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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
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S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database
Database
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
FASTA query sequence
>JT109473.1 TSA: Strongylocentrotus purpuratus WHL22.354032.1 mRNA sequence TACACACGGAGCTGGTACAGGATTAGGGGAGGTGGGTGAGTGCACTGATTGTCCTGGCGGATATTATTGT AAGAGCCCAGGCCAAGATTCAACAACTGATGAATGCGACCCGGGATTCTTCTGTACTCTAGGTGTGAACG TACGAGCTCCTAATGGGCAGAATAATACCGGGGTCGGAGGTCATTGCTACGCAGGTCACGAGTGTCCGAC GGGAACAGCTTCTCCTGTCCCATGTCTGGCTGGGTTCTACAGCGGCTACACGCAGAGAGCTAGCTGTGAT GTCTGCCCACCAGGCTATTACTGTGAGAATGCCACTGTTGTACCTCTGGAATGTCCAGTCGGTCACTACT GTCCAGACGGAACCGATTACAGTGACCAGTACCCTTGCCCAGCCGGAACATATAACAATGTCACAGGTCA AATGAATCTGACCGACTGCATGTTCTGCCCACCTGGCATGTACTGTGAAGGAACAGGCTTAGACTACCCC AGCGGTTGGTGCGACGAAGGATTCTTCTGCACAGGAGGCTCCTATGCCAAGAGACCATTCAACGTAGGCG TTCTAGTCAACAACAGCTACCAGTATCCAGATGATACCTGTCACCCACAGTTTGACTGCGTATGTCCAGA CTACAGCAACAGCACTGGCGGACTCTGTGGGCCAGGGTACTACTGCCCTCGTGGGTCACCGAGTCCTCTG AATTGTCCTGCAGGAATGTACTGCGAGACACCCGGGCTGGCTGAACCTACTGGTAACTGCTCTGCTGGGT CTTACTGCAACCACACAAGCTTTGAGCCTGATCAGCACGCCTGTCCTCCGGGCTACTACTGCCCCGTTGG GACGGGTGTACCGTTCGCCTGCCCCGCTGGTACGTACAGCAACACCTCGGGCAACGTGGAGCTGGCCGAC TGCCTCAACTGCACATCCGGACAGTACTGTGAAGGTGAAGGCAATGCCGAACCGGACAATGACTGCGATC CTGGCTACTACTGTCCCGGCGGCCAAACCTCGTCCAACCCGGTTGGTCTGGAGTGTCCGGAGGGTCACTA CTGCCCCGTGGGATCTCATGACCCAATCCTGTGTGAGAACGGAACGTACCAGGCCAACACGAAACAGCCT TCTTGTGACCAGTGTCCGGGCGGATACTATTGCGATCCAACAGAATCTGGACCAGTCATCACCCCTGTGA CTTGCCCTAGGGGGTACTTCTGCCCCCCTGGCACTGGATTATCCACTACCAATGCCTGCCCAGAGGGTAC GTTTGGTGACAGCGATGGTTACGATGATCTGGAAGACTGCGTACAGTGCACGGCAGGCTCGTACTGTGAG GAGCCAGCGTTGTCCACACCGACCGGGGAGTGCTATGCAGGGTTCTATTGCACTAGCGGGGCATCCAGCC CAACGCCTTATAATGACACGGTCGATGCTGACAACAGTTCATTCACCGGCAATGATGTCTGCCCCAAGGG TTACTACTGCACCAACGGGACCGACTACCCTGAGCCCTGCCCGCCTGGGACATTCTCAAACAACGTTCGG GTGACTGAGGAGGAGGACTGCGATCCGTGTCCCGCTGGAAAATACTGTAATCTTCAAGCTTTCATCAGGG TTAATGAGGCGCCGGACTGCGATGATGGCTACGTCTGTACAGGTGGAAGTACAACCGGTTCCCCCTCCAG CGACAGCGGGATGGGCTACCCTTGCCCGGCCGGTCACTACTGCCCCTCGGGGGTGACCAGTGAGCTGGGT TGCCCCATAGGAACGTATCAACCTGATGAAGGCCAGGCTAACTGTACCACCTGTCCCGACGGTCTGATGT GCTTGTACACCAATATGACCATGCCAGAGCCGTGTAAATCAGGTCACTACTGTGTCTTTGGTGAGCAGCT GCCCATCCCTTGTCCTCCTGGCCGATTTAACAACATCACTGGTATCAGCTCAGAGGAGGAGTGTCCATAC TGTGTGTCTGGGCAGTACTGCGCTGGCTATGGTAACGTCTGGCCCACAGGACCATGCACTGCAGGTTACC ACTGCCAGGGTGGAGCTGTGGATCAGGTCCCAACGGCCACCTCAGAGTTTTCTGAGAACGGACTTTGTCC CGTCGGCCATTACTGCGACGAGGGCACACCCGCTCCTGAGCAGTGCCCTTCAGGAACCATCCGGTATACC GAGGGTGCGGCGGGCGTCGACGACTGCCTGCCCTGCCCTGGTGGCTTCTACTGCGATACTCCGGGCAAGA CCAACGCAACGGCAGAATGCACGGCCGGATTCTACTGCCCGGCCAACGAGACCATCACTGCCCCGACCCC GCAGGAATTCCTGTGTCCAGTCGGTCACTACTGTCCCGAGGGTAGTCCAGCCCCTGTACCCTGTGGGGTT GGTAACTACCAGCCGGACATGGGAAGGGATTCTTGCATTGCTTGCCAGGCCGGGTACTACTGCCAGAGCT CTCTGTTCCCGGATCCGAAGCCGTGCCCAGCTTATAACTATTGTCCAGCAGCTACACAGACACCGATCCC TTGCCCTGATGGAACTTTCACGTATCCGAACGACACAGGCTTGCAATCAGAGTATGAGTGCTTGCCCTGT CTTGCTGGGCAGTACTGCCGAGGAGGCCAGCTCCAGGGTGACTGCTCCCAGGGGTACCTGTGCTTGAGTA CCAGCTCAGAGTATACACCCAACGGGACCTTCCCCTCCTTGTACGACGTCGACAAGACCCAGTGCGAGGC CAACACCACCTGTGCCGGTCCCTGCCCCCTCAGCCACTACTGCCCTGAGGGAACAACAGATGCGATCCCC TGCAGGAACTTCACCTATAGGGCCGATTACTTTGGGAGTGTGGAGGAAGACTGCTATCCCTGTGTTGCTG GGAGCTACTGTCTTGAAGGCGACCCTACCCTCTACCCATGCCCCCTGGGCCACTACTGCCTGGAGGGGCT CGCACCCATCGTGTGCCCTCTCTATCATTATCGAGACGTTGAGGGAGCTCCGAGCATGCAGGACTGCTTC AACTGTGAGCCTGGCTACTTCTGTAACGAAACAGGAATGACTAACTACACCTACTACCCATGCCCCGTTG GTCACTACTGTGAGGAAGCCACGACTGAACCAGAGCCATGCACCGGAGGACGCATGAGCACCACCGAGGC TCGCGTCAGCAACGAACACTGCCCTCTATGTACGCCGGGATACTACTGTCCCAACGATACTATCAACGTC CATGGCATACCGTGTCGACCAACGTATGAGTGCCCTGAAGGAGCTGCAATTGAAGTGACATGCCGAGGAG GATACTACTGCGAAGGAGTGACTGGGCAACCCCCTATCTGTCCAGGAGGCTATTACTGCCCCATCGGATC ATTTGCACCAACCATGTGTTTCTACCCGAAATACTGTCCAGAGGGTACTGAAGTACCCCTTGCGTGTCCC CTAGGCTACAAGGCAGTCAATCATAACGAACTACGTAGCGACGATGCAGGATCTTGCCGTATCTGCCCTG CGGGTACCTATGGCAACCACACGGAGCGTTTCTACTGCGCTGACTGCCCCGAGGGATACTACTGCCCCGA AGGTACTGGCAACCCTCAAGACTACCCGTGCGAAGAAGGCTACTACTGCCCGGCCAATTCCTCGGCACCG ACACCCTGCCCACCGGGAACGTTCGGAAACCAGGTCCAAGCGTACAGCGAAGATCAGTGCGTGGACTGCC CCACCAACACCTATAACAACTTGGGTGCTCAGATAGCCTGTAGGCCATGTGGAAGTGCCTCAAGTGCTGA ACCAGGAAGCGCCATGTGCACCTGCAATGGCCTCTACCGATCCTTCCAGATCCTTGATGGATCCTGCGAA TGCCAGTCGGGTTACGTCTTCTACGACGAGACCGATCAGGAACAGCAGGAGGGCAACGGCGACGGTGACT GCCAGCCGAGGGTCGACACCCGGTGCGAGCTCTCGCAGACCCGTGATGCGAGCACCCGCGAGTGTGTGGA CCCGGCAGAGGCGGACTGTTCGGTGGCGTGTACTCTTGGTAGCGGTGGAACGTACAACGTAGATCTTGGA AAGTGCGAATGTAATCAGTACACCACCGTGGCGGAAATTTGTGATTCGAACTGCACGGCTAACATGCCGA CGACCATGGCTTCTGTCGATGTCAATGGCGTCCTAAGTTTGAGCTCCACTGATGGATATGGTAACACTAT AACCAAGTCCTTGTCAGGAACCATCGGACCCAACGTTCATACAACGGGTCAGAAGAAAACTGAGATGTGT GAAACGTCTCCCACTGGTACCACCTGTGTTATTCCCAAAGATGTGACCGATGTCGATGCTTTTACATCAG AAGATTCCACAGTGATTGTGACCACGCCGTTGTACACCACTTCTGACTCCTACACCACGATGAACTACTC CATTGGAGCCACCAACTCATCCCGACGTCGCCTCCTCTCCACCCAGTCAACCACCGGGGTGAGCGGTATC GAGAACCCGCTGGTGTGCCTTGAGCTTGAAGACCTCATTCTCTTCCGTGTCAACATCGACCACAATAACC GCTCCCTCAGCAACTACCCCGTCTACCAGAAGGACCACTTGTTCAACACCAACCCGACCTTCGACTACAG CGAGTTCCGCGACCTGCGCTTCTACATCCTCAACACTAACGTGTCCATCTCGTTCTTCGCCCATGTCTTC ACCGAGCCGGGACGTTATGTGATTGGCGATGCGCAGGAGCCGAGCTGGGAGATCATAGTGGCCGTCCAGG AGCAGGATGTCTCCTGCGATTCCATCAGGATCGGACCGTCCAACCCGGCTAACCTGGTCCTGCAGGACGT CAGCAAGACCAACAACGTCAACGAGGAACCTGACTGGGGTCTCATAATCGGTATGCTTGCTTTCCTTGGT GCCTGTATCATCATGCTGGTGATCGCTGTCATCGTCTGGAGACCCATGGATGCCGGCATCTACCCGATGA AGGCCTGGAAACCCAAGTACCGCGCCCTAGGTGCCCCACCCAAGATCCCCACCTATCTCCAATACAAGGA TCACGAACGGGAGGAGCTGATTGCAGGTACCACTGTAGCCAGCACCTCGGCTGTTGCTGTGTCAGGGATG GCCTCAGGCAATCCCACACTCCTAGAGGACTTCAATGTGCGGACACTGTATGACAAACTGGAAGATCAGA CGCTCTATCTCTCACAGCAGCTGGCAAAGCAGCAGGAAGATCTTCAAGGCTTCTATGAACGCATGTCCAA ACAGACAGATGGACTGAAGGATCTCCTGGTCAACTTGGATGTCAACAAGCTGGAACGTCTCTCCGGCCAC AGACGAGGGCGCCGTGGTAGTGGGTCAAGCAGTGACAGCAGCAACAATGGCCAAGATATACGTGTCATGA ATTTCTCTTCCAGCCGCACCTATAATTTCTCAGGATCCAACAGGAGGGAACAGGAGCTGATGGAGGCTCT GCAGCTCCTGCTGGAGAAGCTCAACACCGGCAAGATCCCCCTGAGCCAGGAGATGCTCCAGCAGGCAGGT CTGGCTCCAGGTGGATCCATCTCTGGAGGAGGCGTGGTGTCCGGGAAGGGAGCCGCCGTGGACAAGCTCC TGGCCAAGCAGAAGGCGGAGCGCATGCACCTGGACAAGGAGCTGAGGGAGGAGGCGGAGAACGAGATGGA GAAGCTCCTAGCAGACCATGATGAAAAGCGTGCCTTGCTGAGCAGGCAGATGTCCGAGAACCTCCAAGCC AAGCTGGAGCAGGCCACCTCCCAGGAGGAAATTGAAAAGATCATGGCCGAGCATGAGAAGAAGTTGGCCG ACGGTCTGGATCAGTTGGACAAGCAGAAGGCCAAGCAGATGCAAGACTTGACCAGGAGGCTGGCCAACCG ACGGCGGGACAGAGAGGGTGCCCTCAAAAGGCAACACAAGGCAGAGGCCGAGCAGCTCGGCATAAAGCTG GAAGATGTCGACGGGACGGACCCAGAGGGAGTCCTCCAGGACCAGGGCCTGGACCTGGACCTTCTGATGG CCGAGGAGAACGCTAGCAGGACCAAGGACCAGACTAACATCACAAAGAACCTAGCCAAGGAACAACAGAA GATGATGTCAGAGAACATGAACACTACCTTGACAAGCCTTGAAGAAACAGGTATCCTCTCAGAGTCTGAT GTGAGCGACCTTAAGGTAGAACTGGAGAGCTTGGAAGACGGACTCAAGAGAAAGCTAGAGAAGAGGAAGT CAGACCTCAACAGGAACATGAAGAACAAGATGGCTGAAAAGAGGAGGAGAAAGACAAAGAAACTTCAGAC GCAGCACGATAAGGAACTTGAGAAATGTAACTCCAGCGAGGAGGCTGAGGAGGTGGGGAAGAGACATCAG AAGAGACTGGAGACCATGGAGAAATGGCTTGACAGCGAAGAGAATCAACTAGCTCAGTCAATTGAGAAGG AGATCGGTAATCGATTGGCCAAGGAACTTCAAGAGGGACATAAGGAGATCCTTGACAAGCTTGCTGGCTC TCACGGTGTCGACCAAGTCACCCAGCAGCGTCTCCTAGATCAGCTTCGTCGCAACAACGAGGACATCTCC TACGAACTTGGGGTCCAGCGCGAGCAGCAGTCCTCCAACTTCGACGCCAAGATCGCGGCCCGTAGAGGGC GCCGTAAGCAGGACATGCACCGCCTCGCCGAGGAGGAGGCCGCTCAACGCATCCTGAAGGAGCAGGAGAA GGCGGTCGGGAAGAAGGACGATCGGGGCGGATTCAGCATCATGGGCGTGGCGGAAGACACACCCATCAAC ATGGCAGAGCTCTCCATGGAAGAGCAGGCTGTGGTCAGGGAGCACCAACGCGTCCAAGAGGAGATGAAGG AGCGCCACGAGCAGGAGAAGGAGGACCTCCAGAAGAACCTTGGTGAGGGAGCCAAGACCAAGGAAGCCCA AGAGGTCAAGAAGCTGGAGCGGGAGAAGTCCAAGGTCCTGTCGGAGACCCGGAACAAGCACGCCGCGGAG CTGGCCGCCCGTCAGGACCTCTCCGAAGAGGAGATGAAGCTGTTGCTCCAGACGCATGCCCGAGAGCTGG AAGACATCGAGGATCGCATGGAGAGCGAGAGGACCAGACAGCAGCTGGCGGTGCGGGACAGGCTGGCAGC GCGCAAGAAGAGACTCCTGGAGGACCAGAGGCGGAAGCAGGAGCTGGATCTTGCCAAGGAGGCGATCGAG CAGAAGAAGGAGCTGAGGGATGTCCACGGGAAGGTGGTGAAGGAAGCAGAGAGGAAGGAGATGGTGGAAG AGATACAGAAAGCTGGAGGACAGAACACGGACAAAGTCATCAAAGAGGTTCTTGCCAAACGCCAAGCCCA GGAAGCCAGGGGCCTCGATGCCCAATTTGCTGCTGAACGTCGCATCGCCGTCGAGGGTGCTCTCGACAAG CTCCACGACAAGTACAACGCCAAACGCGACTCCATGCTCCAGAGGCACGAGAAGGAACTTGCAGATCTGG CCAAGGAAGACCTGACGTCGGACCAACGGCAGCAACGCAAGGCTGCACTCCTCAACAAGCAGCAGATTGA GCTGAACAAGCTGGAGCGGGAGCTGGCGGACGAGAAGAAGGGCATTGAGAAGGGCGCCCTCAGCGACTGG GAGCTCCGATACGCCCGAGCCAAGCTCCAGATGAAGGAGAGACACTATCAGGAGTATGCGGATGCCTTGA AAGAGTTAAGCTCAGACCAAGACGCTAACCATGTGGTTAATGCCGAACAGGCCGCCAAGGCAGCTCAAGA GATTGAAGAAGTCAGGCAGAAGCTAGAATCTGAGAGGATGGCCAACGAGGAGAGGATCAGGAAAGAAAGA GAAGACTTTGAGGAGAACGAGAAGAAGAAGATGGCGCGTGAATTGGAAGAATACGAAAGCAAACTAACTG ATGAAGAGAAGAAAGATAGAGAGAAGAACGAGAAGAGAATCAATGGTCTCAACAAGAGAAAAGATCAACT CATCAAAGATAAGAAGAAGAAACAAGAGGAGAAACTGTCGGCCATGAAGGATCAAGGAGCAAGCCAGGAG GAGCAAGAGAAGATCATTGCCGAGTTTGAAAGAGATCTTCAGAAGGTCCAAAACCAGATGGATGCTGATA GACTGAGGATGCAGAGTGAACTAGAGGAGAGAATCCGAAAGCGGAAGGAGGAGAGACGAAAGGCCAAGGT AGAACAGGTGCAGGGCCAGGTGGAGGAGAACATCAAGGAGAAAGAGGAGGAGCTCAAGTCAGAGGAAGAG AGGATGAAGGCGGAAGAGGTAATCCTGCTGCGTAACAGTGTAGAATCAGACCACCTCCTTTCGGATGCTC CCGCCCAACAAGAACAAGCCTTCCCGACGGACTACACCATGGCTGCTGCCCTCAGTGATGCAGACTTGGC CAACCTTCTCATGTCATCACCGCTCTACCGCAAGCTGGGCGAGATCAAGCGTACCATGGAGGATGGTACG CTGCCTCAGCGCAAGCGTGGAGAAGAAATCTTCACAGACAAGAACGACACCGAATGGACAAACGACCAGG AGCTCGTGCCGATCGACCTCAACAAGCTCTCACCCCGCAGCTTCGTGGCTTACCGCTTTGGATGCTTCGT GGTGCGTCTCGTCGCTGTCCACTGCGGCCACAAGCCCGTCTCGCTGCTCATCGCGGAGAAGATCCCCGTC AACGAGAAGCTTGTGAGGAACGCTTACCGGAACTCGTTCCACTACGATGACCTGAACCATATCCTGTACG TGAGGGAGGAGAGGCTTGGTAGCGTCGGAGAGTTCATGCTCGTTATCATCCATGCTCTTGCTCACATCAA AGCAGGTGATATGCGAGACGACACCAACGTCGACTTCCTCCGCGAGTTCCACCTTGCGCTATCCGTCGTT TGCAACGATCTCTTCTTCGCCCGCTACCGCAGCAAGAACTCACCGCGGGACACCACCTCTGACCGGGACG GCGAGGGTATCAGCACCCTGGAGGAGCCGCCACTCGACCCCGCCCAGTCCAAGGCCCTCATCGATGCCAT GTTTGGTGGAGAGCAGCTGGAGACAGAGAAGGAGGACTCGTTGGAGAGGCTCATGGACGTCAAGCTCCTG CATGGTAGCGATGAGGATGGGGTTCACTTCAACAAGGAGCTCCTCTCAGAGAGGATGAGCTCGTTCAGTA ACTTTAGTCTGAACGACAAGATGAGGAACTTCCTTGGAGCAGTAGAAGATAAGATGGCGTTGTCAAGGCA ACATGGGAGCAGTGATGATGTTGACAAACGTCTGGCAAAGCTGACTGGAAAGCCAGCAACATCCAAGACT CATCCAGCTATGAAGGGCATGAAAGGCGCCATTGACCAGCTCCCCGATGAGCTGAGTGGTACCGCACTCT GGCAGAGTGTGTCCCAGGGAGCTACGGCCAAGGAGCGTTCCGGCGGTCGCATCATGCTGGCTGCTAGCAN AGCCCAGGATAAGAACCTACAGAAACAATTCCTTATGGACGAAGTCAACTCACTGACGGAGAAACTTGAT AAGCTCAATACCACCTTCGCAGAGCTCAGCACCAAATACGTCAAGACGCAGGGCACGATCAGCGCCATCT ATGAAGAACTACACTCTCAGAAGACACTTGCAGAGGAAGAGAAGGAGAAGCCTGAGGAGAAGGAGAAGCT GATGAAGGACACAACTAAACTTCTGAGCGATGCACAAAACAACCTGACCGACCTTAATCTCAAACGGGAC ACTCTCTCCAAGAAGATTGACTCGTACAGCAAGCTACTTGAAGAGAGACAGCAGCAACTACAAACCCAAC TCAGACGCAAAGATGTCAAGAAGAAGTAAAAACTCCCCTGTTATGCATAATGGAATGGTCACTTAGTCAT AGAGTCGTGCGGTATCTGGGTTATTCCATTTAGTCTCTAAGGGATGATACTCGTATAAGATTTGAAAATA TTGACCTGTACAGTAAGTTATTTGTAGAAGGAAAATACATTTTGTAGCAAGTACACTGCCCACTCGGATG TAAGGATTCAATAAGTGAAAACTCCCCTTTATCGCATAATGGAACAGTCCGTTTGTTATAAAGTCATGTA CCATATGGGTTATTTCACTGAGTTAAAGAGGGAAGTGCAGTCTGGTGAGAACTGTTTTACAGTTATACAT GTAGGCCACAACTGGGGTGCCAATTTAAGAGCATAAGTTTTTGGTTTATCTTCCACAGAAATCAAATAGA ACAGCCGCAATTTTATAACAATGTGTACAATGAGG
Load query from file:
Options
E value
0.1 (Default)
10
1
0.001
1e-5
1e-25
1e-50
1e-100
Number of alignments
25
1
5
50
100
Word size
Default
2
3
4
5
6
7
8
9
10
11
12
13
14
15
Default = 11 for blastn, 3 for all others.
Matrix
BLOSUM62 (Default)
BLOSUM45
BLOSUM80
PAM30
PAM70
Gapped alignment
True
False
Automatically set to False for sequences longer than 4500 bytes
Filtering
On
Off
BLAST time is limited to 30 seconds
