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Echinobase
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Echinoderm mRNA
Echinoderm protein
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S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
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>JT100602.1 TSA: Strongylocentrotus purpuratus WHL22.530976.0 mRNA sequence AGACTTTCCTTGGTTCTGAGTTTTCCAAACACATTGAGCAATGGCAGCAGCTAGGAGCCAAAGTGCAAGA GCGTCCTCTAGTGGCGATGCAAGGATCAGTCTGGATTTAGGGGATGAGTCAAGCAGCGATATCTCCTTGT CGTGCCCTGATCTGAAAGCTTTGAGGAAGGAACGTGAAGACAGGACAAGAGCCACTATGCAGGCCGTGGA TCCAGCCCTTACGAGGACATTACTACCAGAGAATATTGACTCCAGTGCAGAGGATAAAGCAGCAACCAGA ATCCAGTCAAGCTACAGAGGACATCTAGGACGTAAACTATATCTACAACTCCTACTTCAGCAATTCAACA GGGATGAAGAGCAGAGGAGGAATCACATGTTAAAGCAGGTGGAAGAAGGAGAACTATTACTTGAAAATCA CAGATTGGAGGTAGAATTTGAAGACAACATATGCGTGAGGAGAAATCGGCTACAAAGATATGAATCGAGG ATAATAACAATCCAACGTGCATGGAGGAACTATAAACGGAGGAAAGAACACATCACAAGGAAGGACACAT TACAAGAATCACTCTCTGAAAGTGATGAAGACGATGATGTAGACGACAATGATGATGACGATAATGATTT ATCAAACGACGTCAACGGTAACCATCAACTACCCAGTGAGAGTGATATAAATTCTTCACAAACAGACCTA CAGAGGGAGACAAACCGAAGCGTGGAGGGAGAGAAAGATATTCAGCGTCAGGATTCAACCTCTTCAGGTG GTGAGAGCCAGTCAGAACCTGTTGCCATGACAGCAGTGGGAGGATCCAAGAAGGGGATCGCTATGCTGCA CGACCTGGGGAGCAGCGTTGAGCTGGACGACAAAGCCTGCTATGAAACCTCTCCAGAAACACCAAGCCGA AGACGCCAGGGTATAAACCGCTTGAGTCTGGCGGAGGAGTTGGCAGCCATGGAAGAAAGAATCATGGAAG ACTCGCTTGATTTTGACTCGCAGAACGAGGAGAGCGATTATTATGCAAGCTCAAGTTGTGTGACCTCACC CGAAGGGGAGGGCGGGAACGAACACATCGGCAAGAGACCCGTGGTGTCGTTGTCCAGGAATATAGGTGGG AAAGAAACTCCCAGCCCTAGTGAAATGAGGACTACAGAGGGCTCCCCTCACATTGAGTCGTTTGATCAGA ATAAAAACACAAATGATTTCAACGCTAACGCTTCTTCCTGCCTGATGGAGGAGTCTGAACTCACCGAGGC TCTGGCCAAACTTAAGACCAAGCTAGGCACGGCTTACATGGACAACCAGACTCCCTCCAGTACTCTACAC CAGGTTGATGGCAATGAAAGGAGCATTAATAGAGTAGGGGAAACAACCCCCAATGAAACTAATCGAGTGA CACATTCAACGACTTCCTCCATACTGTGCAGCGCCACGACGCTGACTCATAGTCAGTGCGACCCTGTGCA CAGTGCACCAGCAACAACAAGCGCAACAACCACAACAACATGCAATCGGGGCACAAACACGCAGACTACG GTCACGAACACCACCACCACCGCACGTTGTACAAACTCTGACCCCTCGGTCGGGAAGAGGTCGATTAGGG AGGGTGGGGCGCCCCCTAGAGGTGGGGTATGTAAGAGTTCAGCTGGTCTTGATACATCCTTGCCTGTGTT GGATTGGGACTCGTTGGAGAAACACCTTGCAAAAATGGAAAAGGAAGAAGAGCAACAACAAAGTGCTAAA CAGTCACAGAAGAATTCGCGGCAGGAGATACTCCGCAAGCTAGCCATGGGCGCCGACGAGGAGGCAGAGG GCGACATTTACGGCAAGGGACGGGACAAGCTCTCAGCTCGGCTCCAGGGCGGCATGAACCTCCAGATCTG CTTCGTCAACGAGAATCTTGACTCGGATGACGATGAAGGGTCAAAGGTTGTTGCCTTGCCATCTTCAAGC ACGATTCCTGGACCTATTGTAGGCAATAGAGACAGTCGATACCTGTTTAGCAGAGAGTGTAGCGCAAGTA