Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_776364.4 PREDICTED: Strongylocentrotus purpuratus uncharacterized LOC576015 (LOC576015), mRNA CAATGCACGCAATGCATGGGGTGCATTTTCGTCTGAGTCACCCCCGAAAGAATTGACAGTCTGTGGTAGG CAGTTTGACAGGTGGACTTAACGATTGTGCTGTTTATCTTCTCAGCGATTTTCGGCTAGAACGAAAAGTT TTTGGTTGTGAGTCACTTCGTGTGACACCGCATTCTTTCAACCACCTACTCAACCCTGTTGAATAGCCAA CATAGAGGGCAGTGCACCCACTATCTGAATAGAGTCAGTCTTAGCTCAGCCATCATCCAGACAACTAGCT GCCTCACCTCTGAAAGCTTTCCAGCTTCGAAGTAGCCTCCCTCCTCATGACTTTGGGTCACTGTTTTAAA TTGAAGACATCAAGTCACCCTTTGAACTTGGAGAGAACTAATGGCCGCACTCCTTCACGATGACCTCAGC TCCTGATTGAGCAATCCTCGGTTTCCTTGGGACCATTCCATGCTGAATACCTAGGATTATCAAGGATTCC TTTGCCCACAGCGCGGCAGCTGTTGCTCAAAGCTTCACGGCCGGCCGCAGGTCAAGACATTTCAGGGAAT AAGACTGTGGACCGAGCGAGCGAGCTCAAAAGAAAATCCTTCAGAAATCGCCCGTTATCCTTCCCATCGA TGAAAAGTTTGCAGTCCCAGTGACATTCTTGTATGATTGACAGCCACTTTAACCAATCACATGTTCAGTA AGCTGGGGACCACACCCAACAGTTGCCATGGGTAACGACGTCCACTGCTTGCGCCCCAAGAACGGGGCGT CGGCTGGGCTGGAGCCCAACTGCTTCAAAGTGCGCAACGTGAACGAGTCCGGGCACGTCGTAAATAAGGG TTACCTCGAGGTCACGCAGACTGACCTCATCCTCCATGTGGTCAACGCGGAGACGGTCAAGTGGCCGTTG AGGTGTCTCCGTCGCTACGGCCATGACGCCAACCTCTTTTCCTTTGAGAGTGGGCGGAGATGTGCCACAG GACCAGGTATCTATGCCTTCAAGAGTAAATATGCCATCCAGATCTTCCGATTGGTGCAAGAGAATGCACA GCACACCGAGGAGAACGCTACCTCTCCAACCACGCCCTCTCCAACCACGCCCAACCTCCCCGCCTCGAGG GCGTCACGGCAACGGAGCCTCAGCAACGACACAGCCTTACCCCCGAGTCAAACCATGAGCCGGGCCAGCT CCAACGCGTCCGGGGTGAACGGTGCCGCGCACGGTGTCGCCAACGGGAGCCTTTCGCCGCATCCCAGCAT CAGCTCCAACGTCTCGTTCCCACCCCCGACCAGTCCGGGCCCGCTTTACTTCAACGGGAATGGAAGCGTT AGTACCTGCCTTAGGATGTCGCCCATCTCCCCTACCATGCAGTATATGAATTCAAGTGCTTTTGGAGATA TCCCTGAGTCTCCTCTTGAAGGGACTCCCGAAGATTCTCTTGTAAATGGTGTCATCCCTGAAGAAGCAAG TAGTCACAATGTCAGTTCAGACAGCTTTGGAGATCCTGCACTTAATTACGCGAGGCTTAAGCTACCGTCA GACGAAGATAAAAACAATGGGGGTGATGCTCAGCAGAACACTGATGATGAGGAGAGGACAAACTCAGGGG AAAGGAAGGAACAGGGTGAGGGTGATGAGGAGAAAGAAGAATCAAGGATTGAGAAGAACGATGAGGAGGT TGGTGATAGAGGAAGTGGAGCGAAGGACAAAGATGAAAGTGGAATCGTAGCTGAGCTGGAAAACAGCGGT GAGAACCAAAGCGATGATAGAGCCTCAGGGTTAGGATGTGATTCAGGGGTAGGAGAGGATAAGATGGAGG GTAAACCGGAAAAGGAAACAAACTCTAAAGAAGAGGAGGGAAAAGCCCCCTCCTTGGTGAGCCATTTGAA TTTGAAAGATGATGGATCATCAAAGAATATATTAAGTGGTGAGGATGTCGAGGAAAAGGTTGATGTCAGC CATGTGATAGTGGATGAGGAGGAGAGAGGCAAAAGCGATGTAAGGTTAAAGGTCAAGAAAAATGGAAAGC GAGAGGTTAGCGACATTGAAAGAACAACAGCTTTATTACAAGACGTCGCAAATGGCAACATCCGTATGAA AGATCGCAATGTGGACGCAGACTCCCAGTTAAACATTCTTGTCAATTATGCAAATCTAACTGAACAACAG ATCCAGGATGTGCTCCAGAAGCTGGAGACGAGTCGTAACGGTAACATATCCCCCTGCACCGTGTGTTCCA ACTCCTCCAGTAACGCCAGTCAGTCAGCCAGTCAGCGCGTCTCGCCGCTTTCGTACTATGCAAATTTAGA CACGGCGGGTGAGCTACCACCCAACTGGCAACCCAACGGGTTCCACTCCTACCCCGAGCTTCGCACCCCG CGAAGCACGTCCAGCAAAGGCAGCACGGGATCAGAGTTCACCTTTGAGGTCAGCAGAGGGAGCTGTTCGC CTGTGGATCACAACTATGCCAATCTGGACACGTTACCAGAGGTGCAGCCTTTGCGCCACAGTCTTTCAAG CAACGGCGCCGCCACCAATGGCGCCGGGAACTGGATGATTCTTCAGCCGCCACCGAAGGGCAAGGTGAAC TACATCCAGTTAGACTTCGACGAGAATGACCAACCGATCTTCACAAATATCAACAAAACGCTTCGCCGCT CCATGAGCTCTAGCACCAGCACCACGCCGCCCAAAACACCGGTTTCGCCTCCGACAGAGATCGTCCCAAC CGTGCCCGGTTCTAAGAACGATATCTACGCCAGGATTGATATCGAAAAGACGGTAGCACTCGCGAATACG CACAGGCAGGTGGAAGGAGATACAGACATTTCGACGCGCAGGACACGGCATGATGTCTGGCCTGACAACA AAATTCGGTGATAGATCGATAGCAAACAGAACTCGCCTGATAAATTTACAATCATCGCTCATTTCCGTGT GAATCAATTTTATTTCCTTTGTATGGCCAAGTGCCTCTGAATGAACAGGAATTTGGAATTAATCTTCAGC TTTGTACATTTTATATGGTATTAGTTGTAGGAACACCATGAAAATTGGAGCTAACATTGATCAAATCTGT TGAATGAAAGAGACGTTATCATATGTACTTGATAGAATTCATTCATTGCCATTCCAAATGTTGGGATAAT ACTAAAGATATATGCATGAATACGTATTTCAAATACACATCTTAAGATCAGAATTATTTAATGGGCTGTG CATGTGGCATTTAACATTTTCTAATCAATTTAAGAAAATCAGGTTTTGAATTGTGCTTCAATCTATCCTA CATAAAGCTTACAGGGTAAAATTATAAGATTGACGTTAATAATGAAAAGCAGACCAAATTAACGATAGAC CAGTTTCTCCATCTAGATAACATGTTAAGGTGAAAATGACCCCAAATATCAACTGATATAGCAGACATGG AGAGTTCCCACTTAATGCGTTTAGAATATAGTTATAGCATGAACCATCAGTGCATAAATGAATGATGATA AGCTTCATATAACCTTCATGAAAATGCATCCAGCATTCATCTTAAATGACCTTTGGGTGCGTTCAAGCGA CACTTTTTCACCCTAGAAACGCGGCCTCAAAGTTGTTTAGTTTTAAACACGTTTGCGTTCAAGCAATTTC AAGCGTTTTTTTTGTCGGTCATAAAATATAAACGTGTTTCAAAATACAAACATGAAACGCTGAAAAAGAT GCATTTTTGTAATGTGATTCTTTAGAATCTGGCTTAAAATCGCTCGAACGCAACAGAGATCTCAATCATG ATTCTATTATGTCATTATCGTGGCCTGCTTCCGGTTGATGGAAAATCGCTTGAACGATCTCCCGTAGTAA CCATGTTTTGTAACAGCGTTTTGCTTTGTGATTCATGTTTGTGATTCTAGATTAAAAAATTTCTTGAACA CACTCTTTGACTGACCATGCATGTACAGATAGTATCTCCATGTAATAAAGAACTGGCTTTCCTTTAAGAC GTGAAAATATCTGTATGGACAAAAAACTAGTACAGAGTATGCAGTACCTTGGACAATTATTGTCCTGTTC ATCTCATTATGTAGGTATCCCAGGGTATATCTCTTAGTACACGTAGATGCGACTTCATTAGGGTTTTTCA AAACCAGACATTTTTTACACGGCAAAGCCATATAAGTCTGGAACTGACAGGAAATAAACAAAATTCTTCC TAATTGGGGACAGTCCCCTTCATTAAAATGAGAGGTTGTTGCGTATAATGGCACTTATCTATGGCTTCAC CATAGCAGTGTATGCTTACATGAACATGTTTTTGTGCAGGAGAGATATTTCTAGATGAAAACAAATTATC AAGATTACAAGTTCGATGGACCCAATTGTTCACTTCTAACATTCATTTTTTGATATTGATCATGAAACAA ATTACCATTTAAAAAGCGAAATCATGCAAATTAGGTGATCAGTTCGACTGTGTTCATGTAATGGATACAT GCATGCAAATAATTTTTAAACATGTACACTGTAATGCCATCATTACTTAACTTTATGGAGAATAATTCCT TTAATATGTACATGTTGTGCACATATTTGTGACTATCCGGTAGTTCATATCTTTGTTCGCTTATTCTGTG GAAATCACTTTCTATTAAACTCTACAAACTATTTTCCTCCTGAATGGCAAAAGGAATACTTACTTTAAAA AAGAAATCAACAGTGCAAAGGATTAACGGTATACAGTTGTATTTCTTGTCTTTGGAATTGTTTTGTTTAG TTAAATAGCATTCACTTAAAATGCAGACCCTATTATTTGTATATGCTGTATTCATAACTCTATCTATCCG AGATCGATCCATTTCGAGAATGTTCTAGTTTATAAAGATATAATGTATACAAGTGTGTGTATATATATGT TTTCTCTTTTTGTATCACAGATTGTTGTACAATGTTTTTTTTTGGTGGTGTTTGTCAATATTTTAACACT TTTGAATGGCTGGTTCCATGAAAAAAAATGTTTAAATTATGTCAATTTACATATAGCATGGATGTTTGTA ATACCTCATTTTTATGTCATTGTTTACACATTTTATGTACATGTAAATGTATTTTCCAAGCACTTTGTAC AGATCATGCATTTCTATTCATCATACATGTATAATGTACCAAGCAAAATACATGTAAAAACCATGTTAAA AGATCATGTTCAGTAATTGTAACCTTAAATGTGCCACTAAATAAACAAACATGTACAGAGAACTTGTACA TGTACCTATGTATCTATCTCTTCTAGGAAAAGATTAATTTTTAGACCTAAATATTACATATTGTTCTTCA AATTGGCAACAGTAATATTTTAAATTTTAATTGCTACATTGTTGAAATAGAATGCAATGTTTCTGAAAAA AATATAGAAATTAAAATATTGTTGAAAAGTTGATTTAAATTTTGTGATTTTAATAACATTGATTTTGAAT CTCTTGTGTTGCCAATTTATGAATGTAATGCTTGTTTCCTTTTTCAGATTTCTGGCATCAAAGACAATAA ATTTGAAAACAAACACAGTGTGTAGAATTTTTCACCCTTTCTTCCCATGTATCTAGCATATATTTGGGCT CTGAATTATATGTTAGTATTGAGTAGAACCACAACATGAAGAAGGATTGTCACGGTATAGTTCTTAATCA TGATATTGTTATTCGTTCATTTTGATATTAGTGTTCCTTAGTATCAAACGTTAACAATGCTTCCTGTGTA ATGCACATTACATCCTTCCATCCCTAAACTAAATCTGAAAGACGAACCTTACCATAAAATATCTGTAGCG GGTACTCAGCATACCATACATGTATATGTATGTGCTAATATCAGTACACAGCGCACTTCAAATTGAAAAT TGAATAGATCAAATGAATTGAATAAGGTCTATGTAGACTCCTAGTTGTACATAAAATCTTGATTTATAAA TGTGAACAGAATATTGTACTTATATGTTGACAATCACAGTTTAACTGCTAATTAGATTTGAGGTTTAAAA CACAAATTAATTCAGTTGAATTCAGTCTGTATTTTGAATAAAAACTTGAATAACATAATTTAATTATTAT AATTTATTTATTAATAATTAATAGCTTGCATAACGTGCATCTACGGTGTTTTGTATCCTCAATCCCTTCT AAAACTTTGCAACTATTTGTTCCCTTTTTTATAAATGAATTTTCTCCTTTGTGCAACTCAATCATGAATT TTTTGAAATAGTATATAAATATATATATATTCTTTGTTTTGTATGTTTCTGTTATGAAGTACTTCAGTTT ATGGTCTTTTTCATGAAGTTATTTTATTTGTTGTTGATTTGTATGCATAAGACTTACATTGCTGTCAATG TATACAATTTGAACAAAAACCAAATGTGTGTGGTCTTGATGAAATTGTAAAGAATTTTTTTGGTGATAAA TGTCAAATTATACGGGGTAATAAATTGTGAAATTTGTACCAAAGCTAA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds