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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>JT111906.1 TSA: Strongylocentrotus purpuratus WHL22.273224.1 mRNA sequence ACGTGATCTAAACTAGTAGTAGTCTACGGAGAAAATGGTTATGGATATGGATTTACCGGTATCCAAAATG TCGTATTTCCTCATTGTATTTTACATTTTTGCTTGTGTGCAGTCTGCTTTGTCAGAATGTTCAGTGGCGT CGCCATCAGAAAACAAGTATCTTGAACTGATTGAGCCGTTAAAAGGAAAAACAGTGGAAGTCACAGATAC TGCAAAAAACTACACTTATAAGGTTGGCTTCTGTGAGGGTATCGGAGGTCTGGGCACAGACGATGTAGAT GTAGGAGTTGAGCAGTATACGTTGGCTAAAGTAGCTCTTCATGCTGTAGGGAGAACAACTGCCACTAACA TCATGGCTGGAACTAACTGGATCTTTCTTGAATACCGAGATGGAGATTTGTATAACCACAATTGTAATGG AGAAGCAAGGAGAGCAACCATCTTTATTATGTGTGACCCAAGTGGACTTCTTGTAAATCCAGTTTTGGTT GAAGAAAATAATTTCAGGGATAAAGAATGTGCCTATGTTTTTGAAGTAGGAAGTTCAGTGGCTTGCTCTA ATTCAACATCAGCGCCTTCATCATCATCAGGAATCGGTGTTGGTGGAATTATCGTCATTACAGTTTTAAC AATAGCTGCAGCTTACCTTATCCTAGGGGTTGCATATAAGAGATTTTTCTTGAGAGCCAAAGGAAGAGAG CAGTTTCCACACATAGATTTCTGGACGAACTTTGGTAACTTGACAGCGGATGGCTGTGATTTTGTTTGTC GATGTAACAAGAAGCAACACTCGAAGAGTTACAAAGGGCTAGGAGACGACCAACTTGGGCTAGATGAGGA GGAAGAGAGAGATGAAAATATCTTACCCATGTATTGATCATGCACTCTCAGCATCTAGGAGCCACCAAGG TTTAAGTCAAGCAAGGCACCAAGACAATGTCACTGGATTTCACTCGTCAGGTGATTTTGTGTTGTCCCGT GCCATTCCTGATTGAAATGCAATGCACGGATGTATTACAGTTAAAGCCTTAGGCCCTGTTCATACAAGCA TACTAACTTTAATCCAGGTTTAAACCCAGACTAAGTTACAAGAGATGTTTTTTCATCAATTTAAGAACTG CCAAGTGTCAGCTCTTGATCCGGTATAATACAATCACCATAAATCTGTAACTAAATTATAGATTAAAAGG AATTTAATGAATTTCATTATTTATTTCCATTTCATGACTAATTTCATTTAGTTTATTCAGTTTATAACAG AATAACAGAAATTTGGGCAGAATAAAGGGTTGACACTTGGCATTCCGTAAATCAGTGGACAAATTTAACC CGTTGCCTGTGGGAGCTGGTTGTTTCCAGCATTAAGCCTATGGAAATGATAGAATTCAGTAGTCATCAGG TTAATAGGAAAGTCCACTCTGTTATTCAGTTGGTCTTGATAGAAGCAAAAAAATGAAAGAAACGGGTCAG GGAAAGTTTGAGACACAACCGGTTAAGAATAAGATATTTATGAATTTTTGAAGGTGTCATCAATCAAACA AGAATTGGCTCATTATCTCATTTTTCAGCTTTTATTAAAACCAACTTAATATCAGGGTAGATTTCCCCTT TAAACCAGGATTGATTTAGTCTGCTTTTGTGAATAAGGGTAGTGGGGTTCAGGGTCATTGTGATGATGGT CAGTACTAACTCTGCATGCTTGCTGTTAACATCTGAAATCTGATATGCGACTAATCACACCGAGATAAAG AGCCCTGTGAAAGGACTTTTCACCAAACTCTTTATAGCTCCATTGTTACCAAAAAAAGGGTCAAGTCCGT ACACTGTAATGAAAAGTGCGATTTTACAACAATTCAAAGGCAGTGAGATACTAAGTCCTGTGTGCATTAT CCCGACTTTTGTCTTTTTTTTTTTAAGATAAGCAGCTTGATAGAGCAGGATCATCACTTTAGCATGCATT AAAATACACAGTTGAGAGCAGTTCATTGGTAGTCTGCAAATGTAGACCCTTTTAACTTCACGGTAGTTCC TTTTTTTTCTTCACGAGTGTGTGCTGTGCCAAGGCCAATTTGATGCAGTCTGTAGTCTTTACCTTTCAGA CCCTGTGTTATGCACTATCACTGACTAGAGTTTGTGCCTGCAAACTGGTCATGAACTGTAAAAAAGTGTA GACTGTCGTACTGAACAGTCCCCAACCATATTGAAACGCACTCCTGCACTGGCTGGCATGGCTTTCTCAG CTATGCAGAATACTCTGCGATGCACTGTTTCTCTATTATATGCAAGCAACTGGGGCCTTTTTGCCTGTAG ATTATGCCACTTGCACAATGGCTGCCTCACAATGTCTGCCTACCTGTAGCACTTTTCACACATGTTTTAG GTTTCATAATCCTCAATAGAATACATGTATTAGACCACCTGATTGACAGCAATGTAATGCACTTTCTGCA TCTGGGAAAAACAACTTTTATTTTTCACTCTTTCTATTTTTATCTTTTTCGATTTTGTGTAGAGTTTGCA TTAGAGTCATTGCTTTCAATGAGTTGAGTTTAATGTTTGAATTAATCATATTGTAGCTATAAGCATCATT GCTAGATGATATACCTTACAGTAGTTCTGATTTGCCAAATTCATGGTATACGTATCATTACCATTTTTGT CAAGTACAGGCAATCATTTATTCTGTGTACTCTGATCCTTTAGAAATAATCCTTGATTTAGCTCATGCTG CAATGATAATTATAAACCTTTAGGTCAGTCAGGAACTCCGTGAATTTTACAAGCCGATCGCCTGTCTGAT TATCAAGATATTAATGATTGGAATTACAAATTTTGAAAACCGTTCACCAAACGGTTTTCATAACACTACA GTCTATTGGGGAAAACGAGTATGGTAAAACCGGTCATTCAGATTTTTACTTTTTTGAGGCACTTCTTGAT CATTTTGAAGCGTAATTTTTTTAGGGCTTCCATATTACACCATATCACAGACACTGGTAACATGTAGGAC CGTGTATCTCAGATTTAACATTGTTAAACGATCCCTTTAAGATTTAAAAAAAAAAGTATTAAAGCAAAGG GGGATTTTGTCTATTTGGAGCCAGAAGGGCATTTTCTCATATTGTATTAAACACAGAGTTGACACTTTTC TGGTTTTAATCCTCTTTGAATAATGAATGATTTAATAATCTCTTTCTGCTGACCCGACTTTTGACACTTT TTTTCAATCTTGCCCTGCAGATAGCTTTGTAGGAGAGTGTAGAAATGATGAAATGTGTATGATATGAAAT TGACTTGTAATTTATGGGGTACAGCTTGATTTATTTGATTTTGCGATAAATTAATTTCCCTTAACAATTC CACCGTTGTATTTGGCTTTCTGCACAGTCGTTTGTTGCCACGCATGAATTTTTCCCTAAACAATAGGCAG CAATTGACAGAAAGGTTGCTGGCAACACAATGGTTTTGCAAAATTACTCTTTTCCAGTCTTGATTAGCTC CATGACAACCCTTTTATATAGATTAATCTGGCACTGGAACCAGTTAGATAATCTTGAAGCTCTTGGTGAT ACAGCGTGGCACAGTGGGATTATAAAGATCTAAGCTTCAGCCCAAGTTATTTTAAGCGTAGTATTCATTG TGTTGAAACCATTGTGTGCTGCAGATACTAGTGATTTAAACCTGAATGCATGAAATCCTGGTTTGTTTGT GAAATTATTTATTTGGATATTTTTTTTAGACCTACATGTATAGCAAGCATGATTTCAGACGATCCTTGAA ATTTTTTATAGATGATGTATTCTTCATTTTTGCTTTGATTCTTAAAACCTTGTTTAGATATGATGCAGTT TATAGCAGCCTTTAAAACAAATTGATGACATAAGTGTTTTACGCTTCACAGTTGCCGTTCATGTTCATGT ACATTTCCACACAAAAATGGCAGCTTTCATTTACTACATCATATCTGAGCGAGCCTAAATTGTAAATCTG TTTTGTACAATATCTGAATTCAGTAGGGCCTTTTTATACTGTTTAAAAATGTGTTTAATGAAATACATGT ATGTGTAGGATAATAATTAATTCAATTAGGATAGAGTTATCAATATTTTCTATCAAATGGATTTGTTTTA AGGTATATGTCAATATGACATAAGAGAAAGATTTGATCTGTTTGTTACATTTTATTAGATGAAAGTTAAA AAAAAAAAAATTGTGATAAAAATTGCAATATGATGATCTCTATGCAAGAGATTTGATGTGAGCTGGTAGA AAATATGTTTTTATGTAAACATAGAGCTATTTAGTATTGAATTATTAAAATCAGGTTAGTTTGTTCTTTT ATCTGACTGCAGTCATTTGTATGATTATCGGTATTAAAGCAACTAAGAGGACTGAAGACTTTAAGCCATA TCCAAGGGACTTGGTAATGATGATTAAGGCCTTATTAAAGGGCACTAGCACCTTATTGAAGGGCACTAGC ACTTTGACTTGGTTTTAAACCGTAACATCCCGGTTATAAGACCACTGCTCTACCACTGAGCCAATCAAGC CTTTAGTATGGACAACAACAATACAACTAGGATCAGTTTATGCAGAAAGTTAGTGTGGAAGATGATAAAG AAAGCATTCCAAAATTCAGTGCCTGATGGATCTAGTAAATGTTTAGTTAATACCACCATATACATGTAGC ACACACAAACAAAAAAATCTTCTGCACTGAGCAAAATTTATGGTAGGTGGTGTGTGAAAGGCAAAGTTTG TGGTTGTATTGAAGTTAGGATGTTTTATATTTGTTTATTTTATTGTAAAGACTGATATTGGTCAAAGATT GAGCATTGATCAAGCTTATAGGAATGGGATTCTTCCCCATTTGTGCCACTAGGTTTACTAAAATTGATCA AAAAATAACTTCCATGAGTCATTTATCGGGTTTTTGAAACCTCCTTTTTTTTCTTTCCTTCATGTCATCA CTTTGTTTCCGAGTGTCTTATGGAAGATGAAGAGAAATGATCCATCTTGGGATTTAAAATATTGTTGAAA ATGGTGGGCAGATTTTAAGAGATAATATTGATTTGTTGTTATCGTTTTCTTCACCATCATACTTTATATT ACCCCTCTCATCCCTATCCAACTATCTCTGCCCGTCTCGCTCTATTCCCCCTTCTCTCTATCTCTCTCTC TCTCTCTCTCTCTCTCTGTCTGTATCTCTCACTGTCTCTCTCTCTCTTTCTCTCTCCCCTCCATATATGC ACTCTCCTTCACATTGTTTTTTCTGTCAATAGCCTCCTCTCACACTGTTCTGTTCAGTATCAATTAAGAC ATGTTATTATAAATATATGAAGATGTTTATGTGGAATGTATGAATTCACTTGTATCAAAGGTTTGCATGA ATTGTTTTTAGTTTTTTATCTT
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???blast.eval???
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???blast.matrix???
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???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds