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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>JT109754.1 TSA: Strongylocentrotus purpuratus WHL22.520688.0 mRNA sequence TAGCTGTTGTGATTGAGATTTTTGCACTGAATTCATTTTCCGTATTTTCTATTTTGGTAAAGTAGACAAC ATATTCTGCGCGTGCTGGAAGAAAAAAACAACGATCGAAAATAACAAGCACAGATGAGGATAAAATTAAT GGTAGTAGTCTATGTGAATGCAGATGGTCGATTTTTCTTTGACGAAGACTGGCCTGCCAAGAGTAGTCAC TCCAAGTTGAGCAGTGCAGCGAGTGGCGCCTACGCTACGGACCACAAACCCTTCTAATCGCATCGGAGTC GGTTCGGCGCAGCAGCGTAGGCGTGGGCCGTAGCAAGTGCATGGTGGACGTGGACCGTAATTACTTACTT CAGAAGTTTAACCAGTTCTTGATCAATGGCAGAATTCAGGATCAAAACAAATGATCGAAAATATGAGGGA TTAGGAGACAATGAGAAGGAGTGGAAGGGTCCATTTTGTTTCATCCAGGGAGCAGATCCCCAGTATGGTA TGATGGATGATATGGCTAATAAGACACCCATCACCTGGAAGGCTGAGATTGAACTTACGAGGAAAGCTGT AGCAGCCATCAATAAGATGAACCCTAAACCAAAGTTCTTTGTGGTGTGCGGGGATCTAGTTCATGCTTTT CCTGGGGATGCTCAGAAAGAAGAACAAGAAGCTGATTTCTTGAGAGAGTTTGCCAAGGTGGATCCCAGTA TACCCTTAGTCTGTGTCTGTGGCAATCATGATGTAGGAAATACTCCAACTAGAAAATCTATACAACACTT CAGGAACAAATTTGGTGATGACTATTTTGGATTTTGGGCTGGAGGTGTGCGATGCTTGGTGTTAAATTCT CAACTCTACGAAGATGCTAGCATGGTAGAAGAACTAAAGAAAGAGCAAGATGTATGGCTGGATGCAGAAT TAGATGCTGCCAAGTCATCAGGATGCAAACATCTTGTGCTGTTCCAGCATATACCATGGTTTCTAAATAC TCCAGATGAAGAGAATGAGTACTTCAATATTGATCAAGATATCAGAATGCCAATGTTGGACAAGTTTCTT GCAGCAGGTGTGAGTACTATATTTTGCGGCCACTACCACCGTAACGCAGGAGGTTCTTATAAAGGGATGG AGGAGGTTGTTACCTCGGCGATGGGCTGCACTCTTTCAGAGAATACCTCCGTCCTAGAAATAGGAGATAC ACCCTCAGGTCTTCGGGTGGTCAAAGTTCATGAGAAGAGCATATCTCATCAGTACTACGGCATGGATGAT ATTCCAGCTACAATTGATCTAGGGCAGGATATTTTATGAGAAGTTAGTCTGTAAAATATTGTCTGTCTGG TTCTAGGAGGGCTCCAATCAGGTAATATGTCAAATGTTATTAACCCTTTTAGTGCCATTGGCTGTTTTAA GCGCACAAATTTTGAAATTGAATGTCATACTTTTGGAGAAAAGTTGTCTGTTTTCTTCAAATTTTAATCA GGCTCATTAAGTGTGGAATCTTGAAACACTTTTTTATAATCAAGATGGACGGTGAAAAAGTAATTATCCC ATGTAATCCTGCTTATTGAACATTGTATATGTGTGTTTATAAACTTGGTGGCACTCTCAGGTTGAATGGG GTTTACTAGATAGCTTGTTTGTGAAGACATGCTGGATAACCAATATATCTGTATATTGTAGTAGAGTATA AGAAAAGAAAACTATAAAATGCATATTAATTGTTGATAGAGTGGTTTATACTCAATGTCATTGTCTTCCA GGTTTGTAAGACCACATAATTGTTGTCGCAATCTTACACAACATTGGAAATACATTTATGTCTTCCAAAT TTCCTACTTTTTAATATAAAAATTTGTGAAATATTTGAAAAACATTAAAACAATATTCAGATTTTTTAAG TGTGCACATTACATTTATAAAGTTATAATACGTTCCAATGCAATGATTGCTTCTTTATGTTGTTCACCCC GTGGTCACAATGGATTGTCAGTGTTTGCTATTTAGATAATGTAAACATAGACCTTTAATGAAATATATTT TTCTCTGCAAGTCACACCTTGTATGCTGCTTCAGTGAAGTTGTTTTTCTCGGCCCTTGACCACATTGTCA TGTCAAGGTTACAAAATATCCCCATTTTCACTGGGCATTCCATTGAATTCTCAAGATTTGGGGGAAAAGT ACGTCATATTGCTCTTGCTTTGTTTGGAGAGAGGAATACAAGTAAGTAGACAGTTGTGGAATAAAGGAGA AGCTTTGTCTGGTTGTGTTTGAATTATACGTTGCAGCTGCTACATGTTTGATCTTCAGTACAAATATTTG AATAGTGCTTTTATATTTATTCTATATAATACCTCAAGACGTGTACTATCATTTCATTTTATGCAAAGAA AATATGGGGGTAATAAATCACATTGAAAAAAACAGGTTACACGTACATACCCAGGATTTTGTGTGGAGGG GGGGGGGGGGGGAGGCACAATTCTAGGGTATGTGGCCTATAGATATGTCAGGGAGGGGTTATATCCCCCT AAATTTGCTATTGTTTTATGGCACATGCTGAAATGCAATGGGAGCTGTTAAGACCACATTAGGAACCATA TCCAAAGTTTGAATTGCCATAAAATGAACCTTGTAAATATATTTTGTTTGATTTAAAGGACGATCCAACC TTTGTGAGAAGAGAGTCATGAATGTTTGAATATGAACATGACTGACAAAGAAAGCGAAAAAAATATACAG TTCCTCAGGTAGACAAAGGAACATCCCTTCAATGCTATTATGTAAAAAGTGAATATGCATGTGACACCTG TTCTACACATTTTTACATAATAGCAGTGAAGATATGTTCCTTTGTCTACCTGAGGAACTGTATATTTTGT CCACTTTCTTTGTCAGTCATGTTCATAGTAATTGAATATGTGATCACTAAACCTATACGAATATTAAATG GGCAGTTTGGTTAATGGATTGCAACAAAGTTGTGAATAACTGTCCCATTTGTAGTGTACAAAATTGTCAT TAATTTATATTTATCCCTTAAGCGCCCTCTCCCTTGAGACACTAGTACTAATATATCATAGATAGCATAC TATTATAGATCCTCTAAAAGGAAAAGACCTTCTGAGTCATATATTTAAAATAAAAAAGACATTCGAGTCA TTTTTTATTGGTGATGAAATAGGAAAATTACCGGTACTGATATAGTGATTAGACCTTTCAAACATTCATA ACTTTTTTATTTTTTAGTTGATTTCATTAAATTTTTCATCAGTCTGCTTTATTGTTGCTTTCTTTTGCTT TCTTTTAGAATATTAGGGTATTATGAACAATCTACATGTACAAGGTACATAATAGATGAGTTATGAATAT AGATACATTTAATTAGGTTGTGGATTGCATTAGGTGATGGTTGAATTTTTTAATAATTTTAGATAAAATA AACACATAGGAAACGTGTGTTAAATGTTAATTGAGTTATCGTAGGCATTTTGATAGCTTTCAATAGGTTC ATGTCAATGTCAGTTTTATGTCTGATACAAATGAAATCATAAGTCTCATCTCATTTTTGTTTTGTGTGTT TTTTTTTCTTTCTGTTTGCATTCAATTTTAAATATGGTTGTAGAACAAAGGTGTGATAATAGAATGAGGT TTGATTTGTTTTTTGATTTGGGATAAATGGAATAGCTTAATAAGACTGCACGAACTTAATTTTGTTTACA AACTTTTTTTTTTTTTCTTCTTCATGTAATAACTGTCGCCTAATTGATATCAAATTTTGATGCCATCTCT TCTGAGAGTGCATGTCATGATATACATGTATGTTTTGATCAATAGTAAGATGTACTGTTGATCTACAGAA TACTTTGAAGTTTGCTATGCTTTTGTTTGTAAATTATTAAATTTACATTACCGGTAGCTTGTGTGGCATG TGTTGTATAAATACACATTCTGATTAATGCAAGTGTGACAAGTCTGTATTAAAAGAAGAATTGTGACATT TATTACACTTTAAGTGTAAAGATATTAAAAAATCCAAAAGTTTATCAAAAGATGCAGTTGACCTTCACAT TTGTCAGAAATAAGTGCCTTTATATCTACTCTTCTTAAGTTCATAGCATTTCTGTAATCCCTATTCCCAA TTTTGATACATGGAATGTCTTTCAAACCATCATTTGAAAGGAAAACACCACAGTTATATAAAGTAGTTAA AGAAACATTATTATACATATATTTTGTACATTTCTTTAGGATATGTAGTAAATATTTACCTGTATTAATC ATACCGGTTATGTATAATAGGTGTATGTATGTATACATTCAATGAAATATGATGTAATATTTTGCAGTCA AATATTTTTGGTAAAAGAATTATATCTTTGTAACTGTACTTTTTTAATGTGTTTGACTTTTAGCTCTTCC ATGCCATAATATTCTTATGAAAGAAAAATACTACCGTTTTCTGACTCAAAGCAGTTTCTTTGTCATGCTG TGATTAATTTGTTAGAAGTCAATTTAGGTTCTGTCGTAAGCAACTTTTTTTCATCACCATAGTGTAATGA GAAAATGTAAGCAAAACGGCGCGTGGGCCGAGGCTGTATCTTATCTTATTTTTAAATGCTGTTGGTACAT ACTACACCTTTCTCATTTGGCAAGGACTCGACCTCCATGCTATTGAGTTTCTGGATACGCCACATGCACA CTACCTGCATTTTGTATATACCTCATTTTATGGTTGTGCTATAAATGTGGAAATATAAAATTAGATGTTT ACTTACATAAAAATAGTAACCAATAGTGACTTTGCCTTTTGTAAGATAGTAATCATAGGGTTTACCTCAT GTTGCTGGTTCTCAAAACACATGTGGCACAAACAAAACTTGGCTACTGCCGCAAGCAAAAAACATGATTA ATCAATGAGATGAATAGAATATTAAATGTTGACAGTTTTGTATTGAATATTGTATAAAATATTATGCTAG AAGCACAAATTACTACACAGATTTATTATTCCTATCTAGACTTGAATACCACATGTATTTTTTCTTTTTA CTCATGTGGATTATCGCTTTGCTCACTATATGTGAATCTTGTTGAAATGTCATACTAGTATAATCAAGAA AAAAGATAGAGAATAGATTCTTGCACTGTTAAACTGTGCTGTTGAATATAGCTAGAACAAGAGGTCATGC AGAAAGGTAACGATTTAAACTGATACTCCCTTGTCATGTCAGTTTGGTTCATGAATGTTCATATAAGATA CATTTAAATGTATTTCCCAGACAAATTTTACAAACTGTAAAAAAGAAGCATTGACAACGGGTGAAGAAAC AAAGTGCAAATCCTTTGGTCCATCTAAATTTGTAGTATTGATGTTCAGTTTCATCACTGCAAGAATTGTT ATTAAGCGTTTACCTCTTTAGTCTTTACTTGGCTACATAAATGTCTTCCACAGGGAGAAATATATGTTAT TCGTAGCAATAAAATTTTAT
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds