAATGAA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds