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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
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>JT113944.1 TSA: Strongylocentrotus purpuratus WHL22.234926.1 mRNA sequence CTTATTGATTGTAGACCGTGTGATGCGTGCACTGACGAAGCCCATTTCCAATCCATGACGCACATACGTT TGCAAACCTATTTTCGGGAGGCTGTGGTGTTATTTAATTTTTTTAACGAGACTTAAGTAGTCAAGTGACA GATTTGATTTTGGATCCTTTCTGCAAAGTTTTTCTTCATACAAAACTTTTGCTACCACCAATGTAGTTAT GCTACCACCAGTACCAGTGTAGGTATATGGAACCGTGGCCGCTCTGCGACGGTATGATGCACTACGTGTA GCGCTTGAACTCACATAATTCAGTAACACGAATGCTTGTAGGATTACAGTGCTAACTAGCCTGTAGCCGG TCATTTGATCATTTTGGCAAGGAGCCTAAATTTCTTGGTTTTGCATGTGAGAGCCCCGTTTCTCTGATAA TGTACAACGTCAATAGCTTCCAGCAATACTTAGTTCCTCGTCTCCATTAAAACTTAGGATTTTCTTTTGG TGATTAACAAGTTTGAAACCAACCATGACGACGGAGATTTTAGACAACAATAATACGGGGGAGATGACCG TGTTGAAGGTGTACGAACTAGCCGCAGATGCCGGGAGAGAATGCCAACAGCTGATTGAACAGTTTGGGCA ACACAGTGCGAATAATGTTACACTAAAAATCATTTCCATCTTGGAACACTTGGAACTTCTAGGAAATGAG AAGACAGAGTGGAGAAGAAAGTTAGCAAATTGAATGATAACCTTGTCACCTGCCAGAATGAACTATCGAG AAAGACAGACGAAAATGCTCATTTACTAATTGATCTCCATAAGATGGAAGACCAGCACCTTGAAGATTTA GAGCAGTGGAAAGAATTCCTGAGTGAGGCCCGGAGAAAGAACAAAGAGCTCAAGAAACAACTAAATGAGA AGGAAGGGCAGGTCAAACAAGAAAAAGTTATGGAGCAAGAGACATTGAAGGTGTTACTGAAGCTAAAAGA GACGGTGGACAAACAGAGAGATACGATCCGAGCGCAGGATAATGATCTCAGGTCTAAAAACCAGGATGTG GAAGCATTGCAGCAACAAGCTGATAGACTTGTCAAAGTGAACAGCAACCTGCGGCGGAAACACGAGCTAG TTGAGAGCCACTCTCGGAACCTGATCCGACAAAAGTCCACTCTACAGGTTGATGTGATGAGACTGAATAA GAACCTGATAGAGCAGAAGACTATGACAGAGATAGATGAAGCTGATGGCACCATGAAGGACAATCCTGAG GTTGACAATAAAGAAGGGGAGAATAAGATGGCTGGTGACCTCTCTCATGACCCCAACCGACCTCGCTTCA CTCTGAATGAACTCAGGAAGGTCTTGATTGAGAGGGATGAGATGCATCTTAAAGTAGTGGCCTTGGAAGA AGAACTGGAAACATACAGAGCTGAAGAAGACCAGACAGGGTCCTCTGCAAATACTTCCTCTCCTTGTCAA CAAGAAGAAAACTCTGGCAAAAACAAGCCATCAGGAATCAGAAAATTCTTTGCAAATCTGTTCAAAGGAA AAGACAAAACAGATGTAGAGGAAGAGTTGAAAAAATGGGAATTGCTAGACCTCGAGCAAGAGGATTTCAT CTCGTCTACCGAAGATCCTCTCACCCAATCTGTCCAATCAGAAACAGCTATGCCCACCACAAGAGGGAGC CCTAACACATATACTGAGAGATCTAGACGTCACTCTGACATCACACCAAGCAGCAATAATAACAATGAGG CTCCCGTCCCAGGCAAGAAAAATGACAGTTGGTTTTTTGGATCTAAATCGCGATCTCCCAGCAAGCCCAA AGAGATGGTTGATATGACATCACCTAAGGCTTCTTCATCACCCAGACGGTCAAGATCATCATCACCGAGT GATCTACCATTGCCAAGGGCAACCCCTCCACCTGTCAGACCCAGTAAGGATGAGGATGAGAGTGAGGATA GAGAAGGTGTCTCAAACACCTTTTCTCTTGATACAAATATCATGCCCATACAAGCCTTGATGTACCCTAA TTTCTAAGTATCCCTAACTTCCTAAGTTGATCAAAGACATTCTGTTCCGTTTATTTCTCATTTCTATTAA ACATGTACTACGAAGATACAATATAGAATTGTATTCATGTTTATAATGCAGGAAATTGCCTGTTGTAACT TTAACAAATGCAAATTTTCAGTAAACCTGTATTGTCCCAACTGATTATATAAACTCTATTGCTATTATGG CAGAAGGGTGCTAATTTAGTATCTTGTTAGAGATAATGCTCTTCTTGTTCTCTAGATCCATACTGCAGTA GGTCTTCCAGCCATGAGTGAAAGAACATTGTAGAACTCATTTGAATTAAGTCTTTGACCTGGAGAGGACC TCATATAGCATATACAAACTAAATAACATTATATGGAGTTTATATATCTGTATTCATAACTAAACTAACC TGTCCAGGGCTTATGAATAATGCTCTCAGTATAACACGGCTTCTAGGAATTCCCAACTTATTTCATTAGA GTCAGAAGGGCATTAACTTTACCTAGGTGATATGAGTTAATACCATTCTGGCTCTCTATAGATGATCTTA ACCCATTACATGTTGGAACCAAGTGGTATGTGTACTAGCCTATGGCAATGAGTGAATTCAGGAGTCAGGG GGTTAGATAGTTGTCTCCTTTTATTGTGTGAAAGGAGTATTAAATATACCAATTTGTTTTTGTGTGTACA TTAATGTGTTTGTGTAGTGCAACAAGTATCTTTGTACCCAGTTAACACCCTTTGGGTTCTTCTCAGATGA GAAATGGAACTCAAGTCTTTTTCCTGTCATAGACTGCTTTGCCATTTGATGTACAATGCGCATTTGTAAG TCAAATTTATTCCTTGAAATACGCCGTATGCTGACTACAGCTGCCGGAGCTAAAGCTTGGGTAATAATAT CTAATCTTCTTTGCATAGTGCTTCAGGAAGTTACGTCATAGTGAGATATGCTCCAGACAAGAATGGTTTA TTCTTATTATAATTGTCAGCTGGAAGCGTTTCTTGAAGGAAAGAATATTTAAATTGTTATATCTTGTGAA TTTTTTTTCATGAAAATTATGATTCATCCAATATAATAAAAATTATAGCAAATTATAAATCAATTACTGA AAAATTACTGGAAGTGATTGATTTATAGTTCGCTATTGTCTCATGAAAATTGTAATTTGTGTATATATTT CCTTGCCAGAATTGGACATGAATTTCAGTTGTTTCAATTAGAAAACTTGTCTACTAGTGTACTTAGCTTT TGTTTATTCCTGAAATATCTTATATATCTAGATGCAATATAATGTTCTAACTTAACCTTTATGCTTGAAA TGTTGGCATTGTTATATAGCTAATATCTTTCTTCTAGAGTTCCATAGACTAAATTATAAATAAAAAAACT GGTAATATGGTGAGCAAGTCTGCAAGCAATTTCAGTCTTCACAATTTTTGGTGTTCTCTAATGCTCGTTT AATATATGTGTATTATCATATATGTCCTGAATAAGAAATATACAGGTGCTCCTTCAGTTGCGAGGATTTT GGATCAGGTTTCTATTTTTCAGGTTAAATGTGAATGTGTATTACTTGAAGAGAAGTATCAAGCTTTTGAT TTACTACGTTAAATTCACACCCACAAAGATGTGTTATAAGAAGGAAGGTGATGTAAATGGGTACCTGGCA GGAATTAATTCTTTGGAAAGATAATGGCAGGTAATGGCAGCACAGCTAAAGCCAGGGTAATAATCTCCAA GTTTGGAAGTGCTTAGTGATTGTATTAAGTGCTATTTAAAAACTGAGTATTATTATTATTATGATAAATG GCGTGCATTCAAACATTGTGAACACATCTCCTGAATGTATTTTATCATTGAAATGTCATGCCTTTTAATA ATACAACTTATGAATTTAATTGGTTCAAGTTGTGTAGACTTCTGAAGATTTTACTTGATCGCAGAACTAA ATTTTCTTTACTGAATACTGATGCATAATACCAATATTTGTGTAAAATTGAATGAATTGAATGAATTGAA TGAATGGATGAATTGAGCAAGATCTAAATAATTTGTACCATTTTTTTCTAATGTTAAATATCTAAAGGCA TGTCAGTGATACTAAGTTAAACAGGTCACTTTCTTTTTACAGTGTACAGCCTTGTCTTTTTAGTAAAATA TACACAAACTTGTCAACCCTGCAACCTTTTTTCAAAGTGAATATGACTCATAAGAAAAATATGGTCTGAA ATTAAAAAGTTCAATGTCAAGGCAATTGCCTTTTTATCCATAATAATGTTTTGATTTACCAGTTTGCAGA TTTCTTTCTTTTTATAGGCTGATAGTTAAGGAGCAGATGACATTCAAAGAGTTCCCTATAGTGTTTCACT GCTTCAGATTAAATATATATATATATATATATATATATATATATATATATATATAATTTTCAACCAAGTA AATACATTGTTGCAATGTGCCATATACAGTTGACCAAAGAATAGTATGGTATTGAAATTATTGAACTAAA AGAGTTTCTCATTATATTTCCATCAGTCATGAAAACTTCATTTATATCATTTTATATACAGGGAAGTATC ATTACAATTGTGTATTTCATCTTTCTGTGGTGCATATAAAGTATATCAAATCATATTTGGAATTGGCTTT TGATAAAAACAAGGAAGTGCCTCATTTTATAGTTGAAAAGTGATTTAAGAAAAATAAAACGAAACAGAAA TATCAGGGCAGACCTCTTCTATTTCAAACAAAGAAACCGGGTGCTAAATATTTGTAAGCGTGGTGATTCA TTGTGCTGTGTGGTATGGAAACAATGATCGAGAGGTTCGCAATGTACAGTACAAGTATATTTATAGAATG CTGTAACAGTACTTTTGAGGTGAATATATGCTTTTTTAGCTGTTCTTTTTCAATTTTTGCCAGGTGCCTA GGATTTTACCCCAAACATTATTGTATTTTCAAATTTGGTCATTTAACTTTAGCAAAAGAAAAGAAAAACA CAAAATTTTAGAAGAAAACCAATTGCTATATCTGTAATTCATGAATAGACCTTTCATATTAATGAAATAA ATTTCAATAGAAAATGACTAACAAATTCTAGAAGGAAGTGGTTTATATTAAATCATTTATCATTTTAAAG TTGCATCTACATTTTGAATTCAGTACAGATGTGTTTTAAACACATTTCAAAAATGGAAACGACTTCATTC AAGTTAACCTTGCCATGAACTTGGGGATGTTAGTATTCACAAATTGGTTTAAAGTTAGAATATGATATCA CAAGCCTTCCCCAAATTCAGTATATTAAATTTCCAAAGAAGCTTTCAATTTTAAGACATTTTAGATGATT ATACATATATATATCCCACCTGTACTGTGTGTATATTCTAATGTTCTAATCAATCACATACTAGAGTGTA AAAATATATCAAAGGTAATATTGTTGTAATTACTGCTATTATGCTGGCAATCTCTGCTTGTTCACTAATA CATTAATTCATGAACACATTTTATGCAAAACTCTACGATTTCAACTCTTCCACTCCTTCAACATGTGTTT GAATGAGGGTTATATGCACGTTGCTACTTGTGTGAACAAGAGATTCAAATTATATTTCAACTTGTATTTT ATTACTCGTTTTGATGCTTTTTATACCATGATTTTCAAAATAATAAAGGTCTATTTTCTAGCCTTATCAT AAAATGAGA
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???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
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???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds