Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030979592.1 PREDICTED: Strongylocentrotus purpuratus forkhead-associated domain-containing protein 1 (LOC575530), mRNA TCCCCCTAGAAACGCACATACACAAGCTGTACAATCAAATCGCGTTGTTATGTTCCCATCAATCGATTGA TCTAATAATGGAACAAGTGAAGTGAACGAAAAAAAAACCTAAGAGGATTGGTTTACTGGAATATACACAT CGAGAATCATACTACGTTCATTTTCCGTCAACTAGACAGACCCATTTTCCTGATGATACTCACCGAGTCT GTTGTTCTCTAGACCTTTGCTATCATTGTCTGCAACAAAACTTTGAGATATGGTGAAAGGTTTCCTGCGG AGTCCCGAGGGGCTCTTTCAGTTATCACCGAGCGTCACATTAGTCGGACGAGAGAATTGTGACTTAAACA TCCAGCTATCGTCAATAGAATTACAGCACGCTGTTATTGAGTACAGTGATTCAGAAAGCTGTTTCGTGAT CCAGGACCTGAACACTGCGCATGGAACGTACGTCAACGACTGCCGCGTTCAGAACGCTGCCGTGAGGTTG GCTCCGGGAGACAGCATCAGGTTCGGCTACACAGGATTCCCGCATGAATTGGAGGTGGAAGATGACCAGG TATCTTACCCACCTGTTGGTAATAGGGGTGGAGCCAGGATGATGCAAGAGAGTGCACCCCTCAACGACTA TTCCCAGGCCCAGCTCCCATACCTCAACAACCATGCAGGGGGCGACGCCCCTTACGGCCAACCCCAACAG TCCACCCTCCCTTCCCTGGGAGGGGGCTCATCAGCTGCCCCACCCCCAGCAGTATGGGGGACCCCGCCCA CAGGTGTCAGTGGGGGTGGGGTGATACCGAGACCCCCCAGAGCCAGGCCGACGAGCGCGGGTAACAGGAG GGGGAGCGGAAGTGGACCAGGGACTGGGAGCGGGGTCCATATCGCTAGTCAGAGCCCTACAAACAGCCCC CTCCCACCAAGACGAGCCGTGACGGGAGGATGGGTCGGTTCAAGTGGAGCTCGAGGTGTAACGTCCACTC AGCAGGTCAATGGCAGCCCTAACACCAGAGCTTCACCGGTCAATGACATGTTGGCTGCTCATGAAAAGGA CCAGAGACTGCTCCGAATGGGTGACGAACTCAACCGACTGGCCGTCTTCGAGGCCGAGTCCCAGCGGAAG GACGGGGTCATCGGTCAGCTGCGGTCAGACATGGAATCCTTGGCCATGCAGTCACACCAGGCCCAGCAGC AGCAGAAACCTCCGCCGGTAGCCGATACCACGGTCCAGAAGAGACTCAAGGAGCTGGAGAAAGATGTCAA TCTGAAGCAGCTTGAGGTCAATGCACTGAAGGAAAAGATGTCCAAGATGAGGATGGAGAGCACCGATCCC ATGGAGAACATCGCCCACCTGCGCTCCCTGCTCCACCAGCGGGAGCGGGAGCTGGTCTCCCTGCGCCAGG AGGTGGACAAGATCCGCAAGGAGAAGGGCACCAGCTCCGCCCTCATGACCAAGCTCCAGCGGGACCTCAC CACCAAGGAGGGCAGCATCTCCAGGATGAGGGGCGAGGTGGAGCTCCTCAAGAAGGAGCTGAGGGAAAAG GAGGTGGCCATCTCGGCGCTGGCTGCCAAGTTCTCCCGCATGAGGGAGACCAAGAAGCACGAGGAGGAGC TGGCGGCCAGGAACAAGGAGGTGGTCACACTCAAACACAAATTGAAAGGTGCCGAGAGCAAAGTGGAGGC ACTCACGAAACAGACGGCTGAACAGAAAGAGGAGATTGATAAGTTAACAGCTCAAGTTGAAGAGGAAACA AAGACAAAACAGAGGTTTAAAGATGAGAAGGAAGACATGAAGAAGAAATTCCTGGAGTCTCAGAGATTAG AGAAGCAAGCCAGAGTAGACATCGACCAAGCCAAGAAACAGCTGGAGCGCTTCAGACAAAGGGTCATGCA GACGACTTTCTCGGCTCCGGGATTCCGTGTGCCTGACGACGAATCGACCGTCACGGACGACAGCCTCTTG GAGACGATGACCAAGCTCATCACGGAACGCAACGAGGCGAAAAACAAGTTGCGAGAACTCAAAGACACCA TGAAGGGTCTGGAGACCTCGAGCAAGGAGACTAAGTCTAGCCACAAGACACTCAAGCAACATCTGATAGC TGCAGAGAAACGTCTTGAAGAAGGAGGCAGAACGTGCTCCCACATCCGTAACGAGATCAAGCTCCTCCAG TCGGTCACCGTAGATGAATCCTTACAGAACATCAAAGATACCATCGCTATGATGCTCCAGAATGAGTTGG CATGGCAACAGTCGTTTGAGACCACCCTGGAGAAGTGTGGCTTTGACATCAAGACTGGTGGCAAAGATCT TCAAGCCCACATCGATAAACTGAGAGACCAGGCTAACAAGGAGAAGAAACTGAAGGAGGAGATTCAGATG AGCGTCGACACCATGTCATCGGGGGTCAGGTCAGAGATGGAGAGGAAGCTGGAGAGACAGAAGACGGAGC ACGAAGAGACGATGAAGTTTACCATGGAAAGAGTTAAATTAGAAAGTGTCAAAGAAATGCAAACGGCCGT TGAAGAAGCAAGACAATCTGAGAAGACGAGATTGGAGGAGACTTTACAGTCGGAGAGACAGAAGGTACAA CACCAGGAGCAGAGCCTGGAGCAGCTAAGACAGGCTCTGACAGAAAGGGGTACAGATGATGAGAAATACG TCACCATGGAGAAAAGTCTGAAATTACAAATCGAAGAACTCCAGAAGGAAGAGAGCAAGCTGAGGGAGGA ACTCAGTCTCCACCAGGAGCAGCACAAGAGCTCCGCCTTGAAGGTCGAAGGTCAGGTGACGGAGATGCTG GAGTCCCACGAGAAGCAGGCGGCCGGGTTCAAGGAGCAGATCCGCCAGCACGCCCTGACCATCGTCTCCT TGGAGGAGAAGGCTAAGAAGACACAGAAGGAGCATCAGGCCTCCAGGAAGGAGGCCAAGGAGCTGGAGAA GAAACTTGAAGTTCAAACCAAGCAAGTGGAGGAGGAATTGAAGAGAATCAAGGCTTCTTCCCCGGCCAAG CCTGTCATCGTAACTCAACCATCTGCTGAGGTACCGGCCCTTCAACACGCCATCAACCTGATCAAGAGGG AGAACGGCCAGCTGAAGAAGGAGATGCAGGACCAGCAGGACGTAGTCTTGGGTCTCAGGAGAGACTTGGC CGGAGCCTCGGCCAGACTTTCAGACATGACAGGAGAGCTGAGTGACCGTCAGAAGGAGGAGATGGAGAAC CAGAAGGCTCTCATCAAGGACCAAGAAGCTGAACTGACCACTCAGAGACAGCAGCTGGTCAAGCTGTCCG AGCTGGTGGACAGGAAGGGGATCGAGGCGGAGAACATGGTCAAGGAGATTGCTGCACAGAAAGAACTGCT GCTGAGACAGAAGAAGGACACCGCAATCAAGGACTCTGAGCTGAACAGATTGGAGCAGAACCTCAAGCAG GAGCAAGTTCAATCCCAGAAGGCCAAGCAGGAAGTCGAACAGGAGGGTTTGATCACAAGCGAGTTGTCAA CCACAGGGGCACAGTGCAGAGGAGAGAGACACGCTGAGGTTATCTCTAGGCAACGAGAAGCTCTCGGAGA GCTGAGAGGGAGGATAAAAGGCATGGAGCAGAACAGACCCCCATTACCCACTCAAGACCAGGCCTTACAG CAGGTCATCCTCCTCAAGAAAGAGCTAGCCGAGATGAGGGCCAAGCAAGCCCAGATCTCTGCCATGTCAG GCCAGTCCTCCTCCCCCGACGTCCTGCTTGAACGTGAGGTCGCCAAGGCCAGAGGTCAAATCTCGACCTC CGTCTCGGATGCAGCCATCGAGAGAAGCGCCAGAGTCGAGATCCAACAATCCATGGATAAGAGCGAAACA GCTTACATGGAGCTATCCGGGACGGTCGCCCGACTGCTGGGGCTGGGTGAGATCCCCGGCCAGGAATCAC TGGCCCACTTGCCCCGTGACGAGAAGGAACGCATCATCAAGGAGAGGGGCAGCAGCCACGAGCTCATATT GAGTCGGCTGAAGACGCTCAACCAGCGTCTGGAACGCAAGGACGCTCTCCTACAGGGCTACGAGAAGGAC CTTGAGAAGCTGCGATTGGCCGAGAGGGTAGCCAATGAGAAGGCAGGCCAGGTGGAGAGTTTGGCGGGTG ATGTTAGGAGTCGCCAGGAGGAGTCACACTACCTGAGAGAGACTCTGAGGAGAACGAGAGAAGAACTAGA TAAAGAGAGGAGACTCAATAGTGCAATCAAGAGTAAAAAGACATTCCATCTTGAGAATGATGAGAAGAAC AAGCAAGTGTGGCCCAAACACAAGTGCTATGAAGATGATGCCAAGACGAATAAGAAGGAGGGAAAGAAGA AGCTGCAACAGGAGAAGTTTATACGCAAGGAATACGAAATAGAAACACTGAAGGCGGAACTAGAAGCCAA GGATCAAAAGCTATGTGAGACCACAGCTAGACTCATCAACATGGAAAATGCTGCTATGTCATGATTCCTT TGCTCCAAAAAATCTACGTCTGGTTAGCTATCCTCCAGGTCAATGTCCCTTCCACCTTTCTTTCACATGA GAACAGAGTAATCGCATCAAAAAGGTCAAAGGTCAAAGTCCAGATATCATCAAAGGGAAGAAAGGATGTG TCATCCTGCATATGATGTTACATTAATGATGATAGTAATGATAAATCTGGATTTATACAGTGTTTAGTAC CGAAAAGCGTCTCTAAGCGCTTTACAGATATTATTATTACCCCAATCTTAATAGAATGTGTTTAAAAACA AGAAAGCAAAAGAGATTTGTTAAATGCCAGATGGCAGCGTAACTCAATTTTGTATTCATTTAAGAGCGTG TACTGCTAGTTTGTAAATCACTACATCACCTTGATCTAGATGTAAATGAAATGTAAAAGTTGAGCAACAT TTGACTTTGACTTGTACTATTTAATAATAGATGTGTAGTTCATATTCATTATTCTTGTCCTGAATCAGGC CATGATTTTTTTCTTTCAAATTTAACCTAAATGTAATTTTCCAGTTCTTGTAAAATGAATGTCTTTTATA TTTTACAATTAAAACTTCTAAATGAAGCCGTCTTGAATAAAAATGTAAAATTGAAGGTATGGACAACATG CATTGGGAAGGTAGTAAAAGAAATGATGAATAATTTATAAACATTTGAAAATCAAAATTTGAAACTAGGA GAGCCCATAGCATATGAGAATGATCGATTTTATTGCTAAAATTCAAGTAATTGTAAAAATAAGTTTGGGA TGTAATGCATTCCGGTACTCATTTAAGATTTTGTACAGTTAGTGCGGAAGCATCTATTTTCGGGCATTAT CTAAATAGCAAACAAGGTCTTGGTAGCTGTGTGATGTGTCGATTGTTTCAAAATTTCTTCACAGTTTGTC TCAATTGTAATGAAACAGGTATAGTTTTGAATTTTGTTCTGATGAATTACATGATTGATTTGCAAGTTGT AAAATACTTAATGTTTTTTGCCTTGTTAAAGAGATTCATTTCCAATCTTGAAATCAAAATGACTACTCTC GTGGTTGGATTTTTCGTGTCAGCAGAAATGTTAATATTGGTTAATATCTTTGAATACATGTTCAATGTTG GAAGAGGGTAGCGTTTACATTTTTAGGTGTATTCTAGTTCATTCTAGGCTATTGGAAGTGTTTAATAGAA GGTGTCTAAATGGAACTGAGGCTTTGTGTGAAATCTGAATCACATTTTGTATATGACTGTACAAGTATAA GGATGGGGTTGGATTGTCACTATTGATTTTGAGTTTTGTAACAAGCCTGAGGTTTTATGTATGATCATGT CTGAGCAGAATTAAAATGAATGACTCGTCTCTGGTGGTGCATGGTTGCTATTTTACCTGACTGCTGAGAA AGCATAAATGCTTGAAAGTAAGCAACCAGACGGTCGACGGCTTAAGGTCCTCTCTGAGGGACCTGGTAAT GAGGATTAATGCCTTACCAAAGGGCACTAGCGCATCGCCTTGGTTTCGAACCCGGGTCACCGGATTACGA GACCACTGCTCTACCGACTGAGCTATCGCGCATCCATATCTGCAAGATATGAATTTTAATTCATGAGAAC CGTAATGAAATTATTGACCTCATAGACATGTACCTGCTCTATTCATACGAGACATACAAATCTCTTCCTA CCGCTTAACGGCATGCGCTTTCATACTAGTAGCGATCTGTAAAGCCCTTAAATCAAGCAACATTTGCAGT GAAGCTAGCATTAAATACTTGGCAAAATACACACAAGACATTATTTCATTTATTCGTAAATTCATAAATT GCTGGTTTTTAGAGTTGTTAATTTTTACGTGATTAATCATGTACATTGTGTTCAATTACTGTTGATACTA TACTTGAAATGACTTGATAAGATCAAATGAAATATTTCTGTATTCTATATTTTTAATGATACCTGTACAT ATGTAACTCAAACTATGGTATATGCCAATATCGTGTATTATGAAAAGATAAATAAGATGGATATGATTTC ATATTGGTTTGGTCTATCATAACTCTGTTTCACCATCAACCACACTTTGCTGTTTTTCAAAAAAAAATTG AGCCCGCAACATCAAAAAGCAATACTCACACAGAAGATTTAGTGATATTCTTTCAAGTTTTCCTGAGTAT ATTATAATATCTTCTGCATGAATAGAAAAAGACTAAAGAATTTTCCTAAAAACTCTTTTTTTTAAAAGAA TCTCCCTTTAGTATAGCACATTTTGATACCACTGAGACTTAATTTTTTTTTTTATGTTTTGCACCTTTTT ATTAAAATGACTGCAAGTAGAATTTATTAAAATAGTAACAATAATTGCCAAATATGATTTTTGAATATTT TTTTAAAAAGAAGCAGTTAGTATTCAAAGAATAAAATAAATTGTGTCCCGAAATGTTCAAATGTATAAAG AAAAATGTAAATATATTAAATACATATATTGATGAAACAGTAGTATTGTATCTCATTATGTTGAGTAAAT TGTTAAATAATTCTAAAAAAGTGTTAGATTTAAAATTGTAGATAGTTGGTATATATCGTACATTGCATTG TCTCGAGTGTAGTGTAATTTTTGTTGATGTAAATGTATATTTTTCAGCAAATGAAAGATCATGTCTCGTG AGTGAATATATTGTTATATTGGTACATTCTTGCAAAATTATGATGTGAAAAATATATATATTAAAATCAG AATGAGATTGTA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds