Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030980427.1 PREDICTED: Strongylocentrotus purpuratus la-related protein 1B (LOC575659), transcript variant X2, mRNA CAAGGAGGTAACATCTCCCAGAGTCAAGGCCCACCGGTCGACAGCGTCATCCTCAGAGAAGGACAAGCAG ACGGAGGATGGAAAGGGTGATGGACAGAAAGGAAACAAGAAAAATCGTGCAGACAAGAAACAAAAGTGGA TCCCCCTTCCGCTGGACCCAGAGCCTCGAAACAAGGGAGGCCGAGACCGGGATCGAGACCGGGGACGCAA CGCCTCAGGAGGCGGGAGAGTGAGGGATAGCCGGCCGGCGCGAGACAGCGAACGTGAGATGAACTGGCGT GATGTGCCACGCAGCACCGGTTCTGAGCCAGCTAAGAGGCCGGAGCGTCCTCGTGGAGATGGTAGGAACA GCAGAGAAACGTTGACAAAGGCCGCTGGCTTTGCACCTCCCAAGGACGAGAGGAGTCGCAGCCCGAGTGC ATCCAGCGCCGACAGCCGGAGTTGGCAGAACCAGCGCAGCTACCGGGGCAGAGGCAGGGGTAGAGGTAGG GGCGGAAGAGGAGGACGAGGGCGTGGTGGGTACTCCGGTGGCTACTGGCAGGGCAACAACGTGGATGTCC CAGTAACAAATAACAATGAACAAACATCTCCAGATTCTGAATTATTCCAAGAATTTGTGCCACAGTACTA TGACCTGGGCAGCGCTGAAGCCGCAGGAGCTGACACCGGCACCGGCAATGGAGTCCCCGCGGGCACCGGC ACTCCTGGTGCGGGAGGGGACGCAGACTTTGAAACTCCACAGTTTGTGACACCTCAGTACAACAATCCTG TATTCTACGATGGCTCCACACCGGTGTTTACCCCTAGCGCCGCCTCGACATCTCCATCATTCTCCCTGGA TGAAGGCACTCTCAAAGACTATGTCAAAAAGCAAATTGAATACTACTTCAGCGTAGATAATCTTGTGAAG GATTTATTCCTGAGGAAAAAGATGGATACCGAGGGCTACCTCCCTCTCAGTCTCATCGCCAGTTTCCATC GAGTCAAGGCTCTGACTAGTGATGTTGGCGTCATCACCACGGCCCTGAATGACAGCACCGAGGTGGAGCT ATCATCGGACAAGTCAAAGGTACGCTGCAAGCTCACCCCTACACAGTGGGTCATCAACGACCCTGGCACA CCCACCAAGATTGAGCTCTCCTACGACAGCCCCGAATTCATCCCTGGCAAACCTTACCCTTACACCTCAT ACAATAACGACACAGAATCTGCACCCGTGTCCCCTACACCTGTGGAGAACATTCAGTCCAGTGAGAGGAG CTCCGAGAGGGAGGCCACCGGTCAAGGGATGTCCAGCATGAGGGTACCCATGACTCCAGGACTGTCCACC AGCCTACCAGAGAAAGAACCAGGAAACTGGACAGAGGTGAAGAGAAGGCATAAAGCCCCAACTCCAAAGG ATAAGAAGGTCGCATCATCGCCTCAAACAGAATCTCAGCAGGAACGTTTTGAAGGAGCCGCGGAGGAGCT AGACTTCCAGTTTGATGAGGAGCTCACTGAGATCACTGGCAGGAAAAACACTTTCTCGGAATGGTCTGAT GACGATGACGAGGACTACGAGATCTCCGACAATGACCTCAACAAGATCATCATCGTGACCCAGACTCCTC CCTGTCTGAAGAAGCATCCTGGAGGGGACAGGACTGGGTACCACGTCTCCCGCTCCAAGATGACCGCTAA CCTGGCCAAGGTCATCAACGATGGACTCTACTACTATGAGATGGATCTATGGGATGACGACGAAGAAATG CTCAAGTATGACTTGGCACTGATGGCAGCGGCCGGTGCCCCCCATACGGCTTTCAGCAAAATCCAGACCA TCACCAATGAAGAGTTCTCCTGCCTGACACCAGAGAAGCCCCACACCAGGCAGGTGATACCCCCTGCCCC GCCCCCAGAGGGCATCCCGGAGGAAGGTACCTCTGCCCAAGACGGAGAGGAAGGGGGCATCCCCATCCAG AAGAGCGCAGTGCGTTCAGTGAAGGCCGATTCATCGATGGTAGCGAGGTCACTACCCACAGCGGTCCCAG AAGGCCCCCACCTGCGTGAGGCCATGAGGACACCACGCACCCCTAGGGGTAAGGCTCAGATGTCACCTAG GTTCTACCCGGTCATGAAGGAGACCAAACCCATCGATAACAAGACTCCAAGGAAACGCAAGACCAAGCAC AGTGAGGACCCACCTATAGAGAGCCACGTTGGTTGGGTGCTGGATTCAAGAGAACATATAGCTAGGTCAA GACATACATCCACCAGTTCACCATCTGAGGGTGCACCAATCAGCACCAGCTACGGTACTCCACAGAGCTT CCCTAAGTTTGAGCATCCTTCCCACGAGCTTCTCAAGGATAACAACTTTACTCAGCATGCCTACCACAAG TTCCATCAAAAGTGTCTCAAAGACCGCAAGAAGCTTGGCGTTGGCAAGTCGCAGGAGATGAACACCCTCT TCCGTTTCTGGTCCTTCTTCCTCCGTACCAACTTCAACAAGAAGATGTACGACGAGTTCAAGAACCTTGC CGTGGAGGACGCCAAGCAGGGCTACCGCTACGGCCTGGAGTGCCTCTTCAGGTACTTCAGCTACGGTCTG GAGGTCAAGTTTAGACCAGACATCTACCAGGACTTCCAGCTGGAGACGTTAAGGGACTTTGAGTCAGGAC AACTGTACGGCCTGGAGAAGTTCTGGGCCTATCTGAAGTACTCCCGATTGAGAGAACTGACCACCTTGCC CGAGTTGGATGAAGCACTCAAGAAGTACAGGGGACTAGAGGACTTCCGAGTGGAGCCCTCTATCAGTGAG AACAAGAAGTCTGGTGGGCCGTCTGGGGACGCCAAGAAGTCCAGACCAAGCCGCAGCAGGCAACAATCCA CATCGGATCAACAACAGAGCACTCTGGAGGCCCAGGGTGCCGTCGGGGGTTCAGGTGCTGTCGGGGGATC GGAGGAATGAATAATATCACGCAATTCATTCGCTTCATTTGGTACTAGCACACTGTCACACCGCAGTGGT ACCCGCCATGGAATCAATCGTCTGGACAGCAATGTAGCCATTGAGGGATTTGGTGTCGGTATTGCCGTTG GTGATTTAATAAGCCAGTGAGCATGCAGTGTTCCAAATCATCAAAACTGATCTTGTTAGCAATATCTATG GTATGTTTGTGAACAGGAACAGATACTAAGTGGAGTCATCTAGTTGGCATGAAGTTTGAGCTTCACGGTT CAATACCAGGACTGGTTACATACTTGCCGTCTTCAACTCTGGACTTCTCATGAAGACAAGTTATTTCTAA GTGGTAAGAACTCCATTGTGATACAAAGTGAAAAGTGGATATTCTGGGGTCAATCAGAGAAATTCAGTTT CTACGCCACCGAATATGAAGACAATTTGGCGCTGATGGGTCCTTGCATGTTTGCTGGCCAGAGAGTCTTA TGCTGCCATGAAATTAATACATGGCTACACCGAGTAGTAAGGCATCACCATGAAGCAGAAGGCTACCATC ATCATAGCTTGAAGGCAACCGATGTTCTCCTCACCTCGATTTCAGAAGTTGCCTGAATCGCTCATAGTCA TTCACTTCAGTTTGTGTAGACATCACCAATAATGTATCTTAGTGGGCATAGTGTGGTTATGTGCTAAAAA GAAGACTCCCCATGCATAGCAATACAGCACAGATCTTACCCACGATGAAACCTGGGTAGAGTCTGACGAA ACCGTTGAAAGTACAAGTTTCCCGATATCCCATTTAAATGTGTGTTTTAATAGTGTTTCAATGGGATATC GGTGTATTTATGATGGATTCGTGAACAATGCCCTGATTCTCTGCATTAGCCCTTCTGCTCATTAGCTTGC GACTAGCTTGTAGCGTCCATGTTTCTGTCTCTGTGTGTAGCTATCACAGAGACGTAGAGAGATTAGTTAG ACATGCCAATCGGATAGATATTTCCCTGTGAGTTCTTTGACCCTCCTTACATAGCTGTGTAGGTAGCTTA GATCCTATCTGATTATTACAAGCAAAACCATTATGATGGAATGAGTACCCTGCTCATTCTAATGAATCCT TGGAACGCTTGAAAATGAACTTTTGCCAAAGGTAGATCATACCCTTATAGTGCCCCATATTGGAGTCAAA GTATATCATGTACTCGCTTCAGAAACTTTTCTGATTTGACAAGGAAAAAAATGGTAAGATGTTATATTTG AAGTTGTATTATAAATCTAGTTTTCCAACAGCAATAAATGTTTGTGTTCGGTGGTTTTTCAGATAAATCT CTGATCTATCCGCGTGAGTTTGATTTCGTACCAGGGTTTAAGAAAAATGGATTCAAGGCTCAGTAATTCT CATAGGACATGGCCACTTCAGGCTTGTTCGTATATGCTCCGCTGAACCGTGGTGGTTTACCCCGGCAGTT TTTTGTGTTACACTTGAATTTTAGGTGGGGATGAAAAAAGGAACTGTAACACTGGTCCTGCGTGTACTCA CTTTAAAGTGTTATGAGATACAAAAATGTGAAGAATAAAACCCCTGCGGTAAACTGCCACAGTGCACAGT GGTAAATGTGAATAACCATTATTAAAGCAGACTCCAGAAATTCACTCAATTCCCTTTCTTTAGTGATTTG ATCAAATTCTCAGGTTGACTTAGCCTAGATTATGTTAGATGGTAACTCCAAACCCCCCTCACTAGTTTAG TGACAACCTACCAGAAGAGAACAAAAAAGTACTTACAAAGCATAAATATAAGTAAATATATTCGTTTCGT CCTGGGCATCGTCCTGTCAATATATATTATGTACTTGGACCCTTATTATGCTGCAATTCTTGTTAAGTTT ACATTAGTTTTGCTTGTTTATATCTACTCGGCAGTTATGTAATTCATTGTTATAGTGCATGGCTGCAGTC CAAATTATACTAAGATGGGAAATGGCTCGTTAAGCCACAGGAATTCTGTAGCAGACTTTAGTTAAAGAGA ATTTTTTTTTTGTTTTTTTGTTTTGTTAATGAAACTACTGAGAAGGTATGTAAGTAAAAGATTTTTTCCA GCACAGAATGTGTTGCTGTCAGATGTTATTTTCCTGTTATTAAGCAATTCTAGGAATACAATGAGAACTT AAAATTATTAAAATGGGATGAAATCCGAAAGCAGTAATTTTGATATATATTTAAAAGCTATATGTCAGCA ATAAGAATTTTTGTTGTTGAAAAGAGCTACCAAGAGATGCTGTGATTAGTCCTCCAGAACATTCATCAAG GTCATTAATAATATGATTTCAGAAATTTAAATATTATTTCTCTAAGGCAATAATAATCATACTGTTTCTC ATTTTCTAAATTTGTTTATGAGCCCTTTCATGATACTGATAGCAGTATATAAGATTTTATCTCATGCTTA AAATATATCATGTTTGGAAGGAAAAAACAGGAGTAAAATGAAGAAAAAAAAGTCCCTCTCTTTTATACCG CCAATAAAGGTGGTGTCGGAGGCATCATTTTATTTACCCTTTCTCTTATTTTAGGTCTTGGTTAGATTGA AGACTTCTTTCGGTGTGAATGTAAATACTTAGGAATTTATACGCATATAAAAAGAGATATTATAATAGGA CAATTTTAGTTAAAATGCCACCAAGATGTACTTGTTTATGTCCACTGTGTGGAATTAGATTAGCCATCAC ATAACCGTCTTGAAAAGTTCTATCAAGTTATAAACATTCCCTTGATCAATTTTATTACAATATTTTTTGT AGTTTCTAGCTTTACAAACTATTTGAGTTCTCATATAAAACACTCATTTCATTTTCATGGTATTTGCAAT TTTTATGGCAGTTTCTTGCTCAAGCTTTTATTAGTTAGTGGTGTGTATTCATGAGGCATATCTTATGTGT TGACACGGAAAGTACTTGGTTTGAGGGTCCTTTTTTTTTGCAAAATGTGCAAGATGAATAGATCATAAAT ATCAAGCAATTACATTTTTTTTAAGGTATTGATTAGATTCATAGATTTATGAATAATTATAAATTTTAAT TGGGTTTGGGAGCTAGATTCTATGTTTTATTTGAGGACAGCATACAATAATGTCTAAAATATATGTTTTT CTTAATGAAACTGCAAGAAAGCATATTTATTTTTATTTTTAAATTACAAGCTATATTCACCTTCACAAAG TATTATGCCATATAGAGTTTGTTATGGTCAGGAATATAGAATGCTATGTATTTTATGTTTATAATATCAA TAAAAATGCTGGCTCCAGGAGTTTGTTTTCTTCTTTTTTTCCTTCAAGGTAAACAAGGGAAGATAAAATG TTGAAATAACTTTTTTTTTAATGAAAACAGTGATAACCGTTAAAAGCAGATGTGCTTTTCAAAAATTGTT TTAAAACGTGTTTTTTATTGGCAAGGCTTCTGAGAAGAATCATATGGGGAAAAAAAAAATGTAAAGGGAG GTTTGTTTGGATTTTTTTTCTTATAACATTTATCCATATGTGTTCCTGCTTATACTAAAGATTGTTAAAT AAATACGATCGAAATTTCTATTGGGGACGTTAAAAATGAAGTTGATACTAGTGCAACAAGCCCTTTGTTT TATTTTGTTCCTGTTAAATAAGGGTGCAAATATAAAGGAATAGACTTTTTTTGAAAGCAGGACAGTTTGT CCATTTAGTTATAGTGTTTTAAATGATGCAAGATCTTTAATGGTTTGAGGGGAATGAAAAGAAGGGAAAA AAAGAAGAAAAGAAGGGAAAAAAAAGAGAAAAAGATGATTTGAAATGTAATGTGCATAGTGTATATACTG CAGAATGACTAAATTATGTAATTATTCTTTTAGAAAAGTATGTTGATGTTTGAATTCCTGCATTGGCTTG TTAGTATACATGTAGTTGCGAAATATTTGACAGTATTTTATCCAAATAGGGAGAGAGAAAAAAAATATGA AAAAAAAAACACAATGGAGTGATGTATGAACATTTGCCTTGCATGATTATATATTGAATTCTTACAGAAG TATTTTGAACTTTTTACATCTTCCTATAACAAGACTTGTATTTTTTCTGTAAATAATGCTTTTTCTGGTG GTGATTTTACTGTGATTTCTTTTGATGATATTACAATATCTTTTTGACTTGAGTATTACTATTATAGTAT AGTTGTGGGTTTTTTTCTCATCCGTTGAACATTTTAAATTCTTTATCATGTATGGGGAATATATTTTTCA AGAAAAAATTTATCACATGTTGTTTGTTCAAAGAATTTAATTGCATTAAAAATAAAAGTGAGTTGTCTTT TATGCACTATTGAAAAGCATGTGTAGTTAAAACAATAGAAAAAAAAGAACAAAAATGAATTTGCAAGCAA AAAAAAAATAAGTTTGTAGGACTATAAATAAAAAAGAGACTAGACATTGATATACGTATGATATAATTAT GAGTAATGTGATATTGATATAAATTAATTCCTTGTTTCTATTTCTACTGTAGATCATGATCTGTCTGTTA ATTTACCATTTACTTGGATACCTTGTTTGGACTTTGTGTATGGTTTAATTTTCTGTCACATGTTCTCCTT CCGCTTTCATGCATATTCATATTTTATACTGTGCAATGGTGAAATTGGATATTACACTGGTACATTGTAT CTGTGGCAGCTTATACACACATATATGTTACCCGAGTGTAAGGTTGTCAAGGCAAGAAACTTGATGACAA CTATGATAAGGCATGTTACATGGTATTCGCGACTTATTCAGTAGTATTTGATTTTCATGGACTAATCACT TCAGCGTATTAGATGTATAATCTCCAGTTTGGAACAAATTTTCTCTTGTTAGATGCAAACATCTGAAGGA CTGATGTTCTTATGCAATTGTTGATTTGATTGATGCAATCACATTTCATACACTCCACCAAAAAAAAAAA TTGATTTCTCTGGAACATTTTATTCAGATTTTTTAACATATTGCCTATCATTATTGAGATGTGGGATTTT AATTCAAGGATAATTTGAAGGGAAAAAAAATTCTTTTAAAAGAACATTCATTTATATCAAACTTTACTAA CTATATTTAAAAAAAGAAGAGTTTCATTTTAATTTGTATATTCATTGTTTTAGGTGCCATCTTCATGTTT TTGATTTTTAATTTTTATTTTCAGTTTTTGCTATCTGTGTGAATGCGTGATTTTGTCACTCGCTGCTACA TGTAAGTCTTGAGATCTGAATGATCTGGACAAAATTTCTGCTCCGGACATCGCACCAAGCACATTGCATC TATTAAAGACTTCTCAACATGCAATGCTCACATCATTGTGAATATTGCTGTAAAAAGAAAGTTATTTTAG AATGTTTTTTTCCTAGTAGTGGCTTTGAGTGCAGCTAGCCAATGGAAGTTTCCAGTTGAACTTGTTTTAA GGGGATTGATATTCTGGTTGGCTTATATTCCAATAAAAATTTAAAAAAATGTTTTCTGTTTGTGCCTTTC TCATAGATTTTACAAATTACATCTTAAACCAGGGTCATGGTGAAGTGTTTCTAAGAGATGAAGCTCCTGA TGTTTCTTTTTCCACCATCCATTTTCATCCTTGTGTACTACTCATCAAAATGTTATCTTGTATCTGTAAT TTGCCATTCTCCCAGATTTTAATTCTTTTGTTTATATCGGTTGCTAAAACTTCCTAAATTCATGTAGGTA GTTATTTTCGTATATGAGTGCACTTTTTTTCTGTTTGCTGTTGTATTTGAATGCAAATTCACTTTTAGTA CTTGCTTCCACCCCATTTCTTCATACATTTATCTTGAGAAAAAAAAAAATATATACTTGACAAAAAAAAA GTTCTAAAACCTTTTTAAGCACTATTTTATCTTGTTATGATGTATATGGTGGGAAATACATGTATACGTA AAGTTTACAATTATATGGGATTGATTAAGAGGATTTCTTGGCTAATTCAAATAGACGGAATTCATTTACT TACTCGAAGATGGTAATTCATATCAATGTTTCATTGTAGCCTTTTATTTACCATATTTAGTTTGATGGTA AACAAAATGAATATATGTAAATATAATAAAAATTA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds