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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>JT112507.1 TSA: Strongylocentrotus purpuratus WHL22.701166.1 mRNA sequence ATTAGTGTCCCTCCGATAAATACCCAAAGCCATGCTGGGAGCATCAGTGTTCGCAATGCCTGAATGATCT GTTCAAAGGCACACCCACTGACAGTCACCAATGTTACAGACAGATGCACGTTGATAATGATATCTGCTTC AACCCAGAGAGTCAAGATGATTGTCCAATCAATCCTGTACCCCTACCAGATGGTGCCTCGTCTTTCTTCG TCATCATGCCCAAGTACTCAGACCTTGATATCAGGTTGACGGTCGATATTACATATGGCTCCCTCAACGT TTACGTCACGTATGACTCGGATGTCTTCATCGTGGAATACGACGAAGAAACCCAGCAGCAGATCATCAGG ATCGATGAAAACTACGTCAGCGCGTCAATGCAACGCAAGAGGAGATCGATTCGAGAGTTCTACGCACCAA GCAGGGGGCGGCGATCATCGAACTCGTCAATCTCCACGACCATAGACCCTGACCAAAGCGAACTGACGGA AATCGAGTCCCACGGTCTGAACACGTTCATCAGTATAGATGAGGAGCATTTCATCACACTGGTTCAAGAC TTGCAGAACAGACTCGTCATCACGTTCCCGCGGCGATACCACACCCTGACGTCGCGCCGCTTCTACATCG CCCTCATGGGGCGGGGCGTGGAGGACCAGAACGCGACCCAGGGCATCATGTACTTCCGACAGGACCAGCC TCACATCGATCTCTTCATCTTCTTCTCCGTCTTCCTCTCGTGTTTTTTCCTCTTCCTGGCGTTCCTCATC GGGATATGGAAGGTGAAGGTGGGCGTTGAGGCGCGCCAGCACAGACGCATGCACCTGCTGGAGATGGAGC ACAGGGCGAGCCGACCGTTCGGGCAGGTGCTGCTCTACTACGAGAGCCCCAGCATCCAGACCCATCCAGC ACCCACTGGGACCACCAAGAGCTACTCTCTGCCTAAGAAGCACCACAGGCTGGGTAGGATGAGGGCGAAG GCTGAGACCATGGGAGGGGGAGGAGCGGCCAATAGGGACACAGAGGAAACTGCTCTCAACTCTGCTGAAA TCATTAATGAGAGATTCACACCAGGCCTCATCGCCTCCGAGCCAACGGACGATGGAATGGCCACCGTAGG GACCGTCGTCTTTGCACTACCCGGCCAAATGAGGGCGCCAGTCAGAGCATGTCTCGGGTCGGCCCTGGTC ACACTAAAAACCGTGGCGAAGCAGACGCAAGATACGCAGAACACGACCAGGCAACAGAGGCAGGGCAAGA ACCTAAAGTCAAGTATTTTGTGCAACACAAATAACAGAAGATAGTAAAGCATATCATATATATATATAAA TATATATATATATAATTCAGTATTTTGTACTACGTGCATAATGTAAAACATCTATGAAGAATTGAAAGGA TATTAACTCACTCTGAAAGCATGGCTTGGAGGCCTCCCTGCCCTCGGCAGAATAAAAGATGTAATGGAAA TTTGCACAGTTTAAAACGTTTTACTGCCCAGCACCTTTGTAGAGCAAAGGGGATTCATACAGAAATTTAA AACCTAGAATTGACGTTTGTGTATACCGGTGGTGAGATAAGGGTCCTTGAAAAAAGGAACAGAATATGGA GCAATCCAAAACACTTGAGCTACTTTTATCACCATTTTGAAAGACCCCAGGGCCCGTCTTATAAAGAGTT GGGATCGTTTCAAAATCAATCGCAAGTCCTCTAATCAATCACAAGTTTGCAGTCCCCTATCTCTTATGTA CATAGTTGCGATTGATATCAATCTCAAATGAGTTGCGATGAATACCTACTCTTTAAAAGACGATGCCTAG GTCTCGTAATCCAGTTCAATTTATGTTGGTTTCAGGCCATGGTATTTTATGGGGTCATTCAAAAATGTAA AGTCTGAATGATATCCATATAATGTTAGTGGCAGAGTGTATAATGTAGACAGGATATTGATAAAAATCGA TGAAATTGAGGAAATACCCATCAGAAGTAGTGTATATCATAGTAATTCAATGTGTTTTGATGCATACAAA ACCCCACTATTCAAATTGTGATGCACAAATCATTTTTATAGGTACCTTTCCTTGGGGGGGTGTTTCTCAA AGATCCAAAGTTGGACTTATATCTAAGTTGGACTTAACAATTATGGAAAGCCGTTAGCATCTTTGTTGAT TCAAATTATTTGTATTTTCTATTATCAAGGAGATTTCATGTTCTTGATGTGGAATTTATGAAAAGTCTAA AATACTTGAAATTTCGCTTTTGAATATATTTTATTTTAAGGCTACAAATGGCTCTCCATAATGTTTAAGT CCAACTTAGAGTTAAGTTCGACTTAGAATCTTTGTGAAACACCCCCCCTGGAAGAACAGAGACCCATGTT GATCATGGAGATTCTCTTTTCTTCAGGTCAAGAGTACAAACAAAGTTAGTCTTGTAGATGGAATATTTTT GTATTCATAGCAGAGATATGTATGTAGAGATCATATCAGAGACAATATGAGATTTATCTCCATAATAATT CAATATATCAAATAGGGTATTTATCAGTGAGTATCTTATTGGCTGAAAAGGTGTCACATGACACTTAACA ATTTGTTATATGTGCATGAACGCGCAAAATTACTTTTTTTTGCATGGTAAAACGAGTACAAAAGTGAATA CGACTGCCTATCTCACTTCCCTCTCCTTACCCAATTTATGCATCGTCTTAGCTGCGCGCGTTTGGGGTTG ACGTTAAGGCAAGTAATCGAGAGAGATGGACTCTCAAAGAGTTTTGTTTATTCTACTGGTTGCTTTATGA CACATAGGGTATTGTTGATCAGTTAGTAAATTAGGTGAAACCTGTATTCAAAGGCCACCTTTAATAGACA GGTGGCCTTTCTAGGCAGGTTCTAAAACACACATTTCATCTCAGAGGGACACATTAAAGGTGTCCCTTTA ATAGAGAGGTGGTCTTTATAGAAAGGTGGCCAATAGAACTAACACCCTCCCGGCTCTATTAAGAGCCGGG AGGGTGTTATCTGTATGTTAATTGATACAAGTTCGAGCTCTTCATGTTTTCAATAGATGACATGTTGACA AAGGGACATATACAATGTACATGTATATACAATGTACACTGTATGAAACCCTTCCTCAATCACTAGAAGT GAGTTTGAAAATATCACATTTTTTAGTGTAGTGTTAATCAGTGAAATGAAATTACTGCCAATTAAATTTG CTTGGGAAACAAAAGTCTGATCATCATTAGTAAGTAGTGAAGAAGTTCTTTCAATATAATTATCCCAACG TAGGTATAGTTTGTCATGCACAGGAGATCATTCATGATATATTATTATCATTATTTTTATTTGACATCTA AACAAATCGTGTTTGATCAATTGATTCAGCATTAGGTGAAGTGAGGATGCTTGCAGAAAAGCTATACATA TTTTTTATTCAGGTATTTGGTATTGGTTTGAGACAGGTCCGGTGCCAGCGACAGGGCACTTGTATATTGA TGTGCATATTATATTTTATACAAACTACTGCAGAATGATAATGAACACCTCCTGTATACTTTGTACATAT GTAAGATATCGACTGAATTCCAGAAGAAATAAACAAGATTGAGATTCCAGATGTTAATATGCACTCATTT CAAATGTGTGCTGTAATTGTTGTATGAGGAGTGTACAGAAAGTGTGTGTTTTGGTGATTAATTGCATGCG TAGCTAAAATACATGCTATGAACTAGTGTAGTGGTTACTGAGGGGAGTAGAAATCTGAAAATGTGTATGA CTGCTTAATGGCTGGTATTCAATGACATGATGATATTCTCCTTTTGTTATATATCTGTTAAAGTAATCCT CCAGAATTAATTATTTAATGCCCAATGTTCGCCTAGGACAGGCTAATTTCACCCTTTTTTGGACCAAAAA CCTACAGAAACTAATTGTGAGAGCTGATGAATATAATAATAAAAATAATAATAATTGCACAAAATAATAC AAAGGAAATTCTCAGCATTCTCTGTGTTTGGGACTAAAGAGGATGTTTGACCGTGTTCTGTAATAGTTTT TTTTAAAATCATCCTTAGTTACTTTTACGATTCTTAACGATTAATCTACAGAGTGCTGGGTTATTTGTTT TAGCTGTGTTTTGTTTTTATATTATTACCTTTCTCGTTGATATGTCCCCCTCAAAGAGTAGGGTTCATTT CAGGCATTTCTTTTAAATCATTGATCGCTGTTGACCAACCCACTATGTTGCACAACCCCACCTAATTTAA TGACAACATGAAGGTTTAAATCATGGTATTTGTTTGTGGTAGAAATAGACTTTACAATACACGATCACGT CGAAAAAAAGAAAAAAAATATTAACTTTATAACAATCTTTTTGAGGATATCATTTTTTAAATATTTTCAT TTTGTGACTTTCTAATTCTTTTTAATTCCTAAAGGCTGAACATTGCTTCATTATAATGTATAGATTTGTA TGAATTTGCAGCTTCTTTCTCCCTCACATTACTACTTTTTATATTGGTAGTCGACACAGTCTTTTCAATA TTATCAATTTTTCTTCAATTAAGGTTTATAGGTGTTAGTTTGAAGTACAGAGTAATATCATAATTTAAAT TATGAACATCATTCGAGTAGTGGATTATGATAGGAACCTACACTTTTGCAATTGAAGGAAATTATGCTCT TTCATTACATTGCTAGTATGTTACATAGTTAGACAAACACAGCTTTGATACAGTTGATGTAACCTCGATT GGTTTTGCTAAGCTTAATATCAACACAAAGATAATCATGCAGCTATTATTACACGTCCATCTAGAATAAT GTACATATCATGTTTTACTCAGTGTAACTTTACAGTGTTAGATAAAAAAAACCTGTATGACCTTTAACCT TCAACAGGCACTTCTTCTTTTACCATATATACCTGTAGGTATATCAACATTTGATATTACAACCAAGGAA CTTTTCTGTAATTAGTTAAATAATATCCTAATTTGCCTTTGAAAAGGTTGATTAAAATATGTGTGCAAGA GAAGAATGTACATCTATTCTTTACAAATGTAGTGTTCATGTAGCTGGCCAATTTGATTATAATTTGCCTG TTCACCAGATGTAGGACTTTTGTGTCATTTTATGGAGCATGTAGTTTGGACATGTACGGTAAGAAGAAAT ACAGCAGGCATTCATGTCTCTGTAACATTGCTTGCTGTAAAGTGTTAATAATGGAAATTGCCAGTACAGC ACTATCGGTTCGGTTGAAGCTCACTTGCATGTATTGTAAATGGACGTCTCCAACACTGTTATTATTTTGT GGATGTGATGATTTTATGAGATAATTTTTTTTAAATTTCTTAATTGTTGTGTGATTTTAGAGTTTGTTTT CTGTTATTATTGAGAAGAGATCTATATTTTCTATTCATTTTATTAAATGCATTTGAAATCCATTGATTAT GTACATGTATATGACTTGATATCAATCCTTTGTTTTGCAATTCTTTGTCTAATTTTAATAAAACATCTCT GACATTGAAGATTGATTTGTTTGTCACTTTTGTCGGTCAACAGCGTAATAGATTTTGCACCAGCAGCAAG GACTTGAAAGGAGAAAGACGTAAAAAAGCAGAGTTAGGGACAACGGACAGATTTTAGAGGTGGGAAGTTA AAG
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds