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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
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>JT116777.1 TSA: Strongylocentrotus purpuratus WHL22.109980.4 mRNA sequence TACTAGTAGGAAGTACCACTCTGTTAATCGAGGATCAGACTAAAATAAATCGTGATATACCTTGCTCTAC CATGGAATAATATATGCCTATCAAGAAAGGAATAATCGACAGAACTACAAATAAGATGACGGACATGGAC GTATTCAGTTTCCTATATGCGAAGAGCAAATTCAGGCTAGTGGCTTCGCCGCGGATACCACGTTTATCTA TTTGTGTGATGGTATTATGTACAGTGCTAACGTTACTACCGCATCGTATACACGGATCATGCATGTCGGA TGGAGACTGCGGAGTAGACGGCGTCTGTGAGAGAGGATCGTGCGTTTGTGCTGCCGGGTGGTCGGGCGAT GTGTGTGATCACTGTCAAGGAAGAACTAGGTTAGAAGAAAGTTCAGGCTACATAATAGAAGCTTTGGATG ATTATCAAGATAGAAGAAAATGTACATGGCTCATAGATGGGGGCAGGCCCGGAGCAAACATACGCTTCAT CCTCCAAGAGTTTGGAACAGAATGCAGCTGGGATTATCTCTATATATACGACGGTGACTCAATCTATGCG CCATTAGTAGCATCACTCAATGGTCCAATAATTCACGATACAGTTGATATCAATCATGAGATCCTCACAA CGTCAGGCTTCGCCTACCTGTACTTCTACAGTGATGCAGCATTCAGTCTAGATGGCTTCAATATTTCATA CAGCATTGAAAGCTGCCCGGGGAACGGATGCAGCGGCCACGGGAACTGTTCCAGCTACCATCTCAACTGC TCCTGCGACCCTCTATGGCTCGGAGAAGCCTGTAACATTCCTGCGTGTCCTAGCAACTGCAGTGGGTTGG GCTACTGCGACCCCGCCTCCAAAGCCTGTGTCTGTCCAACAGGTTACAAAGGACGTGACTGTGGGACGCT GGCAGAGGATGGCCTATGGGAGATAAAAGAGGGCGCTATCGGTGAAGGGCGGGGCGCGGCCAGCACCATA CTGATTGGGGATGACCTCTGGGTCGTCGGAGGCTACACGTATAACGAGAAACAAAATCTAACCGTCTCCA GATATAACATTCCAACTGAAACATCACTGGTCATAGATGCCGTGGCAGAATACAGAGTCCTGCCCAGGCC AAGATTTTCACATTCTACTGTCCTGTATGAGGATAAATTCTATATGTTCGGCGGGTCGTTATCCGGGAGC GGGATAACAGCTGAGATGTGGTCCTTTGATCTTGCGTCTCAAACATGGACCAACATGACGGACGGACCCC ACGCCTTAGAGGGCCACAGTGCGCATGTCATTGATGACGTCATGGTCGTCTTCTTTGGCTACAGTCCCAT ATATAGCTACATCAATCTGGTTCAGGAATATAACATCACATCGGGTAGATGGTCGGAGGTGAGGACCAGG GGGGCAGCGGTGGTAGGGGCGTACGGGCATTCCAGTGTCTATCACCCAGAGAGTGGCAAGATCTACATAC ACGGAGGGTTTAAACTGAAGACGGGCAACGATCATATGCTGTCAGACCAAACATACCAGTATGATGTGAA TACAAAATCATGGCTTATATTGAAGGAGAGTCTTCAGCCCCGGTTTTTCCACTCAGCAGTGATTTTAAAC GGGTTGATGCTTGTATTTGGGGGCAATACGCATACAGACAACACACGCCCTAATGGAGCCAAGTGCTATT CCAAAGACTTCTTAGCTTACAACCTTGAATGTGCAAGCTGGGAGCAGATAGAGATGACCACAGGGTTACA CAACGAGGTATCTCTCTTTGCTCATAGAGCATTCATCTATCAGGAATCCATGTGGATATACAGTGGATAC AATGGTCTTCTCTCTACCAGTGCCTTATTATACATCCCAGGGAACTGTTCTGTAATTACTAATTCTTCCG TGTGTGTAGAAGGCCTGCCTGGCCTTTGGTGCGTCTGGGATCTCGTTAGTGAATCCTGCGTGTCAGCAAA CTCCGTCCCAGAGCTAGCAACTAACCACTCAACCTGCCCCATTGAAGAAGATCCACAGTGCGGTATGATC AGCACCTGCCAATCCTGTGTTGAGGCACCAGGCTGTGGATTTTGCAATGGAAACTGCAGTAAGAAGTGTG CAAATGAGATAAGCAGTCAACAGTGTGAACCACCTACATGTTCTGTCTTCTACAACTGCCGCTCCTGCAA TAGTCAGAACTACTGTCAGTGGTCTGGTGGAAAGTGTCAACCTTCAACATCAGGAGGTAATACAGGGTCA TGCAGTGAACCATGCGGTTTATTTGATTCCTGCTCCTCGTGCCTGTCAGACAATAGCAACAGCTGTATGT GGTGTCAGAGTCAGGAAAGATGTGTGGATTCCACCACCTACATGACCTCATTTCCATTCGGTCTGTGCCT GGAGTGGAGGACCAATGTAGAGAAATGCCCAAAAATCTGTACTAACTACCAGACGTGTCAGGAGTGCCAG GGTGACCCTGCCTGTGGTTGGTGTGATGGAGGAAACAGGGACGGCCTTGGGGCATGCATGGAAGGCAGTT ACACCGGACCCGTCAACACCGCCCTCGAACCCGTCGTTGTCGATTACGGCATGTGCCCCGCCCAGAGGTG GTATTTCGTCCAGTGTCCATCATGCCAGTGCAATGGTCACAGTACGTGCCCGAAAAATTCGTCTGAGTGT GGCTTGTGCCAAGACTACACAGAAGGTGAAAAGTGCGATACCTGTCAGCTCGGCTACTACGGTCGGCCGC AGAACGGTGGCGAGTGCAACCCCTGCTCCTGCAACGGTCACTCTGACATATGCCACCAGACCACCGGTCA GTGCTACTGTGATGCTAAGGGAGTGACCGGCAACAACTGCGACAGATGTGAAACAAATGCCAAGTACTAT GGGAATCCTATAAATGATGGCTACTGCTATTACAAACTCTTGATGAATTGGCAATACACTTTCAATCTTT CTGATGAGGAGGATAAAAACCACACCCGCATCGCTATGATGACTGCCCCCAACAGTCCAAACCGAGATAT TGAGTTCATTCTTCGTGTTGACAGTCCAGTCTACCTCAACATTACATACACTGCAAAAGACGTAGAAGGG GAGCAAACAGTGGTCGATGGAATGTACGTTGAATCCACGTACCGCCGGAAGCTGTCCCGTTACGAGTACG ACTTCAGCATGGAAGGCAACACAACTTTCTACTTCTACCTCTCCAACTTTACAACGCCCATGTCATTTGA GGTGGCCCAGTACCACCCTCTGCTTGACTGGGTGACTGTCCTGGTGGCTTTCTTTGTCTGTTTCCTTTCT CTCTTGCTGATATTTCTGGCGGGCCTCAAGATAAAGGATCGCTATGACCGCCATCGTCATGTTGTGCAAC GGGCTGTCGAAATGGCCGTAATGGCTAGTCGACCGTTTGCAGCGGTCAACGTAGAGGTCAGCAAATCGGC ACCACCAGATCTAGTTGCTGAATGCCAGAATTATCAAGTACTAGCAGCCCTAGAGCCTTGTAGCGACAAC AAAGCCGGTATCATGACTGTGTTCCTGCAGCTGCCCATGCCAGATGGAGAAGCGCCCCCTCTTGGCCAAC CCCGACTAGCCCTAGCATCAGCCCTCGTTCAACTCAAACCAAAGAAAGCCGAGATGAAGGAGCAGCGGGA TCGAGAAAGAGACGCACGGGAGAGGGAGAGGGAGAACAGGGCGCGGGAGAGAGAGCAGAGAGAGAGGGAG AGAGAGCAGGAGACGCAGCAGAGACATCAACAGCAGCAACTACCCGTAGCACCCCTAGCCGCAATACAGT CAGACGACGCCCTCTCAGTCAGTGTGTCAGAGGACGCGAGACACATACGGCATCACGCGGATCACGCGTA CGATAACCCTGCCATGGTATAGCATTCCCTTCCATTTTACTCTGATTTCAAAATGTCAGACAGGTTTGTC AACAGCAAATATTTCTTCGTTAGCTTTTCATTTAAAAACGAATCATGAATTCCAAATCCATTTTAATAAA CACAATTATGGCTCATTTTCAGCAACTCTTTGCCTTTTATCAAAAACTTTGCAATTTGGTATATTCAGAT TTGCTCAGAATGGAATTGTATACTTTCATTTTTTAGAAATTTAATTAAACAATCACAATTTTTTTCTTCA GTTGTATCTTCATTGTAAAAAAACATATTTTGATTTTATAATTATTTACATATTGTTGACACGAAAATCT ACATTTCCTGATGCTATGTTCATTTTAAACAGTTTCAAAATAGTAGAGACTTTAATCTTTTGTAGAGGTT CAGTACCCAGGTTCTTTTTAATACATGTACTTAACCGCATGTTGAATTAAAACGACTGACATCTTGAAAT CAGACTTTTTTTAAGAACAGATATATCTTTATTTCTAGTGCCTGATTTATCCTGTATAGTATATGTGACA ATTTTTGTAAATTGAAACTTAAGAATGTATTGCCATTGAAATACTTGAAGATGATTTTATAGATTATGAA TGATAACTACGACAAGTTTGTGTATTGAATATGTGATTTAGCAAATGGTACATGTGATATAAAGAGAGAA TATGAAATGTGTTCTTATTGCGAGAAATCCATGTAAATGGTATGTAGCCAAATGCGATTTTAAAAAAAAT GATGTGATTTATTATGAGAATCAAGAAAGAAATCAGATTATTTTTTAGACTGTTCATTTTAAAATGGTAG TGAATTTTAAGAAGATGTCAAAAACATCTGTATATTACGCAGACAAACAAGTTTCCGGACAGGTTTTTTT TTTATATAAAGATAAGCTCATCTTTAAATTGTCTACACCGATGTTGATCATTTATTGTACACTTTTGAAA TGAAAATTTTGACCAAGATTTTGTCAATATTAAAGCTTTTAACTTTTCTTTTTAATCTTCCTGGCTTCAA ATGACATATTTAACACAACAGAAATGGGTACCAGTTGTGTACAAAATTGCTCTTTCTACTCTTTTATCTA GGATATATGCTAGGACTTCTGAGTCAAATGATATTAGCCAAACTACAACTTTTGGAGATATGTCTAGAAT AGGTAGTCACTCCATAGCACGAAGAAGAAGAAGCTGGTATTTACAGAGCTGTGTAATATATTAAATAGAG AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGGGGGGGTCAAGAATAAGTAATGGAAATT GGTAAGGGACAAAATAAATTTAGGGGAAAATATAAAATGGGAGTGGATGATCAAAGAGAGTGTGAGATAT GCATCAGATGGAGTTTTAGATACCAAATGTTAAAGTTTTCTCATTTGGAGGTCTCTTTATATTATTCTTG AAATTTTGAATAAATTCTCAAATTTTTTTACCATTGAACACATTTTTTTGAATTGATATGAACAGTGAAA AGGCGAAAGAAACATGGTTAAATGCTTGTGTCATGAATTTGTATTTATGATACTCGTTTGGAGGTAGGTG GTATTAATGTAAAGGGGAACGTAGACTCCAAGAGACAAACTGATTGTAGTCTATGATACTGAATGTAATA TCTATATGAAGAGAACATGCATCATTCCAATTCTTCGACCGAACTGGGCCCCCGTCAGACAAAGAGTTAT GATTGGTCAGAATCGATTGCAAAGTCCTCCAATAGACCACCTTGGAGATACCACATGACTGTACAAATGA CCCCCAAATATCCATAGATCTTTTTTAACATGGACGCGTCTCACTTTGTGCATTTTTAGGAAGAATATTC ACTGCCAAAGTGATGGAGGTGCTTCATGAATACTTTTGATCGCCCTCCTGAAAAGAATACTTCCACCTGT GTATCAAAAAATGTACCGTCGGTGCATATATGAATATTGATTACATAATGTTTATGAACATTTATCCAGC ATGCGTCTCAATGGATGTTACAGTCTTATAACTGTTTTGTAAAACAGTTTTATTTACAAATGACCTTCAT CTGCCAATGCGCAGATTGTATCTCTGCAGTGGCTTATTATTGGACTGCGAAAGATCAAAGACTTTTAAAA TCAATATGGGTCAATTGCAACTCTTAATAAGACGAGGTGGAGACCTACTGTGAATATGCAGAAGTGCAAT ATTGTTTTTCATACTAGTATAACAGAAAAGCAAGCATTATTCTTTTAATATTCATGAAGAATCACAGTCG AACCAATAACCTGGGGGCCAAAGTGTACTGTGTGCGTGGAATTTAGGCCATGATATTTACAACAATAATA AAGTATAGAGTGATGATAATCGCTATGGGATGATAGAATAATGTGATATATACCACTCTTTCCAAATCAT GTGGTGTTTATTTTCTACTGCTATCATGGTCATGTTGTGTGTTTTAATGAAAAATGCTGCAGATGAGTGT TAAATACTGTCTATTTGTCAGAAATTTATGAGAAATTGTAAAGGTGGAAATTGAAATGGTATTGTTGTGT CAATGTAATGGTGTTTACATGCATGTGTAATGTAAAATCTGTTGGGTAAAGACGCATGGTTGAGATTCCA GTGATAAATATTAAATGAAATGCAAAGATGGAATGTGCTTTTAATAAGGCATGGATAAACATAGGACCAT GATAAAGTTTACTTTGATATCAAATCAAATGCTAGGGTTAGTCTAGGATGCAAAATGTCCTGCTATTAAT TTAAATGCTAGGTGTAGCTAGTCTGCCATTTGAAAATTCCTGCTACACATTCTCCTTTCTTACACAGCAA CTCTCCAAGTTTTATCTATCAGTACTTTCAACAATCAATGAGGGAAAAGGACAAAAAAATCTTTCAAATT TCTGTGTATACTTTAAATGTCTTGGTATTATACTGATCTGCTGTGGGTTGGTTTTGCTACAATAATGCAT ATTGTTACAATAATGCATTTTGTTTCTACAAGATACATGTTCTGTTAATTTTACACGCTTGGCGTTTATC ATGTTTAACAATGGCATCTACATGTTTATTTTTGGTAATTCTGTATTTTTAAAAAGGTTATTTTTAAAGC TTTCCCAAGCCTACTCACTTTATATGATATATGAAAGATTTGCTTTGGGCAATCATGGAATAACACCAGA GTGTCGTATTACCCAATTTGGAATCTTTTTTTTTTTTTGGGGGGGGGGAGGGGGAGGATTTGTAAAGGAA GTTTGGCATATATCATATGTATTTGTTCAAAACATTATACTCTAAATTGCGATTTACTTCAGCCAAAAAA GAAGGAAAATCACTCAATACAACCAATTATATTTTATCTTTGTGGTATCATTATACTGTATAATGACACC AAATAAAA
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???blast.numalign.100???
???blast.wordsize???
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???blast.matrix???
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???blast.matrix.blosum80???
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???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds