Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_776910.5 PREDICTED: Strongylocentrotus purpuratus probable protein phosphatase 2C T23F11.1 (LOC576623), mRNA CGAAGCCATGTTTTCGTACCTGATCAATTCAATCAAATGCACGGTTTATATTGCGTGAATAGAATAGGAA GACTCATAGAAGAACGCCGAAATACATGGATCTCATGACATTTTGATCGCTTTGATTAACGTACTAACTT AGGAGAGGTAGAGATGGGTCAGACGTTATCCGAACCTGTCACTGCCAAAGAGACGTCAGGATGTGAGAAC CATCTTTGCAAGGTCGGTGCCTCCTGCATGCAGGGATGGCGAATCAACATGGAAGATGCACACACACAGA TCCTTGCTATCGATGATGACAAGGATTCTGCTTTCTTTGCAGTGTATGATGGCCATGGAGGAGCCAAAGT AGCTCAGTACGCAGGTCAACATCTGCACCGTAAGCTAGCCAACCAGTCAACGTACAAGAGAGGAGAAATC AGCACAGCTATTAGAGAATCATTCTTAAAAATAGATGAAGATATGCTCAAAGATGAAGCGATGAAAGACG AACTAGCCGGTACCACAGCTCTAATTACTGTGATGAAAAATAATAAAATTTATTGTGGTAACGTAGGTGA CTCGCGTGGTGTAATGAGTATCAGTGGGCATGCAAAGCCACTATCATTTGACCATAAACCAAGCAATGAG AACGAGAGTAAGAGGATAATAGCAGCTGGAGGATGGGTAGAATTCAATAGAGTAAATGGAAACCTTGCAT TATCAAGAGCATTAGGAGATTTTGTCTTCAAACGAAACCTGAGTAAAGGACCTGAGGAGCAGATAGTGAC AGCTGTACCTGATGTAACAGAGACAGAAATCCTCCCCGATTCAGAGTTCTTATTATTAGCATGTGATGGT ATCTGGGATGTGCTCACAAATCAGGAAGTAGTGGACTTTGTACGAAGCAGGATAGGGAATAAAATGGATC CAGAAAAGATATGTGAAGACTTGATGACAAGATGTCTTGCTCCAGACTGTCAGATGGGAGGGCTCGGGTG TGATAACATGACCGTCGTCCTCGTGTGCTTGCTCCAAGGAAAATCATATGATGAACTCAATGCAAAATGT GCAAAACCAAAGTCTGATAAGTGTCCGTTTGAGATCGCTCCTGTGCAGCTGTAGGTGTGGAGACGGTAGA AATCCCTGTCAATTTTGCAAAGTGAACGCTACCTGGATAAAGCCAATAGCATGGACAGACAGACAGCAAG CAATGGCTGGTTTGTGTATGTATCAGCATTTTGTGATCATTTCCCCCCTGATAATGCTCTGTGTGTAGAC GTGAGAATGTTCTTCAAATCTGTTCCATCTTATATGTAAAAGAAATTCATTGTTAATTCTGGTTTTCGTG TGTGTACAACATTGTCCTCATTGGCGGTGTGTTTTATTTCATGATCACTACAGAAATCACAACAATTTGT TTCTTTGTATTTTGTTGATCCTGTCAGAGCCAAACAAGAAAATTTAAGAATGTATTGGCCTCCTTCTAGT TATTTCAAATTTGGAGGTAGGCAGACATAAAAAAAATCATGATCTTTCACCTTCTTATTGGAATCCCACT CTGAAATTGCCCCCTTGTTCCGGAGGTGCTTCCAGAATGCAGTAGTGATGATGTCATCCCGATGATGTTC TGCTTTCTCTCGAATGATTTTGACATCATAACGAGACAAGCCACGCACTTACTGGAGGTTGTCATCAGTC CAGTGTTTACCCCTTTATTAACCTCAATACATCACAAGACTCAAAGTGATATCCATCTCATAGTCAGTAT GATTATATTGAGTTTGTGTTCAGTAGAGCTCAGCTTATTTTTGACTTGCTGTATGCGTTTTGTGTTTGGT CATGAGAACACTCATCATCACCATCATTGTTGAGCGTCCGTTTTTCCTACACCACGCTTTAGGGCGTTTC ATTTCCTTTATTGCCCTTCTCCAAGCTGTCCGGTCTTCATCATCCGCTGGGGTGAGACCAGATGCCCTCA TGTCTTATCCTAGTGTCTCCTTGGGCATTTTGAGCCGGTGTTTTGAGCCAGCCATCTTCGCGAGGGATCC GATTTCTTCTTCCTGCATACTTCTTTTGATCCTCTTTTCTATTTTTTCACTTCCTCATCGAGGTGACCTA TCACATAAACCGATTGATGTTCATATGCCTCAAATCCATGCAGAGATCATATTGTTCATTGTGGAGGAAA AAAGAATGCCAAATATAGGTCAAGGGTCATGTATGAAAGCTACTAAAATAATAATAATATTGGATTCTTA TATAGCGCACGTATCGACCTTGCAAGGTCCTCAAGGCGCTCCAACATTACCCGGCTATGCTAGGCTGCCG ATTTCGATGCTCACAACATTCAAAGGAATTCCTTCCTACCGGTACCCATTTAATACAGAATATTATGTTA CTGTACACCTCACATAGCATCAGTTTGTCATAACTTACAGAGCAAAGCATTACAAAGCACCACAAAGCAC TTTTAACAGGGTACATATGAAACATTAGAAGTTGAATTGAAAAACCAGTGGCTTTGTTTGAGGATTAATT CAGACTCTGTGTTCCGACATCATCATTTGACAACATCTGATATATCGGGAGATTTCAGACATTCTTATCA GGCCCGCCCTTGTACATTTTCTTGAAAATGTTTATGATTATGTGATGTCTACACATTTGTTTTTATCCTG TGATGTTGTAAATTGTGTGTTCACCTTTTGATTTAGATTTCTATTTTATTTACATCTTTATTTCTAGCAC GATACAATCCCCATTGATTATGAAACATGATTTTGAAAACAAAACGCAAACCATTCTTCATTTACTTGGA TGTTTTCTATTGAGCATAGATATATTTTATACTACCAATGTTCTATTGAATTCTCGAAACGTATGATTTT TCATGTTGTGTTTTTCAATGTAGCGAGTACATGTAGATTGTACTGTCAAATAGATTAATGTAGAGCGTGA TGTTGATTTAAAGGGTGCTAATACCTTGTGCCCCAAATCACTAACAGAGATAAGGTTAGTTAAAATCCGG AATAGGCATTGAGTCTGGAAGCGATGTGGAAGGTGGGATTTGATAAACGAGTACCGGTAAGAGAATTAGA GTTCTGTGTGTGTGAAAAGATGCACAATTTTATCGCTTGTTGTTTGTCAATAACTGTAAGATATGTTAAT TGTATTAAAACTTTTTCAGAAGGGTTTAAAAGTTGACTCTCTGAATTGTACATGAATCTGTAATTAAACA AAAAGAAGAAAAGAATAGATTGTATGTATATGATGTCATGTATTCAGAGTGTTATCCACATGTAAGATGG GAATCAAACATAATATAGTATGAGTGTGTAACTAGTGTACTGTTATTGATTCCTGTTTAATGACGTGATG CACCTGTATTTCAAATGGAGGTCTTCCGACCATGTGTTGTTACATAGAGCCAGCCAGCCAAACTCAAATG CCGTTTGCTGCTTGTTCAAAAAGTCAAGGGTTATTTTATAGGACTAAAATGCTTATTTTGGAAACGCCGT CAGTCAGCCTGTATTGTAAGAGAAATGGTTTCAGCTTTTGCTCTTCAAATTGGCTACACTAAGTATTTCT TACTGCTTCTACAAGCATTGTTCTCCTACATTGGAAATGTAACATATATATTCAATATTCATATTGATGC TAACAATTTGCCAATTTGTATGAGAAGATTTAGGGTGAACTCAAGTTGCCAATTTAAAGATGGGATGCTT GTTTTCCTAGAAAATATTCCATTCAACGAAATACATCCTGCTGCATTGAAGAAAAACAAATGCCACCGTA TTTGTGCTGGATGCATATTTTGTAATATGGAGAATTCTTTTCTGATATCGTAAATTGTGATCTGTAGGAT CTGAATGTGCTTGGGTAAGTGGAATTAGCATGCATCTGAGATGTGGATTTTAATCCTGCAGCTATGTGTA ATTACTACAACATAGCGTTGTGGTCCAAAACTACCAAGTTTGTTTGGTATTTTGTTCATACTACTACCTG TACTGTTAATATTCCACCGCTAGTTCCTGAGGTGTGGTGACAAAAGTAGGATGTTGTGCATACTGATTTA TGGAATGTGCTCTGACCAAGGTTGATGTTGCTACTACAGTCAAACCTGTCTATAGCGACCACCCAAGAAA AACACAAAAGTGGTCTTTGTAGACAGGTTCCTTTAGTACATATTTCAATAATAAACCATTTTCCAGGAAA ACAAAAAAATGTGGTCTTTGTAGACAGGTGGTCACTAAAGCAGGTTTGACTGTATCTCAGTTTGTGAATA CCATTTCCTTATTAAAGTTGTATGCTTCTTGGGTGTTGTTATGATCATGTCAGAACTGCCAATGTTACAA AATCACTCTTTTTAACGCATTTGTTAGGTGTCTGTTTACAAAATTTGGAATAGATCCTTTATGTAAATTC GTTATAGTGCTAAATCCATTCAGTCATATCCAGATATATCTGAGAATACGCATACTGGTACGTATTAAAC TTTAGAGCACATATCGTAAATGATATTACTGCAGAGAAGAAAGTTATCTTCATGTAGAAGCAACATTTAG TCAAGGATGAAGGTTTGTCTGTGGGGGCAAAAAGAAGACATTTTGACCGTTTCAATTATAATGTCTACAG CTGGACCCCTTTAATGAGTTAAACACTGGTCTCTGTTTCTGGTAGGAAAGAAAGGATGTAGCTGATACTT AAATAAAAACAAAAAATGCCCAATGTTTACATTAATGCGGCAACACTGGTCTTCCATACTTTAATAGTCC CATTTTGCCCATGATACATCTAAATGCTGGGAAGTCCCAATTATTATTCAATCATTTTAGTGTATTTATT AAATTATTGCTTATTTTTTGGTTGTATCATTTCCTTTTCTGCTTTATATTGTCCCTGTGCCTTTTTGTAA AACATAGCAACACCTGTATTGAAGGTTAATTTCACGCACATGAATATTAGGAGGAACATTTTGAGTGCAG GAAAATAAAAGGTATTTTGATTGGCATTGTATGAGTCAAAATTAGGATAAGTAAAGTTCCGGTGAACTTT AATCGCATGGTGCATATCATCACCTACATGTACAAGGACGTTACCTCTGTGTGAAAGTTTAAGGGTCAAT GACCTACTGGCTCTCAGCATATCATATCTTCTATGTATTTACATTTTTTTTCAAGAATTAATATATTGCA TTGATATAACACAAAGCTATTGACTTCTGATTTATTGATTAATCCAAGTAGTCTGGATCAATAGCATTTC AGCTAAATCTTTTGATTTAGTTTGACAGATTATGAGTTTGCTTGAATAAAAGGGTTTACATGTACTTTGA TGATAGAAGTATGTATTTGTACAGCGGTGAATTGTATGACGAGATTAAACTATTAATGAAACAGAAAAGC ATTGATTTTTTTTCTCATAAATATACCATTTTTCTGCCTCTTAGTTTGTCTCTTATCAACCCATTTCATT GTTTTGCTCTCTGAAAATTTGGATTCTTGGATACCATTCTCATTTCTCTCTATTTTTCTCAATATATAAG AATATTAAATCATGTGATTTCATATTTCACAGTTTAGTAAACTTTAAGAGGCCCAATAAGCTTCATACAA GATGTTGTTCATTTCCAGTAAAAATAGTATTCTCTGTTGACTCATATTACATTAATCAAGACGAATGTTT TCCCATTTTATAATTCACCGCCACAATAATTTCAACACTGAAAGAAGCAGACAGAATTCAAGATTAATGC CGGAAGCTCAGAATGCTGTTTCATCTTTGCAAATGAATCCCTTACCTCACAAATCTCAGCCATTTTGTAC CGAGTTCATAAATACTTCATTCCCGTAATCTCGTTTTGTTTTGTGGGTTTATTCTTTTTGACATCAAAGA GGGTTTGTGTTTTTGTCTCACACGTTGGGGCACCAAACTGTGTTGTGATTTTGATCAAGTTGTATCGTGT TTAAAAGATTAAATGTACTGATGAAATTCATCATACATGTGCATCTAATTGCAAAGAAAAATTATATATA TAATGCAGGATTGGTGATTTCTGCAAACCCTGTGCTGTGATGTTTTAGGATATACACTTGTACTGATGTG TAATGATTGCTCTAATGAAGACACAATTCATCTGTTCAGAACCAGAAGGCTGTTAACTCTGTGTTATTAA AAGCATGAGTTAACACCCTTCTGGCTCCAAACAGACCAATTCATTGTAAACCCCCTCTATCGTTCATGTT GTTAGCTAACTGATGTTCTAGAGAGTACTGCATTTGAATATTTTTGAAGAAAACAAATAATAATGAATTG AAGATGACTTGTGTGTATGTGATCACTATGTAAATAAAAACTTAAACCCACCTTGGTTTGCCTCCACTTA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds