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Echinobase
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030986365.1 PREDICTED: Strongylocentrotus purpuratus C-terminal-binding protein 1 (LOC575207), transcript variant X3, mRNA ACACATGATCGAACTACTTCCATTGAGTTAGTACACATTCAACCGTACACCCCAACATAACACACAAAGT CTCGGCACACCAGTCTTTCTTTTATTGGTGTACGGTTCTTCCACTTGTGACCCCGTCCGTAACGCGAAGT ACCACGGCGAAATATTCATGAACTTGCCCTAAAGGAGTCACGGCTTACGACCTACCGTTGAAGGATTCGA ATCGAATGGACGGGCGTGTTCTCAAAGACTGTTTTGTTGAACTACCAGCCGTTCGTTCCTCAACTTGACT GTTCCTTTGGTTTGTGAAAAACGACCCATAGGAATTGCTGAGGTGGTTTATTTGTCTGCAACATTTGATG TATGATTGCTCCTGCAGAGAGGGAAGGAGAGAGGCTGCGTATCTGCAGCTGTCACTTCTCAGGTGGAGAG AAGAAAGAGGGGGACGTCCCCGTACCTGACCCAGAGGTGGATGAACCTATCAATATTGACATCAGTGCCG CAACAAACAACAGCAACAGTAATCATAGCTCGCCTTCGCGTTGCCTTATGGATAAACAGAAGCGGGCCGC CAAGCGCCAAAGAATGTCCGTAGAGAGGATCGTTGAAGGAATCCGTCACCCTGCTACCACCGCTGCCTCC ATGCCTGCAGCCACCCCTGTGCAAGGTCGTCCGTTGGTGGCGCTGTTAGATGGACGGGACTGTAGCGTTG AGATGCCCATCCTCAAGGATGTGGCCACGGTGGCATTCTGTGATGCACAGTCTACCACAGAGATACATGA AAAGGTGCTAAATGAAGCAGTAGGAGCCCTGCTCTACCACACAATCACATTGACAAGAGAAGATCTTGAG AAGTTTAAAGCTCTCCGTATCATCGTCAGAATCGGATCTGGATTCGACAATGTGGACATCAAAGCTGCAG GAGAAATGGGTGTAGCAGTGTGTAATGTCCCTGGGTATGGTGTAGAGGAGGCCGCAGACTCCACACTGTG TATGATCTTGAATCTGTATAGACGAACTCATTGGATGGCTGAGATGGTCAAACAGGGCAAGAAGCTTTCA GGTGCTGAACAGATCAGGGAAGCCGGTGCAGGAGCTACAAGAATTCGCAACGAGACTCTCGGGATTATAG GAATGGGTCGTGTTGGTACAGCAGTAGCTATGAGAGCAAAAGCCTTTGGATTCAACCTACTTTTCTATGA CCCCTACTTGCAAGATGGCATGGAGAAAGCATTTGGATTAACCAGAGTCTACACACTACAGGATCTGTTA TTCCAGAGTGACTGCGTGACACTTCATTGTTCTCTCAACGAGCACAATCATCATCTAATAAACGAGTTCA CCATCAAACAGATGCGTCAAGGAGCTTTCCTGGTCAATACATCACGCGGCGGTCTCATCGATGAGAATGC CCTCGCTCAAGCACTCAAAGAAGGTCGCATCCGAGCCGCGGCGCTTGACGTCCATGAAACGGAGCCGTTT ACATTTACCTCAGGTCCTCTCAAGGATGCTCCTAATCTGATCTGCACTCCACATTGCTCTTGGTATAGTG AGCAGAGTAGCACAGAGGTACGTGAGAGTGCAGCCGGTGAGATCAGACGGGCTATCACAGGACGCGTTCC TGGTAACCTACGCAATTGTGTTAATAAAGAATACATGATTTCATCCTCGTCTGGCGGCCAATCATGGTCA GAGCCTAATAATCCATCTGAACTTAATGGATCAGTGTATCGCTATGCAGCACCTCCCGTTGTCGTACCTC AACCAGCTCCTCAGCTTGTCGCTGAAAACCACTCCATGCCAATGCCAATGAATGTAGTGTCCACACCTGT GGTCAGTAGCGGTCATTCGGACACTAAGGCAGAACCTGAACAATGAGAACCATCATGAGAGAGAGTGTGG CAATCGGACCCTTCCAGTCAGTCATCATGCCTCAGTAAATCAGAGAGGCATTTATGTGGTCTTACCAAGT AACCAAAAGAACTTGTGGATTTGTCTTGTATTCTGTGCCAAGGCAGTATTTACAATTTTATGGAAAGAAA ATAAGATCCTTGTAGAAAAAAAAACGTAGAAACAAGTAGGCCCAACACACGCACTCCGTAGAGCAACTCA TTAGAAATAAAAAATTGAAATGAAACAAACTTTCTACCTACCACCGAAACAATGAATTGCATAGAGATAC TGCTGTATAAATATTAGCTGAGCAGTATGTAGAAATCTTGTCTTGTTTTGTCAGAGTGATATGTGTGCAC ACAAACCAACCCCCAGTTCACCTATTTGTAATGTATGTGCATGTTTAGTGGAATTTGTGCCCAAAAGTTA TATATCTTCAAGAGGAATAACAGAATTTATGAAAGCAAATATATATATCAGTGAAATCTGGAGACTGGAA TAATACACTGAAAGCTAGTACGGTAATCAGAGAAAGAGAGACGACAATGGATGATATTTGTACAAAGGAA AGTGGATTGTCATTTTGTACTTGGCTTGCTGACATTATGCAAAGGACAGCAACACATGTACAAGGCATCA ATTTTTTTTAATTTGAAATCTCCTACATTTTGAGCTTTTCTTTCAACGTTCGCTTGTGTCTTCACATTGG TTTGTTTCATCTTTGAGTTTGGAAATGCTGACTAACGGAGAACAGAAGACATCACGCTTCAATCGTCTGC GTGTATTCTATGATTTAATATGATGGTTGTTTCAATAATGTTCCTTTCTGTAATTTTGTTCATGCGCATT AATTAAGCTTCATGTGGATATCATTTTGATGACTTTGTACAATGTTGGCTGCATTTCTCACACAAACTGC AGCAAAAAATTAGTAGTTGTAGAAATCATTTATCTGGAAGCCTATGGATCACATATTGTTTGTATGATTT TGTAAGGCTGCGTGTTGAGTTTTGTATTTTATAACAAGAAGAATGTTGAAATACTGGAGTGCTTGGTACT GGCACCTGGCTTCGTGATGTAATGTTTGATGTACTTAATGCAAATGATGGTTGAAGCTTGCTGCTCTAGT AAGAAATGATTCATATCCTTGTCTTCTTCATTTGATACACTGGTTTGGTGTTTTCCTTTAACATTTCATC TTCCATCCCCTTTCATATAATCAGATTAACCTCTGGACATCTAAACGTTTCTTTAATGGTAGGAATGATA AACGAATTGTAAACTGATAATCGTACAACTCATTGATTAATTACCAGTTATTAGAAAGTCTGATATAGAA AAAGTTTTTGCCTTTTTTGTCATTAGGTGTAAACAATTGGAGCACCAATTTCAAAAGGATGTATGACTTT ATGTATCAAATATTGGCTCGGTCCTTAATCTCTGTAGGCAGACTTCATTTTGTTTCCTCCTATTCTGTTC TCTCTTCTATTCCTTTCTTGTCTGTTTCATATATTCATGTTCCAGAAGTTCTAATAGACATACAGGTTAT TAATAGGAAACTGAGTAAACTAGAAAGTTCAATGATTATTCATTTTCACAGAACAAAACATGTATGATGT CCAGAGGTCATGTGACCAAAAGAAATGTCACATGACCAAGTTGAATTGTGGAGACCTTGGATTGTATCTC TTGCCATTACTAGAAAGCAATTGGTTGGATAAAAAGAACACCATTCACATTTGCATGAATATTGCCATCT GCAATTGTATCATGTATATCATAATCATTGCACTGCCACTACTTGGTTTTTAGAATATCGGTTGATCTAT GTTACAGTTTATTTTTGTTTTAATTATCTTTATTATTATTTGTGTGTTTGTAAGCTTTTAAGGTTGATGG TTCCATGATACCAAATCCTAATGAGTTATGTTACAGCTCTATTGTAACATGAATTGTAAAATCATACTAT TGATACATGTACAGGGGAAACGAGTAAAACAAGATCCATTAGAATTTGTGTTCAATCTTGTATAAAATCT TAGAAGATAGATACTCATAGATTGTTCTGAAAAAAATGCTGGTTTTTTAAACTTCTTCATATTGTTTTAG CTCATTTTTGTGAGAACGGATTGAATGGCCTGAATATAAAGAGAAAGCTTGAAAACTATAATATTAATCA GATTGAATCAGAACGTACTGTTAAGATTCTACCAACAGAAGATCCAAATTATGATATTGATTGCTGCAAT CAATAGATCCTGAAATTCTTTTTCATGAGAAGTTCATGTGGTTTGCAGTCATAAATTTGGTTGGACTGAT TTTTTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGAGGGGGTTGTGATCGGTATGTGACATGCATCA TGTGTATGATACAAAGCAAACATAGAATGTAGCTTTCTGAATGAGTGATCTCTCACTATCAAGGTCAATG ACCTCAATCTAGAAGGGTGAATGAACTTTTCATAGGGTCGGTCTGAATGTAGGTCACTAATATTGTTTTG AGTATGTGTAAACATGGGTTGGAGTTTAATGTTGTAATCTTAATATTGTAAACAAGCTTTGTGACCGAAA GAATGTTATTTCAGAGCTTGTGATCTTCTCCTCTTCTTCTTTCATACGAGGTATCAAAAGAGCAAATCCA TCTATTTGTTAAGCTCTCTTGTTGTTGTTCACCTAATAGAAGTCAGTTAACAGGGGTAACCATGTGGAGG ATCGCAAACTTGAACCCTGTTTACATTTCAAATTCTCTTTGAGTTGATTGTACTAGATACCATTCATAAG TTAACAGGTAACCCTTAGCTGTGGGTATAATCTACTGTAATAAAGCTATTGTCAAGCTTCTCAAATCAAG GCTATTGAAGACATGATTTCAAATTAGAGTTTGTTTTTACCAATGAATGTTTGATTAGTGCTGTACTGCA AGCCTCCCATTGATTTAAGAAGAAAGAATTTAAAGTACATCTATAAACAGTGGGAACTGATTTATAGAAT AAGCATGCGAGTTGAAATGGGATCATGTAGTTATTTTATATTATTTTATTGTTTTTGTTTTTATTTGTGT GATTTGCTTCTTTTTAAAACGTTTTTATGCAATCCATATCATTCAATTTGTCTGTAAGCACTTGTTCAAC ATTTAGTTGCATATGGTGTGTTTGATAAGTGATTACACTTAATAGCTATGAGACTTGACTTGTCTCTCTT ATTGATGCCTTATTCAAATCATTCTACAAAGAAAGCTTTAGATTACATTCTTTTTGTAGATTAGAATTTT ATCTGCAAATTATTGCACCAAAACTTTGTAAACAGTTGCTTGTTGCTCATCATATTGTATACTTTGTAAA TTTACAATTGTTTTGTACTGAAAATGTTAAAGATATTTGTCCCTAAAAGTGAATATTTTTAGGTGGCTGG TCGTATTAAAGCTCTGTAATTGACTTGGGTGCAGAGTTGAAGGATACATTGCTGTTGTCTTATTTTATTC CACCCATTATTTGGTTCCAAGCAGAAGTGGATTTAGAAGAGAAGAATAAACGCATGTATCAAAACTCTCT CAGGTATCACAGTATCAAATAGTCTTTTGAAAGAAAACAAAATCTTCCATTGGGTTGGTAACAATTTAAC TTTCTTTCTTCTTAATTTTCATTGTTTTTATGCGAGGCATTTTCATAATTGATATCAAAGCCTCATGGCA ATGAATTTGGAGATGTAAAAGCTAATCCCAAAATGAATTGCTAATTTCACATTTTAAGTTAAGTTCTTTG AACTGTATTTGAAAAAAAAGATGCAGGTAAAGTGGTTTATATTACTGATTTTCTTTTACTCTCTTCTTAA ATTTTGGTTGTCAATTTTGGAATTGACAATCTGTTTTTACCATGGAGTATTCAAATGTTGTACATGTCAT TTTTTCCTGGAAATTCTGTTTGACTTTTTTTTTATGTAGACCATCCTTATTTTTGTAGCATATGTCCTCG CCATACCGTTCACACAGGCACCTTTACAATAAATTGAAAACAATGAGTGTCGGCCATGTTAATAA
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds