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Echinobase
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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
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>JT106601.1 TSA: Strongylocentrotus purpuratus WHL22.530976.1 mRNA sequence CTGGTCGACACTCCTACCCATGATAGCGGCTTTACGGGGATCCAGACAACAAGTGTCCGCTTATATTGGA AACAAATTGGATCATAACAAAACACTCGCAGCAGGGCTATTTTCTTCCTGGTCTCTTAAGAGGAGATAGG CCGTGGATCCAGCCCTTACGAGGACATTACTACCAGAGAATATTGACTCCAGTGCAGAGGATAAAGCAGC AACCAGAATCCAGTCAAGCTACAGAGGACATCTAGGACGTAAACTATATCTACAACTCCTACTTCAGCAA TTCAACAGGGATGAAGAGCAGAGGAGGAATCACATGTTAAAGCAGGTGGAAGAAGGAGAACTATTACTTG AAAATCACAGATTGGAGGTAGAATTTGAAGACAACATATGCGTGAGGAGAAATCGGCTACAAAGATATGA ATCGAGGATAATAACAATCCAACGTGCATGGAGGAACTATAAACGGAGGAAAGAACACATCACAAGGAAG GACACATTACAAGAATCACTCTCTGAAAGTGATGAAGACGATGATGTAGACGACAATGATGATGACGATA ATGATTTATCAAACGACGTCAACGGTAACCATCAACTACCCAGTGAGAGTGATATAAATTCTTCACAAAC AGACCTACAGAGGGAGACAAACCGAAGCGTGGAGGGAGAGAAAGATATTCAGCGTCAGGATTCAACCTCT TCAGGTGGTGAGAGCCAGTCAGAACCTGTTGCCATGACAGCAGTGGGAGGATCCAAGAAGGGGATCGCTA TGCTGCACGACCTGGGGAGCAGCGTTGAGCTGGACGACAAAGCCTGCTATGAAACCTCTCCAGAAACACC AAGCCGAAGACGCCAGGGTATAAACCGCTTGAGTCTGGCGGAGGAGTTGGCAGCCATGGAAGAAAGAATC ATGGAAGACTCGCTTGATTTTGACTCGCAGAACGAGGAGAGCGATTATTATGCAAGCTCAAGTTGTGTGA CCTCACCCGAAGGGGAGGGCGGGAACGAACACATCGGCAAGAGACCCGTGGTGTCGTTGTCCAGGAATAT AGGTGGGAAAGAAACTCCCAGCCCTAGTGAAATGAGGACTACAGAGGGCTCCCCTCACATTGAGTCGTTT GATCAGAATAAAAACACAAATGATTTCAACGCTAACGCTTCTTCCTGCCTGATGGAGGAGTCTGAACTCA CCGAGGCTCTGGCCAAACTTAAGACCAAGCTAGGCACGGCTTACATGGACAACCAGACTCCCTCCAGTAC TCTACACCAGGTTGATGGCAATGAAAGGAGCATTAATAGAGTAGGGGAAACAACCCCCAATGAAACTAAT CGAGTGACACATTCAACGACTTCCTCCATACTGTGCAGCGCCACGACGCTGACTCATAGTCAGTGCGACC CTGTGCACAGTGCACCAGCAACAACAAGCGCAACAACCACAACAACATGCAATCGGGGCACAAACACGCA GACTACGGTCACGAACACCACCACCACCGCACGTTGTACAAACTCTGACCCCTCGGTCGGGAAGAGGTCG ATTAGGGAGGGTGGGGCGCCCCCTAGAGGTGGGGTATGTAAGAGTTCAGCTGGTCTTGATACATCCTTGC CTGTGTTGGATTGGGACTCGTTGGAGAAACACCTTGCAAAAATGGAAAAGGAAGAAGAGCAACAACAAAG TGCTAAACAGTCACAGAAGAATTCGCGGCAGGAGATACTCCGCAAGCTAGCCATGGGCGCCGACGAGGAG GCAGAGGGCGACATTTACGGCAAGGGACGGGACAAGCTCTCAGCTCGGCTCCAGGGCGGCATGAACCTCC AGATCTGCTTCGTCAACGAGAATCTTGACTCGGATGACGATGAAGGGTCAAAGGTTGTTGCCTTGCCATC TTCAAGCACGATTCCTGGACCTATTGTAGGCAATAGAGACAGTCGATACCTGTTTAGCAGAGAGTGTAGC GCAAGTAGTACCAGCAGTTCAGCTTCTCCAAAGGCTCCATCAGTAACATTTGAAGACATTGAAGACTTCG AATCGAAGAAAGCACACCTGCAGGAAGAGGCCAGGATTGCCTGGTCCAAGGCGGAACCACTGGCTAAACT ACAGATGGAACTGGAGAGGCAACAGAGAAAGTCCTCGCCATCATCGGCCCTGTGTCATTTATCAGGTTTA GGTGATCTACCCATCAGTCTGCTTGGCAAACGGTTCCAATATAAAACCTTGAGCAGAATGAATGTCAGCA AACTCCAAATCATCCTCAATGATCTCCACTCACAAATTGAAAGGCTGAATGAGGATCTGGTGCAGTGTCT GCTGGCACGGGACTCCCATAAGAGGGAACAGGAGTCGAGACTCATAGACATAGAGGATCTGAACAGACTT ACAGCAGAACAACAACAGCACACTCATCAGCAAGGAGCCTCTCGGGGAAGACGGCCGTAAACAGCGCCAC CAGTACGAGGCCCTCCTCCGTCTCCTAGGCAACACGCTGCCCGCATCAGGCAAGAAGTGCTTCTGCGGGG TTAGTCGTAGTTCCTCCGTGGTCTCCAACCGATCCGCTTCCAGTCCCGAACCGGACTCCATCGGGGGTAT CCGACCGGCGCCCCTCAGTCCAATCAGCCCAGGGAGCTGCCGGTCCGAGTCGGCCGTTAACAGTCTCACG GAGAGCCACGCCTCCAGCCCCGAAATGACGTGGGTTCGACAAGCCATCGTACGCTACTGGCATAATTGAC CCCACATCTATCTCTCCCTCTTACTAACCCACCCCTTCTTACACCCCTCCACCACTTATCAGCTGCACCC CTATGGCTCCTTAAGTTCCAGCATGTGTGTTTAAGTTTCATAAGACATTAGTTATCATACAAAATCTTCT CTTTCTTTTACATGTAAGTGAATGGTAAGTGGGGATCAAGCAGTATCTGCAACAAAGTTCTTTGAATCTA TCTGTGTGTTAGAAGATATAGCAATGTGATGCATATTACGCTCACGTAATTAAAAACCTGCCACGATTTA CCGAATTCTATAGTATGTGAAGTGGCCTTTGAAATCTGACAGACACTCTTTAGTCCACAAAAACAGACTC TAATATCACCCTTTGAAATAATCATGTTTTGTGGCCCAACCCAAATACTTGTAGGTGTATGCTTCTTATA GAAGACAACAAATTTGAAGGGAGTAGAAACTAAATTCAATACTTTCTGTTTCTTACAGTATAAAAAATGT TTGAATACAGTGCCAAGAGCCCCAATTTTTTCATGTAGCAAACTATATTGAAAAAAGAAGAAAAAAATTA GAGATGATTAGAAATGCTTACTTTCAAAGAGTCAAATGTATACAAAATGTGTGTATTTTTTAAAAATTAA ACAATTGTGTAGGAATGCTAATATTTTCAATTTTTTTTTTTTTTCAATCAACTTCTTTTCTGACCAAAAA GATATGAAATTATTTGCTCTCTTGTGAGAATTGTTCTAATCCACCAGTATTAGGAGGTTCCTGATGTTTT TGAATCATTTTTTTGAAAATCAGCTTGAATTAAATTGCCAATCACACATTTGAGGGAGAGATACGTGTAC ATGTTTTAAGTTTAACATAATTATTACTTCTTTACTTCATGTCCATGTCAATTTGATCAGACAACATAAT CACTAGCTTTTGAAAATACAATCTCTATATTCTTAAGAAATGCATATATTTGTAAAAAAGAAAAAAAAAA GTATTTATTACATAATCTTGTATAGGTGAGGATACAAATGTGCACCATCTTCATCGTGACTTTGATAAAA TGGTATTGGTTTTTATCACTAAGAAACGATTCAATATTTAAAAAGGAATGAAATGCTGCATGAGAATCTG TCTATTATCTAGTTATTCACTTCTCAATGGGTCAATGTTTGCTTGTTAGAAAGTAGACTGAACTTTGGGA TTCAACTCTGCTTTAGAAAACAAAATGTTGCCAATACACTTCATGGATAGGTGTCACAGATCCTGGGCAA CATAAAACCACAACAAAATGATACGCCACCAAAGACAAAGATTACCTGTACACACACATATTATTTACTG CAGCAACTGTTTCAAATAATATGGAACCAGATAAAAATGGATCAGAGAATTGCACTTCAGTTTGTATATA CACTGTTTCAATTGATACAAAATATGTAGTAAAGTGATCTGATGTACATGTATTTCATTTTGTGTGTGTA TTTTGAAATTTTATTTTTGTAGAAAAGCTAAAAATATCGTTTAAAAATGTGAATAACCCATGGTGAAAGA GCAATAAGTAGAAAATGATCTCAAATTCATGAGCCATATTTATCCTTTCTTTATTTACGTACAAAACGTG TTTTATAGTCGTAGCAACAAGTCCATGAAAAAAAATACTTTTTCTTTACCAGCTTCAGTGGATTTTCTCA TTGAAACATGTGTGTTAAAGGAAACCTTTTTATAAGGACCACCTCCCTATGAACCATTTTGGGGTCTATC TGTCTGTCTGGCTTTTCTGTTTTTTTCTTGAAAATGCTCCAAAGCTGTTGAATACTTTTTGTTAATGCTT GAGGTCACTCAGCTAAGCTTTTCATAACATTTTTTATCTTTCAAAAAGAAAAAATATATATGGCTCATTT TAGATGTGATCATTTTTGTACAATTTGATTTGCTTTCTAGTTTGCTTAATACTGCTTTCATTTTTATAAT GCAAAAGATTGAAATATTTTTGTTATCATTTATGTAATAATATCCCATGCTTTCATTCATGCCATTTGTA TTCATTTAATCATCATATCCTTTCAATTGATCTTGTAACTGACCATAATTGATATCTTCTTTTTGCATTG CTCATATCAGTGTTAACATATGTTAATTTCTATTATTTGTTATCAAGTGTGTGCTAAGAGAGAATAGAAT TATGCAGAGACGTCAATCATTAGAAATCAAAATCAGGCTAGATTTGATTTCATTCTATGAATGCATAATT TGATATATATGACGGGGCATGGGATATCATTAATAGCTCATTTGGTCAGAAGATAGTTATGATACTCTAC TGTTCCACTTATCTGAAATTATTATTTTTTAAATGAAACTACTAAAATCTAAGAATTGGATGTAGATATC TTGTGAAATTCTGAACATAAAATTGACAAATCTTTGACACCTAAATCTTTGATTATTCTTATACACACTT CAGTTAATTGCTCAATTGAGTGAAATCCTTTTCTCTCTGGTATATATACATCTGATTTGAGAAAAAGTTT AATTTCGCTAGATCGTTAGTTGCAAATCTGATTGTTTTTTTATAATTTCTGATGCAGTTGTCTTCCATGC TGAAACTATTTTTGTTGATTCCCAGTTTGCCAATAAATATTATCTCGCTATATGTCGACTACACTGAGAG GATTCTTCTTCTTGTACATTTACAATGTAAAAAGTTTTATAGTAAGTTTAATCCCTGTGCATACATGTAT GTACCAGTATATTGCAATCCTATTTTGTAAACTAAGTAGGAAAGTGCCATGTACTTGTATTTTGACAGAC TTCATGTAGTCTGTAAGCACCGACTTGTTGTCGACAATTACATTTTTGATTAATGTTGCATTGAACCAAG TCTGATTTAACCTTGTATTATGGTTGCGAGTCATGAACTACAGCACAGGGGTTATGTAGATAGTCTACAG ACAAGGATTCGCAGACCCTGATTTGGGTTATACAATGTTTTGGCAAGATTTGAGTATGTTTGATGCAGAC TAGGTATATAGATTTCTTGCTTTGACAGTTTGTATATGCATCGTGCAATCAACTACATGTATCTGGGAGA TATATCGTTGTTGTCATAAATTTGAATGGTATTATTTTTATTTTGTTTGCCAGTTATACTATATGTTTGA ATTTAGTGAATTAAAAAAAAAAAAAAAACACAATTGGGTAAAGAACATATGAATGGAATTATTAGAATAT CAAGAAATAAAATATAATCGTTTCAAAAACCAAGTTCTGTGTTTGAACTTTTGGGGATCTTTGCTCAAAT AGAACCAGTTACTCTTTAAAAAACAAACATTGTTCAATAAATATGTACATGCTGAGATGTGTGCTGAAAA CATGGAGTGCTATATGTGGGTTGCTAGACTAACGCTTAGGTAATGAATTTCAAAAAGACATAGGGGCATT GTGTGTACGTGTTTTATAGCATTATGATCGTTAATTTGTTTTCTTTATCCTTAATAAATTCTGATCGCAA AATTATAGTGTATCATTACCAACATAATTAGAAGAAATTTGTATAATTTTATTATATCTTGGGATTTGAG ATAGATTTTTGAATTCAGTCTGGTTTTATTATGCTGTGCATTAATATGTGTTACAAGCTTACTTAAATGT TCTTAAATTGGATTGTTTGCTTCATTTTCGGGAATATTTACAATTACACACAAGAGCATGTGGACGGACA GAGTTTATGGAACGTACATACAGTGCAAGAGAGAGCGATGGGTAGATGAAAATTAAATAATCTGTATTCA TGTAGCTTCCTGAGAAGCAGAGGAACGTTGCAAGATTTGCATAAGATAACTTTACGCCTCAGCTATCCAT AATGTGTTTCAAAGACGTGCATTTGAAATTCTCACAAT
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
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???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds