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BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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Blast program
blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database
Database
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
FASTA query sequence
>XM_038188315.1 PREDICTED: Patiria miniata serine/threonine-protein kinase mTOR-like (LOC119718889), mRNA TTTATTAAAGATGGCGACTTCCACGGTCAGAGAGGTTCCGCCGTTTTTGTCATTTGTTTTCTAAAGTTTC CTTGCATTTTAATCGTTAGTTCCGTGAAGCAATGTATCAGAAGCAGTAGTTCAGCTACCCTTTTATTCGC GGAAAGATGATTGACCAGTTTGTCAGCGGCCTGAAAAGCCGCAGTGAGGAGAGGAGGACCAGGACGGCCA AGGCCCTGCAGCACTATGTCACCACCGAGCTACGGGAGGTGTCGCAGGACGAGAGGACCTCGTTCATGGA CGAGCTGAATCATCACATCTTTGAGCTGGTGTCCAGTCAGGACGTGAACGAGAAGAAGGGTGGCATCATG GCAATCGTGAGCCTGATCAGCATTGACAGCGACAACGCCCACCGCATCACCCGCTTTGCCAACTACCTGC GCACCTTGCTGCCGTCCAGCGACGTGGCGGTCATGGAGATGGCCGCTAAAGCCATCGGCCGGCTGGCCAT GGCCGGCGGGACCTTCACGCCGGAGTACGTGGAGTTTGAGGTCCGCAGGGCGCTGGAGTGGCTAGGGGGA GACAGGAACGAGGGGCGCAGACACGCTGCCGTGCTTGTCTTGCGTGAGCTTGCTGAGAACACCCCGACAT TTTTCTTCCAGCAAGTGCAAAGCTTCTTTGACCACATCTTTAATGCGATCAGGGATCCAAAGCAAGCCAT ACGGGAGGCAGCCGTAGCCGCTCTAAGGGCTTGCCTGGAACTGACCTCACAACGCGAGACTAAAGAAATG CAGAAGCCACAGTGGTACAAGCAAACCTACTTAGAAGCAGAGAAAGGTTTTGAGGAGGTGACGTCCAAAG AGAAGGGCCTGAATCGCGACGACCGTGTCCACGGTTCGCTGCTCATCATCAATGAACTCATCCGGAACAG CAGCATGGAGGGAGAGCGTCTTCGTCGAGAAATGGAGGATGTTTCTCAGGAACAATCTCAACATGAACAC AGCTTTAAGCCACCTACTCCGGAGCATTGGTACCGGCGTAATCGCAATCGTTTCCTGCGATTGCCTAAGG AGTTCCACAGTACCAGCCTCAAGTCTCGCCTCAGCATCCTGTCCTCGGGCGTCGGCCAGGGCCTGCAGCA CTCACAGCGCTCCTCGGTCACCGGCGCCCTGTCCTCCCTGGTCTCCCCCAGCCTGCAGCCCAAGCCCCGG TTCGTGGAGAGCCGCTTCTGCCGTGAGCTCATGGAATCTAAGTTTGACGAGGTTTGTCAACAGGTACTGA AGTACCGTAACAGTCGTAGTCCCCTCATACAGCAGACACTGCTGACTCTCATACCAAGACTGGCCGCCTT CCAACCTGCCAGATTTGTCAGTCTATACTTGGATGATTCGGTTCAGCATCTCTTGAATAGTTTGAGAAAG GAGCGAGAGCGTTCCAGTGCCTTCCAGGCCGTGGGTCTGTTGTCTGTTGCTGTCAAGCATGAGATCATGC CGCATCTGCAGAACATCCTAGTCATAGTCAAGGCCTCTCTGCCACACAAGGACTACCACAGCAAGAAGCA CAAGACGAGCCCAGTAGACCCCTCTGTCTTCACCTGTATCAGCATGCTGGCCAGGGCCGTGGGTAACAAC ATCTACGGTGACGTCAAAGACATCTTGGAACCTATGCTGGCTGTTGGGCTCAGCCCCGCCCTGACGGCCT CCCTGCATGACCTAGCCCAGCAGATCCCCCGCCTCAAGAAGGACATCCAGGATGGCCTCCTCAAGATGCT GTCCCTGGTGCTGATGAACAAACCCCTCAAGCATCCCGGCACGCCCAAGGGCCTCATGTCTCCAGTATCC CCTGCCGGTTCCAGCCAAGGAGCCAGCGAGTTTGGCGACATCACCAGCACGGTGCTGGCCCTGCAGACCC TGGGCAGCTTTGACTTTGAGGGCCACTCCCTGACCCAATTCGTCCGTCACTGCGCTGACCACTTCCTGTC CAGCGAGCACAAGGAAATCCGGGCCAAGGCCGCCAGGACTTGCGCTCAGCTCCTGCAACCATCGATCAAC CTTCGTTCCAACCGACCCCACCCAGTCAGCACTACTAACATCCAGGTGGTAGCTGACGTGCTCAGCAAGC TTCTAGTAGTTGCCATCACAGACTCAGATCCCGACATTCGCTACTGCGTGTTAGCTTCCCTGGATGATCG CTTCGACGGCCACCTGGCCCAGGCAGAGAACCTTAGCGCGCTGTTTGTGGCCCTCCATGACGAGGTGTTT GAGATCCGGGAGCTGGCCATGTGCACCATCGGCAGACTCAGCAATCTCAACCCGGCCTTCGTCATGCCAT CCTTGAGAAAGACTCTAATACAGATTCTGACCGAGTTGGAGCACAGCGGTGTGGGTCGTAACAAGGAACA GAGTGCCAGGATGCTGGCTCATCTGGTGTCTAACGCACCCCGCCTCATCAGACCCTACATGGAACCAATA CTCAAGGCGTTGATTCCCAAGCTGAAGGAGGCCGACCCCAACCCCAGCGTTGTCATCAACGTCCTGGCAG CCATTGGAGAACAGGCTCAAGTGAGTGGTACGGAGATGAGAAAATGGATGGACGAGCTTTGCCCAATCAT TCTGGACATGCTACAAGACTCGGCGTCACTCCGCAAGAGAGAGGTTGCTCTCTGGACCCTGGGCCAGCTA GTGGAAAGCACAGGCTCGGTGGTGGATCCTTACAAGAAGTACTCCAACCTCCTGGACGTGCTTCTCAACT TCCTCAAGACGGAGCAGTCGGCTAACATCCGCAGAGAGACCATCCGAGTTCTGGGCTTACTGGGTGCCTT GGACCCGTACAAACACAAAGTCAACCAGGGCTTTGTGGACAGTCACGGGGAGGGTGGAGCCGCGCTGAGC ATGTCAGATGTCAAGATAGGAACGGAAGGGGAGTACACCGCCAGCGAGATGCTAGTCAACATGGGCAGCG CCACCCTGGAGGAGTTCTACCCGGCCGTCGCCATAGCGACCCTGATGCGCATCATGCGTGACTCCTCATT GGCCAATCACCACACGGGCGTGGTCCAGGGCATCACCTTCATCTTCAAGAGCCTCGGTGTCAAGTGCGTC CAGTTTCTGCCGCAGATCATGCCCACCTACCTGAACGTCATCCGCACCTGTGACGCTGGCATCCGTGAGT TCCTTTTCCAGCAGTTGGGTATCATGATCTGCATCGTCAAGCAGCACATCCGTAACTACCTGGACGACAT CTTTGATCTTGTCCGAGATTTCTGGACAGTGAACAGCCCGCTACAGAACACAGTGATCCTGCTGGTGGAG CAGACTGTGGTGGCCCTGGGCGGTGAATTCAAGCTGTACCTGCCGCGTATCGTGCCTCAGATGCTGCGCG TCTTCATGCACGATAACAGCCAGGGACGCGTTGTCACAACCAAGCTCCTGAATGCTATGCAGAAGTTTGG TGCCAATCTGGATGACTACCTGCATCTGCTACTACCACCGGTGGTCAAACTCTTTGACTCTAATGACATC CCCATGACTGTCAGGAGAACTGCTCTTGAGACCATAGACCTGCTATGCGGCACCTTAGACTTCACGGACT TTGCTTCCCGCATCATCCACCCGTTGGTCCGCACCCTGGACACCACCCCGGAGCTGCGCTCCATCGCCAT GGACACCCTGGAGTCCCTGGTCCTGCAGCTGGGCAAGAAGTACCACATCTTTGTGCCCATGGTCAACAAG GTGCTGGTCAAGCATCGCATCGTCCACCAGAAGTACGAGACCCTGGTGCTCAAGATCATCAAGGGAAACT CCATTGCAGAGGATGAGTTGCTCCTACTGCGCACCAGGGCCAAGAAGGCCAACCAGAAGGACGACGGTAA CGCCGGCATGGAACCTGTCAGTCTCAAGAAACTCCACGTCAAGACTAACAATCTCACCAAGGCATGGGCC GTGACTCGCCGTGTCTCCCGCGATGACTGGGTGGAGTGGCTACGTCGTCTGAGCGTTGAGCTTCTCAAGG AATCGCCCTCCCACGCCCTGAGATCCTGCTGGGCCCTGGCCCAAGCCTACAACACGCTGGCAAGAGATCT ATTCAATGCCGCCTTCGTCTCGTGCTGGTCGGAGCTGACTGAGACGGATCAGGACAGCCTGATTCAGAGC CTGCAGAAGGCCCTGACTTCACAGGACATCCCGGAGATTGTACAGATCCTACTGAATCTTGCCGAGTTCA TGGAGCACTCAGACAAGGGCCCATTACCACTGAACACCATGCTACTCGGTGAGTGTGCCTCTAAGTGCAG AGCCTACGCCAAGGCACTACACTACAAGGAGGAGGAGTTCCACCGAGGACCAAACACTGAAATACTGGAG GCTCTCATCAGCATTAACAACAAGCTACATCAGCCAGAGGCAGCCTATGGAGTCCTGCAATATGCCATGA AGAACTACCGCGCTGAATTGCAAATTCAAGAGACTTGGTACGAGAAGCTCCACGACTGGGACAACGCCCT CCTTGCCTACGAGAAGAAGCAGAAAGAGGACCCAGATGAATTCACACTGACCCTGGGCAGGATGCGCTGC ATGGAGGCTCTCGGAGACTGGCGACAGCTGCATGACTTGGCCTGCGAGCGTTGGCCGATGGTGACAGATG AGGGCCGGCAGGCGATGGCGCGCATGGCCGCGGCGGCTGCCTGGGGCCTAGGCAACTGGGACAGCATGGA GGAGTACGCATGCCTGATACCCAGGGAGTCCTACGATGGAGCCTTCTACCGCGCGGTGCTGGCCGTTCAT CAGGACCACTTTGGACAAGCCCAGCAGTGCATTGACAAGGCGCGTGACATCCTGGACACGGAGCTGACGG CCATGGCCGGGGAGAGCTACGACCGTGCCTACGGCGCCATGGTGTCCGCTCAGATGCTGTCTGAGCTGGA GGAGATCATCCGCTACAAGCTGGTCTCGGAGAGACGGGACATCATCAAACAGATGTGGTGGGACAGACTC CAGGGTTGCCAGCGTAACGTGGAGGATTGGCAGCGGATCATCCAGGTCCGCTCGCTGGTCATCAACCCTC AGGACGACCTCCGGACCTGGCTCAAGTATGCCAGCCTCTGCCGCAAGACTGGACGCATGCAACTCTCCCA CAAGACCCTGGTGATGTTGTTGGGCGTGGACCCTAAGAGCATCCAGGACACGCCATTTGAGGCCCTGGCG ACTGTCAAGCACCCTCGGGTGGTCTTTGCCTACCTGAAGCACATGTGGAAAGAGGACAAACAGACGCAGG CTTTTGAGCAGCTGGGCCACTTTGTGCATTCCACCTTGACCCAGCATATGTCATCAGGGATGGGGTCAAC AGAAGAGACTGAACGCAGGGAGCTACACAAACTCATGGCAAGGTGCTACTTGAAGCTGGGTGAGTGGCAG CAGAGTCTGGAGGGCACCAGCCAGCACACCATTGAGGATAGTCTGGTCTACTTCAGCAAGGCCACTGAGC ATGACAGGGACTGGTATAAGGCATGGCATTCCTGGGCCTTCATGAACTACGAGGCCTGCCTGTACTACAA GCTGCAGTCGGCCACGTCCACCTTGCCCTTACCCCCGCCCCCGGCCACCAGCACGCCCAAGGGCAAGGCG GAGGAAGGCGGGGCCGAGGATGTGGTAGAGCGAGGGGAGGGGCTTGAGGAGACCAAGGAGGAGGAGGTCG TGGAGGAACCGGACACGGAGCCGATTGAGGATAGCGGTACCGAGCAGCAGCTGGTGTCGTCTCAGATGGC CATCCAGAATTACATCCAGAAGTATGCGGTGCCGGCCGTGCAGGGCTTCTTCCGTTCCATCGCGCTGTCC CGCGGCAACTCCCTGCAGGATACGCTGCGTCTCCTGACGCTGTGGTTTGACTACGGCCAGTGCAGCGAGG TGTACGACGCCCTGGTGGAAGGCATCAAGTCCATCCAGATTGACACCTGGCTGCAGGACACCTGTATGCA CTACTAG
Load query from file:
Options
E value
0.1 (Default)
10
1
0.001
1e-5
1e-25
1e-50
1e-100
Number of alignments
25
1
5
50
100
Word size
Default
2
3
4
5
6
7
8
9
10
11
12
13
14
15
Default = 11 for blastn, 3 for all others.
Matrix
BLOSUM62 (Default)
BLOSUM45
BLOSUM80
PAM30
PAM70
Gapped alignment
True
False
Automatically set to False for sequences longer than 4500 bytes
Filtering
On
Off
BLAST time is limited to 30 seconds