GTACCAGCAGTTCAGCTTCTCCAAAGGCTCCATCAGTAACATTTGAAGACATTGAAGACTTCGAATCGAA GAAAGCACACCTGCAGGAAGAGGCCAGGATTGCCTGGTCCAAGGCGGAACCACTGGCTAAACTACAGATG GAACTGGAGAGGCAACAGAGAAAGTCCTCGCCATCATCGGCCCTGTGTCATTTATCAGGTTTAGGTGATC TACCCATCAGTCTGCTTGGCAAACGGTTCCAATATAAAACCTTGAGCAGAATGAATGTCAGCAAACTCCA AATCATCCTCAATGATCTCCACTCACAAATTGAAAGGCTGAATGAGGATCTGGTGCAGTGTCTGCTGGCA CGGGACTCCCATAAGAGGGAACAGGAGTCGAGACTCATAGACATAGAGGATCTGAACAGACTTACAGCAG AACAACAACAGCACACTCATCAGCAAGGAGCCTCTCGGGGAAGACGGCCGTAAACAGCGCCACCAGTACG AGGCCCTCCTCCGTCTCCTAGGCAACACGCTGCCCGCATCAGGCAAGAAGTGCTTCTGCGGGGTTAGTCG TAGTTCCTCCGTGGTCTCCAACCGATCCGCTTCCAGTCCCGAACCGGACTCCATCGGGGGTATCCGACCG GCGCCCCTCAGTCCAATCAGCCCAGGGAGCTGCCGGTCCGAGTCGGCCGTTAACAGTCTCACGGAGAGCC ACGCCTCCAGCCCCGAAATGACGTGGGTTCGACAAGCCATCGTACGCTACTGGCATAATTGACCCCACAT CTATCTCTCCCTCTTACTAACCCACCCCTTCTTACACCCCTCCACCACTTATCAGCTGCACCCCTATGGC TCCTTAAGTTCCAGCATGTGTGTTTAAGTTTCATAAGACATTAGTTATCATACAAAATCTTCTCTTTCTT TTACATGTAAGTGAATGGTAAGTGGGGATCAAGCAGTATCTGCAACAAAGTTCTTTGAATCTATCTGTGT GTTAGAAGATATAGCAATGTGATGCATATTACGCTCACGTAATTAAAAACCTGCCACGATTTACCGAATT CTATAGTATGTGAAGTGGCCTTTGAAATCTGACAGACACTCTTTAGTCCACAAAAACAGACTCTAATATC ACCCTTTGAAATAATCATGTTTTGTGGCCCAACCCAAATACTTGTAGGTGTATGCTTCTTATAGAAGACA ACAAATTTGAAGGGAGTAGAAACTAAATTCAATACTTTCTGTTTCTTACAGTATAAAAAATGTTTGAATA CAGTGCCAAGAGCCCCAATTTTTTCATGTAGCAAACTATATTGAAAAAAGAAGAAAAAAATTAGAGATGA TTAGAAATGCTTACTTTCAAAGAGTCAAATGTATACAAAATGTGTGTATTTTTTAAAAATTAAACAATTG TGTAGGAATGCTAATATTTTCAATTTTTTTTTTTTTTCAATCAACTTCTTTTCTGACCAAAAAGATATGA AATTATTTGCTCTCTTGTGAGAATTGTTCTAATCCACCAGTATTAGGAGGTTCCTGATGTTTTTGAATCA TTTTTTTGAAAATCAGCTTGAATTAAATTGCCAATCACACATTTGAGGGAGAGATACGTGTACATGTTTT AAGTTTAACATAATTATTACTTCTTTACTTCATGTCCATGTCAATTTGATCAGACAACATAATCACTAGC TTTTGAAAATACAATCTCTATATTCTTAAGAAATGCATATATTTGTAAAAAAGAAAAAAAAAAGTATTTA TTACATAATCTTGTATAGGTGAGGATACAAATGTGCACCATCTTCATCGTGACTTTGATAAAATGGTATT GGTTTTTATCACTAAGAAACGATTCAATATTTAAAAAGGAATGAAATGCTGCATGAGAATCTGTCTATTA TCTAGTTATTCACTTCTCAATGGGTCAATGTTTGCTTGTTAGAAAGTAGACTGAACTTTGGGATTCAACT CTGCTTTAGAAAACAAAATGTTGCCAATACACTTCATGGATAGGTGTCACAGATCCTGGGCAACATAAAA CCACAACAAAATGATACGCCACCAAAGACAAAGATTACCTGTACACACACATATTATTTACTGCAGCAAC TGTTTCAAATAATATGGAACCAGATAAAAATGGATCAGAGAATTGCACTTCAGTTTGTATATACACTGTT TCAATTGATACAAAATATGTAGTAAAGTGATCTGATGTACATGTATTTCATTTTGTGTGTGTATTTTGAA ATTTTATTTTTGTAGAAAAGCTAAAAATATCGTTTAAAAATGTGAATAACCCATGGTGAAAGAGCAATAA GTAGAAAATGATCTCAAATTCATGAGCCATATTTATCCTTTCTTTATTTACGTACAAAACGTGTTTTATA GTCGTAGCAACAAGTCCATGAAAAAAAATACTTTTTCTTTACCAGCTTCAGTGGATTTTCTCATTGAAAC ATGTGTGTTAAAGGAAACCTTTTTATAAGGACCACCTCCCTATGAACCATTTTGGGGTCTATCTGTCTGT CTGGCTTTTCTGTTTTTTTCTTGAAAATGCTCCAAAGCTGTTGAATACTTTTTGTTAATGCTTGAGGTCA CTCAGCTAAGCTTTTCATAACATTTTTTATCTTTCAAAAAGAAAAAATATATATGGCTCATTTTAGATGT GATCATTTTTGTACAATTTGATTTGCTTTCTAGTTTGCTTAATACTGCTTTCATTTTTATAATGCAAAAG ATTGAAATATTTTTGTTATCATTTATGTAATAATATCCCATGCTTTCATTCATGCCATTTGTATTCATTT AATCATCATATCCTTTCAATTGATCTTGTAACTGACCATAATTGATATCTTCTTTTTGCATTGCTCATAT CAGTGTTAACATATGTTAATTTCTATTATTTGTTATCAAGTGTGTGCTAAGAGAGAATAGAATTATGCAG AGACGTCAATCATTAGAAATCAAAATCAGGCTAGATTTGATTTCATTCTATGAATGCATAATTTGATATA TATGACGGGGCATGGGATATCATTAATAGCTCATTTGGTCAGAAGATAGTTATGATACTCTACTGTTCCA CTTATCTGAAATTATTATTTTTTAAATGAAACTACTAAAATCTAAGAATTGGATGTAGATATCTTGTGAA ATTCTGAACATAAAATTGACAAATCTTTGACACCTAAATCTTTGATTATTCTTATACACACTTCAGTTAA TTGCTCAATTGAGTGAAATCCTTTTCTCTCTGGTATATATACATCTGATTTGAGAAAAAGTTTAATTTCG CTAGATCGTTAGTTGCAAATCTGATTGTTTTTTTATAATTTCTGATGCAGTTGTCTTCCATGCTGAAACT ATTTTTGTTGATTCCCAGTTTGCCAATAAATATTATCTCGCTATATGTCGACTACACTGAGAGGATTCTT CTTCTTGTACATTTACAATGTAAAAAGTTTTATAGTAAGTTTAATCCCTGTGCATACATGTATGTACCAG TATATTGCAATCCTATTTTGTAAACTAAGTAGGAAAGTGCCATGTACTTGTATTTTGACAGACTTCATGT AGTCTGTAAGCACCGACTTGTTGTCGACAATTACATTTTTGATTAATGTTGCATTGAACCAAGTCTGATT TAACCTTGTATTATGGTTGCGAGTCATGAACTACAGCACAGGGGTTATGTAGATAGTCTACAGACAAGGA TTCGCAGACCCTGATTTGGGTTATACAATGTTTTGGCAAGATTTGAGTATGTTTGATGCAGACTAGGTAT ATAGATTTCTTGCTTTGACAGTTTGTATATGCATCGTGCAATCAACTACATGTATCTGGGAGATATATCG TTGTTGTCATAAATTTGAATGGTATTATTTTTATTTTGTTTGCCAGTTATACTATATGTTTGAATTTAGT GAATTAAAAAAAAAAAAAAAACACAATTGGGTAAAGAACATATGAATGGAATTATTAGAATATCAAGAAA TAAAATATAATCGTTTCAAAAACCAAGTTCTGTGTTTGAACTTTTGGGGATCTTTGCTCAAATAGAACCA GTTACTCTTTAAAAAACAAACATTGTTCAATAAATATGTACATGCTGAGATGTGTGCTGAAAACATGGAG TGCTATATGTGGGTTGCTAGACTAACGCTTAGGTAATGAATTTCAAAAAGACATAGGGGCATTGTGTGTA CGTGTTTTATAGCATTATGATCGTTAATTTGTTTTCTTTATCCTTAATAAATTCTGATCGCAAAATTATA GTGTATCATTACCAACATAATTAGAAGAAATTTGTATAATTTTATTATATCTTGGGATTTGAGATAGATT TTTGAATTCAGTCTGGTTTTATTATGCTGTGCATTAATATGTGTTACAAGCTTACTTAAATGTTCTTAAA TTGGATTGTTTGCTTCATTTTCGGGAATATTTACAATTACACACAAGAGCATGTGGACGGACAGAGTTTA TGGAACGTACATACAGTGCAAGAGAGAGCGATGGGTAGATGAAAATTAAATAATCTGTATTCATGTAGCT TCCTGAGAAGCAGAGGAACGTTGCAAGATTTGCATAAGATAACTTTACGCCTCAGCTATCCATAATGTGT TTCAAAGACGTGCATTTGAAATTCTCACAAT
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???blast.eval???
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds