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BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database
Database
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
FASTA query sequence
>XM_038199386.1 PREDICTED: Patiria miniata kappa-type opioid receptor-like (LOC119727499), mRNA TGCTGCGCTCACTGCATCGCGTTCGTCGTAGGAAGATAGCACCGAGTTAGTATATTAGGGCGTATATCAG CGCTGTGTTCCGAGATATGAGCCCAGAACGTTAACGGACGCTGAAGCATATTACTATTCTTGATTTTCCC CGAGTGAGTTAAGGTCAACAACGCAAGGATGAGTTGGAATATGAATGATACGGATGCTGTCTGTTCGCAA ACTTTTCTTGTGGTAAAAAATGCCACTGATTTGTTGAGCTATACGCCAGCTGCCCAAACAACCATTACAG TAATACTGCCTATTTTACTGGTATTTGGTGTACTGAACAACATCGCCTTTCTCTTTGTTGTATTCCGAGT ACGTGGCATGAAAACGGTGACCAATGCCTGTCTAGCTAATTTGGCTGTTGCCGATATCATCTTTTTGGTA ACAGCAATAGGACAGCGTCTATACGTGTACTGTAAGTCGCCTATCTACGCTGATGCTGCACCGATAGGGC TGATTGGTTGTGAGTTAGGAAACCTCACCAAAAGTACCACTTACCTGGCTGCCTTGTGTTCCGTCACGCT GGTGTCTATGGAACGCTACGAGGGAGTATGTCATCCCCAGAGAAGCCACAATCGAACGGGAGAGAAAACC TATCGCTGGCTGCTGTTGGCATCATGGTTCGGAGCCCTAATGGTGTCGGCAACCTTTATACCAAGCTACC TAAGATATGAAACAGTCTGCATGATATGGCCCGAGGAATATAGTCACTGGCCCAACACTTGGAGCTCGTG TCTTCCGATTGAGAAATGGTGGACCATTTACAAACACGTTGCACAAACTATACCGTTCATCGTGTCTTTG TTCATCAACGTGGCTCTGTACGTGAACATAGTGCGCGGCCTTAACGCGTCCGTCAGACGCGCGCGTCTGA CCAGCATCAAGGACAAAAACGTCAAACTGCGCAACCAGATTGCGTGGATGCTGATTGTCAATGGCCTTGT CTTCTTTGTTTTGCTTGGTCCGTACGAAATCTTGTCGTTGGTCAAAGCTACGGTGCCCATCGGTTCAACT GGTTCAACTGCCGTCTTAGAGGAGCTCTTCAAGTGCTTGTCTTACGTCAATTCAGCCATCAACCCAGTGA TTTACATTTCGATGAGCAGCAGATATCGAGCCGCCTTCGGGCTTGTGTTCATCCCGCCTTTTGGTAAGAA CAAGTTCCGTAAGGCTAACAATGCTTCGCAGAATAGCGCCATATCCAGCCTGCTTGACATCTGCAGGGAT TCTCAGGTTTGAGTCGCACACCATCGACATGGGATCATGGACAAATCCTCTCCGTTTCGCCAAGACATGA ACGACAGACTCTTTACTCTGTAAAACTCACATTCAAAAGTGTTTGTGGAAATTGGATCTCTGGGATTCCG CAAAAGCATGGCTTCGGGTCATGTACTTAGTATTAACTTTCTCTTGTTGTGCCTCAATAAGAGTGTGAGG ATTCGTCGAGAGCGTGGTTTGTGGATCTGAAAGAATTTCAGGAGCTCTTTATCCCGCCAAGGTAAGTTAA TCTGATGCGAAGACTTCACCAGAGTCAGGTAAACTACTGACTCGTGGAAAGAGGTCATCATGATGGCTTT GATATCCTCTTCTGGGACGTCACCTGATACATCAGCTCAGTTTACCTTTTATATTAAACAGCTCCCAATC ACTTCAGAACTCCTACGCCCATGAGCAGACACCTTCTGTTTTCTACTCCCACCTCCGAAGACAGCGGATT TGATTTTGTAACCACACTTTGATAAACTGCTCCAACCATATCCTCAAAACACTATGATTACGGACGCAAA ACGGCGTAATGAACTGACGCTACCTGGGACAGCAAGAAATCGGCGAATTAGAAACTCTTTGACCAAACAC AGAAATCGAATTGAATTTGTTAAACTATCACCCTGTTATCTTGTATGTGACGACACCCAAAATTGTTAAT TAAGAATATACAAATGTATTCGAGTTAAAACACACAATATTCGTGTAATAGTTCAGTCACACGCACAATC ACCTCTAATTTAAAATGCATGTGTACATATCTAAATTTATAGAATCCTTTCGCTGCAATCCAGCCGAAAA GTGTTTGGGTTTGAGGGGAAAAAGAGTTTATATTGTTATCATTCTCCACCCTGTACGTTGTATATAAATT GTTTCATGGTATGTTTAACAATATTTCTAAATACACCTCCAGAATTTTTTTAAGAGATTGATTTGAATTT GATAGTGAATATTGGCATTACGCTTGCGACTTGCATTTTGGCTGCAACGTGTATGTCCCCAATTAAGATG CCTTAATCATTTTATACATGTCAGAAATAACATTTTGTCGTAACACGAGTTCTTTAAAACAAATATATAC ATGTACATATCCAATACGAGATACCAACAGAATGTCGAATCAATGTTAGATATTGGGATTGCTAGATTAA ATTCAGCATATTTCGTTCAGGGAAATGCTAAATTTTTCAAGTGTTTGCGGTCCCTCAATATCGCAATCTT TTATACCGAAAATAATTCTCAACCCCAAAATGTGCAGGGATAGAAACATTCAGAATGTACCGTAACCCGT ACAATTTGGAGATGGGGTATATATATATATATAATTGTATTATGTGTATTATTTCACAAGGAACAAACAA ACGTATGAAAAATATAAATATTGATAAAAAAAAATTGCAGAACTGTTTCGAAAATAATATTTGCAAAAAA AAATTCAGTTGTAGTGTTGTATCGGTTATTAAAATCAGTCAGGTTTTTATCGTTCTTATCACTCATCGGT ATTCTTGCATTGCAATGAAAGACATACCAGTAACGTTGTATATAAATCAATCTGTGGATATGAAGACACA GATTTGTTTTAAGAACCTTGCTGTTGTTCTTGCACAGTAAAAGACGAGTAATAATCCCATCTATATGATT GCAAAGAGTGGCGTTTTGTAGTGCAAAGTTATGATGCTCAAATATCAACAAGTTGACGAAGTTTGACATG GATACTTCACTTTTTATAATCGCAAAGATCAGAGAATGGATTGACTTAATTGAAGTGTTATATGAAATGA TACCATGATTACCACTCTGATCAAGACCAAACTTACATATTTTATTTCAGTGTTCCGTTTTAACAGGGGC CAAGTAATAGTCTCCAGGTGTATATATTTAAACATTTCCAGTTTGTATCATAAGCACCGGTCAATATAGT GCCTTTAATGCAGGTCGTATCAAGTGACTACATGGGCGTAAATCCCGGGTGGGGTGAGGAGGATATATCC CCACACTGTTTGACCGGGGGGCATTGGATCACTCCCCCAGATTGTTTATGGTGGGAAACAAAATATGCTG AATTTGACGTTATTTTTCAGCTTTCCAACGGTCCCATTTTTTTTAAAGAATTTTGAAAAAACGGAGATCA AACAGTACAAAAGCTTGCACTGTTTGCATGTACGGTTATGCACGCAACATGTACATTTGTATCATGAACA GCGCTCCTAGTGTCCCCCCCCCCCTCTTTTTTTTTTTCCACGGCCGGGCAATTTTCTGATTTTTCCGTAT GGTCATCCCCAATCCCCCACCCACTCGATGGCCAACACGGATTTACGCCACTGCGTGACGCTTCCAGTAA AATGAATGGGACCTACATCTTTGCTATGACCAAAAACGTGCACGAATATCTGAAAGTAAAAAAAACTGAA GCCAATTTATTCGTTATATCATTTGATATTTAACGGCCATTGTGTATTTTTTTTTGGCCGTTGGGTGGAA CATGCAGCTTACGATAACATGTCCAATTGTTGCAGCCAAGAGATAAGATAATGTTTTCTCGTGTTTTGGA CTTTTATGTGGGGCCAGAACTTACATTTCTTGTCCTTAGGCCAAATAAATATTAAAAAAAAACAGGTTTA GCGTCCACGCCCGCTTCCTTTTTGGAGGCCGCCTACTTTGTTTTTATGCGTTAAACCGAAAAAATGATAT ATATTAAACAGTGACATCATTTTGGCCTCTTTGTCTGCTACATCTAGCCTATGTAAAGCTGGTATGTTAT TTCCTGAGTCCAGGTGGAGGCAATTTAAAAAAGAAAATGGCGGTCATTTTGAATAATAGCCCGGCCGGTC GTTTTTGAAGAAAA
Load query from file:
Options
E value
0.1 (Default)
10
1
0.001
1e-5
1e-25
1e-50
1e-100
Number of alignments
25
1
5
50
100
Word size
Default
2
3
4
5
6
7
8
9
10
11
12
13
14
15
Default = 11 for blastn, 3 for all others.
Matrix
BLOSUM62 (Default)
BLOSUM45
BLOSUM80
PAM30
PAM70
Gapped alignment
True
False
Automatically set to False for sequences longer than 4500 bytes
Filtering
On
Off
BLAST time is limited to 30 seconds
