Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_003723938.3 PREDICTED: Strongylocentrotus purpuratus protein fuzzy homolog (LOC100890791), mRNA AACTATCCTCTAGGCTCTACCAATTTTGTGAACATTAAATCGAGATCGAGCTGAGTTTTGCATCAAGTTT ACAGTTTAATCATGGCAGTACACTTAGTGTGCCTTACTAACGAGGGAGGTGTTCCTCTATTTACACGAAC GAAGGGAGATGTAAAATCTCTTGCTTTCGCCGAGCAGGGCATGCTGTACGGTGTTCAGATGTTTGCCCAA AATCACGGGGTCAAGCTAGAGAGTACGACCACTGAAGAGGCTAAGGTCATCTGGCAGGTGTTTCATGATA GTGTGACCTTGGTGTTGGTGACAAGCAATGATGGGAGTTGCGATATACATTACAAGACGCTCATCAACCA CATATTTCATGCAATGGTAATGTTCATAGGCCTGGAGACCCTAGTGAGCATTAGGACTGTAGAAAAACTT CGCAGGGAAATCAAGGTCTGTTACCCGGTTATTGATACGCTTCTCCAAGATACTGACCTGTATGGTGCTC TCTCATCATCAGTAGATGTCCTTGTCTCAGCAGAAAACACAACTTTACAGGAACCTCTTGAGGCATTTGT CACCAGCGCAGAAAGTACGTTTGGTTGTCTCCATGCTGACGGCAAGCTAGTGGTCGCTACGTCCAATTGG TGGGCACTCAGCGGTCAAGAGATGATGCTGGTGGCCAAATTCATCCAGTCCCTACCCATCGGAACGTCCA GCGATGTGCCCATCTATCTGCCACATGCAAGTCCAAAGGACCCCCACAGATTATTGAGCATCCATCTTCA ACCCGGTGTGGTTGTGAGCGTCCTGTGCTATGCTAACCCTACCCTAGCCGAGGCAGAGGAACAACTCATC GAGCCGGCCTGGAGGTTGCATCACGAGGCGCTCCGAGCAATCCAAAGGGCGCCCTCGTCCAACATCCCAA GGACAATCCCATTGGATGCAGGCATATTGGGGTATGTTTTATTGAACACCGACCAGCACAAGTGTCTGTC GTCAGTCCGCCTTCCTCTGATTGCAGGGGGCGCGGCCGAGCTGAAGCCCCTCCCACCCTACGCCCGGAGA GAGATTCTCACGGCTTTCTACCGCACCGTGGTGGGAGGACTCTTCCCCCCTTCCCTCAGCCCAGAGAGAC AAGATTCATCGGGGGAAGCCTACAAGTGCCTGCCACACAGCGCAGAAGAGACTTACATGTGTGGTGACGA CTTTAAGACCTATGCCCTCAACTCTGGAGGCTTTCAGTTTTTTGTTCTCTTCTCATCGGCAGTCCCACAG TATGCGATGAGATCTGTGACCAAAAATCTTCTAGGAACGCTGTCCAAAGAGAAGATCTTTGTCGATCGAA GGACAAAGTCATCTTGATAACTGGATTGAGATGGTCTGGAATGGACAGACTACAAGAAGAAGTCATTGAC CGTGGCTCGTGGTAGCATGACAAGGTCATCTTGCCATCTTGGATGTAGGATAGTCTCTACATGTATGAAA GAGACTGCATTCATCGCCTGCTCCTCATGATGCCAAACTTAGCATCCATCGAACAAGAAGAAGAAGCGCT GCAATGATTGCTCGACAAAGACATCTCAATAGCTTGGATCTACGATGGGATCTGTTGGAGTAGCTGCAAT AAGAGATCCTTGCTTGTGGCTTATGATGCATGATAATATCAGTATCACAAAAAAGGAGCGCTACATCAGT GATTGCATGAGAAACTTATTTGATACCTCGGATGTAGTTTGGAGCTTGTTCCCACTTTCTGTAGCCATTT CCGTAGCCATCGCATATAGCTATCGATGCTCATAAAACCATCAATATCACAATGAGCACTGCAATGATGG CAGAACTAAAGTCCTCTTGATATCTTGGATGTAGGAAGGTCTTGATCTGAGAAGTGCAATATAAGGTCGT CAACTATAGCTTCTGGTGTCAATGGTGCTACCTGTCTCACCAAGAAGGAGCCATTTAATTATGATTGGAC AAAGACACTTTTAATCTTGAATGTAGGAGGGTCTTGAATGAGACACTGTACTACAAGGCCATTACCTATA GCTCCTGGTGTCAATGGTGCTACCTGTCTTACCAAGAAGGAGCCATTTAATGATGACATGACAAAGACCC CTACAAATCTTGGGTGTAGGATGGTCTGAATTAGCTAGACTGCAAGAAGTGGCCCTCACTTACAGCTCAA GTTGCCATAGATACCATCTCTTTCACAAGAATTTATGCCACAGTCATCGTATAGCAAAGTCACCTTGGTA TCTGGGATATATAGATGATTTAGAATGCTTCCATTTAAGTTACGTAGTCATTCCCTAAAGCTCAACACCT TGGCATTGAAACCCTCTAGGTGTTTGGGTTTACAGGGTTCTGGGAGGAGGGGGCAGAGTGTCGGTAACAC TGATGACGCCCAATAAAAAATTTGGCAGCTGTGGTGAAACTGAGAATTGTTTCTGCTCCTTCAGACGGGG CTGTGACAAACACTGGTGTGAAGACAGAATTCAACTTGTATCGAATGGTACCATGAAATGTCCTGGTGAT CAGAAGCGTCCTTTTGCTACCATATGCTTATGCTGAGACTGTTTGTAGAGGAAGCTTTGGGCTTGGAGCC AGGTGGCAATAGGTGGAGAAGCCACTGTCTATCAAAGCTGTGAGAGGTGTGCTCTTTATCTTGACAGTGA TCGTTGGTTTCACCTTAGATGATTGAGGCGTATTGAGTTTTGTGCCTAAACAATGCTGGGGGGGGGGGGC ACATCTAGGTTTATAGCATTGATAGCCCACTGTTGTACTGGTCTTTCCTGCGTTGTAGTACTTCAACACC GTTTGGTGAAGTGGTTTCGTTTTCAGCATGAGTGACATGTAACCCCTGGATCAGGCCAGATTTTTTCGGG TGGATGCCGAAGAGTTCCTCCTCAGTTGCGACATTTAAGCTTTCGCTGTTGTTGTGGACACTCATCTATC AATTGCGTACATTACGAAGTGATGCGGCTGAAAAAAAGCATGGTCTTTTCATTGATGCTGTTTGTGTGTC GGCAACTTCAATGCTCTCGCTGTTTTTAATAGTTGCATTAATGTGAGTTTGGATATAAAGCACTGAGAAC TGTTATTACCTATAGCTTTATCCAAGCTTCCTGATAAGGTGCTCATAAGAATTCTAGGAATTTCTTCCTT CTGGGCACCCATTTAAAGTTTTCTTCTGTACACAAAAACTGCAAGTGGTTGTTCATGTGTTTGGTAATTG AAGTTGTATGTATTTTACGTAATTGTTTGTTCTTGAACATGTGCAATGATAATCCGATGTCCTTTGAAAA TGATAATTGATTTGTCAATTACTTTGAATTTAATAATCTCTATATAATGGAATGCAATATAATGTCCTTT GGGATTACTAAGTATTCAAGCAGGTTGACATGTCTCCATCATATCAGCAAAAGCATCTGGTACAAAAATA CAAAATAGCAAGAAATAAAGTTATAAACACAGAATAA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds