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Echinobase
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
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>JT104288.1 TSA: Strongylocentrotus purpuratus WHL22.470543.0 mRNA sequence CATGCACCTATCTGTCTTGTGTTGTATCTTCTTGTATAGGATATGGCACATTGACATGCCTGACAGTGCA GCGCTGAAGGTGTTCCCTCACCCATCCTTTGTGTACACAGCCCGTTATCATCCCACGTATGAGACATTCA TCATCACCGGTGGCTACGATAACTTCATCAGGGTGTGGAGCATTGAGAGCAACTCACAGACTGGGGAGTT GATGTATGAGTTGAAAGGTCATGAAGGCTTTGTCAATAGCATAGCCTTCTCACCAGATGGGATCTTCATG TATTCTGGGGATAGTGAGGGGAAAATCATAGTTTGGAAGAGTGCAGGTTCTGATGGTAATTGGATGATGA GGCGGCATGTAGAGGATAAAGAACTGATGGGAGTTCCAATCAACAGTCTTCAGGTACATCCTAGTGGGCG TCGTGTTATTGTACACTGCAGGGATAATCACATCCGTATGCTCGACCTCAGACTGTTTTGTGTGATGCAG AACTACATTGGTGTGTTGAATTTCCGGGAGCAGATCCGAAGCATTCTCTCTCCTTGTGGGTCGTTCGTCT TCTCAGGGAGTGAGGATAGACATGGCTATGTGTGGAACACAGATACTGGTGAGCAGGTAGCTGCCTACAC ACAGCTTGGTTATAGACAACCTGTATGTGATGTAGACTACCACCCTCATGAACACATGGTGGCGCTATGC TCGCGGGGTGAGGGACATCCAATACAAGTCTACATCTATGATGCTAAGGTTGCACATTTGACCATGGGTT TTGCCAGGACGAAGCTTGGGAAGGAGGCTGAAGATGGCAACGTGACAGAGGAAGAAGAACGTCTTGTTGG AACGCTACGGACTAAACATGATATAGACCAGGACATTGAGGATAAGAAACATGAGCGTCTTGCACGCGTC AAGAGAAAGCTTGCTTCTGTCATGGCTATCCAGAATCCTCCATCTGATCTCAATCAAACCACTGCATCCA TGCACACCTCTGGCTACGCCCCCGGCCACGCCCCCGGCTACACCCCTGGTGCATCGGCCCCCTATGAGAC ATGGGGATCTACATTTGATTACTCCACCACACCCTGGCATACCCAGACTGCAGGTACCCTTGGTTTCACA GGAGGTAGAGGAGGCCCAGGCTTTACCAGCACACCTTACAAGAAAGGACCCATGCCAACTATCAACCTCA ATGCTGAATCTGACGGCAAGGCCATATTCACTTTCAAAGCCCCCGTGGTTGAAGACAAACACAAACAATA CAACAAGGTGGTTGCTCTATACAACTACAAAGCACAGCGGTCGGATGAGCTCAGTTTGGAAGTGGGTTAT GAGATAACAGTGCTTCATAAAGATAATGAGAACTGGTGGATGGGACAGCTAGCTAATGGTCAACAAGGCT ACTTCCCTGCTAACTATGTCAGTTATGAAGGTGAAGAAGAAGATCAGACACAGATGGCATCCCGTTACCA GCTAGAGCAATCTGGTCTGGATGAGACTGATGCAGGCTCACCAAAGAGGAGGAGTCAGGTCAAAGGTCAA CATAGAGCCGGGTCGACACCAAAGAAGCCGTCCAAAGAAAGGTTCTCTGCTGTGACCACCAAGTCAGGTG AATTGAAGTTTATATCAGGAGCTGAGGATAGTGAAGTAGAACTGGTCTCATCTCTTGCAACTCCAAAGAA GAAGAAGAAGAAGACTGTGAGACTGGCTGCCAACCTGGATCAGAGTGATGTCATGACAACAGACGGTGAA TCCCCGCGCCACGCCCGACCTCCAAAGGGTCACTCCAGGTCACGTACAGCACCCCATCTCTCCAGTAACT CTCAGTTAGATGACTCTCAGACCTCCGTTACCAGGACACCACTGAGGAGGAAGAAACTCAAAATGAATGA TAGTCATAACATGGAGGACTCAGGGACAGACGGGGATGGGGTGACACCAAGGAGTGCAAGGCTACGGAGA GGATCAAGAGAGAATCTCCTGGGAGGGGAGCTGGGATCAACGGCAAAGAAAGGAGGAAAGAAGAAAACCA AGTCAAAACATTTGGACAGTGATGAATCACATGCATGAAACAGTGAGAAAATGATCTCTTTTATGGCAAA GAAACAGATGTGTAGCTGATGTGAATGTCAGATAGGATCACTTATATTAAGGTTGATTTGGACAATTACT GCATGATAATTGTATAGAAGCTAATCTCTGGGATTTCAAGATACATATAAGTAGTTGCTGCATCATCGCC AGTACATAAAACATATGGTGCTATAGTCAAACCTGCTTTAGTGACCACCTGTCTACAAAGACCACATTTT TTGTTTCCCTTGAAGATGGTTTTTCATTGGGACATGTACTAAAGGAACCTGTCTACAAAGACCACTTTTA GTGTTTCCCCTGTGTAGTCGCTATAGACAGGTTTGACTGTATAATGTGGGGAACTTGAGGAAGGGGAGCT TTCAAGGGTAAGTTGTCTGTGATGGGCAAGTCATTGTGCGATTTCAACTTATAAAATGCTTTGTTCTTTG TAAATCATCCCCCTTGGATGCTGCAAGGCTTCCAGTCTTGGAAACTGGTCCGGTCAAAAAAGTTGTGGTA TGAAGAAAAAATACCACATAGTTAAAAGAATAGTTGACATGTTTTCCTCTTGATTGATGCCCTGTTTCGT AAAATTCATTATAAGTACAATTAATGGAGAAAAAAAGCTACAGAAATTGATTAATTTAATTAGCTTTGAG CAAATTTATAGTAGGATGACTGCAGTTGTTGAAAGTAAATTTTATGAAACCGGGCCTTAGTGGAACTATA ACCATAATGTTAATTAAATCATGCATTCATGAATTTATTTTAAAAAGAAGTTAAAGCAAGGCTTGTATAT TTTGATGGTAATGCAGATGGTAGCATATCACTGATGGGCTGGTATGATGTATTAGAGAAAAGAGCAAGTG AATGTTTGCATCTGGTCATTACCCTTCTTATGAACAGAACGGCTGACATAAAGATTATGGTTTATATGAG ATGAACGATTATTAAACTTTTTTACCTTTTTATACTTTTTAGAAGTTTTTTGAAACAGTGTTCAACTTAG TTTCTTACAGTGTTGCATGTACAGTTTTGCTCAATATATTACTTGCAGAATATGCATCTGAGCATAGAAA TTTGAGTGTTTGATTCTGCTTTATAAATCTGCTAGTGGTTAACTATTGATTTCTTACATGTCCATGTACT ACAAGATTCAGAATCTACAAGTCGTTAACACCAGCGGAGCTGCCAACCAGTACAATTTAATTGTATTTCG TACCATTTTTAGAAGTAAAAAACGAAAGTACGATTTCCTCAATAAAATATGATTTTTTGTTTTTGGTATT TTGTGTATGTGTGCCATTTTCAATTGCAAAATGCCCATTCTGTCCTGTAAAGTATCTTACAAGCATCTCA CTTCGGCAATTTGGGGATGTACATTGGTTCATCGAACACACCAGTCATGACGAAATCATGCATATTCAAC CAATGTGATCCATACAAAAATGTCTTCCTGTATTTTTAGGAACAATAAGAGGCATTGATCCATGTTTTTT TTTAATACAATTTTTGTCAGTAAAATACAACTTTTGGGATTAAAGAATACAGGTTTGAACTCCAGAGGTT GGCAGGTCTGCACCAGTGTATTCTAACTAATTCTGTTTTCAGTACTCAGAGCAGTATTCAGATCACTTCA CTTTTGCATTATTGAATGATTTATAAAATCACCTTGAATAATTGTGCATGTAAATTATATTTATGATGAT TTTGATTTATAGGAGAACTTGCCAATGTGTATAGCCTGTAAAAACGATGTTAATATATTCCTTGTTTTAG TACCAGTGAAATGGTACTTATTTTGTATATTACTATGTCTATTTACCTCTCAATATCTTACATAACTTTG GTATTTTTGAATAACAGATCATATTTGAGTGCTAATTTTTAAAGCTGTAACCTAATTTCAGTACTTATTA GTTATAATCATAACTTTGAATTTATATTGTAGTTTTAGTGCTTGTGATTGCATTTGTTTATTTTGTTAGA CTAAATATAGAAGAAGAAAACAAATGAAATTGTCAATATGGGTTATGTTTGCAACAGATTCCCCCTAATC TCATTCAAATTTTCCCAAGCGGCTATTTAAATACAATGAACTTTAAAGCTTTTTTTTATTTTTTTATTGC AACACTGTTTTTAACACCCAATGAATTTGATAGAATCGCCTGTCATTTTTGCAGAATGGCAATACAGAAT GAATTGCTAGTCTTTTTTGCTCTCATTAGTCAGAATTATTTGTGTAAGTAATAAGAACTACTGTACATAT GTATACAAAAAATGTATATCACATTGCGTTATAGTGATCTCTTTGTAAAGTTTTGTACTTTTGTTGAAAT ACTGGTGACAATTTCTCCGTCCTGTCTTGTTAAGTATTTTTAAAAGAAATAGTTTTCAGTGTTTGGGTAA GATGAAAAATATTTTGGGAGTGAAAGAATATCATACTTGTCATATCTCCTGAAAGGAACAGGGATTGCTC TTAAAAATACCTGTACCGGTATATTAAAAATAGCTAGTTACAACATATACTGTACTTGTAAAATTTTCAT GCCATTTTACGTTATATTGCCTGACACTGTTACAGATAATGATTATTTTAAAACTGCAATGTGTTGTTGA ATCATTTTAGGATAGATTTATTCTTGTTTCAAATACTTAATTACTTATGTAAACAGTCTGGATATGTTAC ATGTTTTTTAGATATTAAGTTTCATCCCAAGTAAAATGACCTCAGGCTTAGTATTCAAGGAGTTAAATCA AGGTGATATATGTGATATTTTTAAAGACAATGAGCCTGCAATTGCTTAATATGTTATTTTATAATTATTT GAATCATAACAATTTTGGACACATCCATATTTTATAGCTGATTTTATTCTTTTTTTTTATGCCATATTCA AAGATCTTTGGGGATTATAGATTTATTTGTTATTGCCTTGATTTAAATATTTATGTGACTGAATGTAAAG TAAGTGACATGAATACAGCAAAAGAACATTAACCCTTTCATAGTGCTGTATCTAAACTACATGTAAACTG TACATGCTTAAAGATCAAATCTATTGGACAGTCCTTGAATTAAATATTAATCTTGTGAGGATAACACAGT ACACTGTGAGCTTAGATTGAGACCTTAATTTTAAGACCAGATCACCCAAATGTTACAATGATGTTACTTG TAAAATTGTTATGAATTCTTTTGCTGACAAATATCTATTGTAATATCCAGTTTGTACAAAGGAGAGAGAA TCAATTCAATATATGCAATCAAATGAAAGAAA
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds