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BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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Blast program
blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database
Database
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
FASTA query sequence
>XM_030980043.1 PREDICTED: Strongylocentrotus purpuratus vasculin-like (LOC115918469), transcript variant X1, mRNA AAGAGCTAGCGATAACATCCTCCATGTTGCTTTGCTTTATGCCAATGCATGCTCGAGATAGGAAAAACCA CACAACAACAAAACGCGGAATTGATTGAATATTTTTGTTTCACTGACGATTACAGTTGAACACTTCATCG ATATACTACAAATTGACCAGCTGCTGATTCTATAAAATATTTTCACCCATTTAAGCTGAAAGAAACCAGT CGGAAGATTTTTTGAGAACATCCATTTTGGTGAACAAATTGACCCAGCCACTCGCTACTCAGAAGTCAAC ATTGAGCTGTAAAAGTGGATCATCAATGCTGAAGGTAGCAGGCATATATTCTATCTTCACTCTGACAAGA AGTGGAAAAGAAAAGATGGCTGCATAATTAGAGCTCAACTCAACGCAAGCCATACGTTAACCAGCAAAGT ATTCCATACCATCCCATTATTTTTCAAAAAGTGCTAGCAGAAAGAGATATGGAAGAAAATATATAGGCTT TTCCTTGCTCTCTAGAAGATCGAAGCAATAATAATCTTTATTTAGTTAATTTTCTCAACTTGATATTGCA CAACAGCTTGCAGAAGATGAATTGACAGTGGTCTTAGACAAATCAGAATAGTCGTTGTTGGATATAATCA AGAAATATCACCAAATTGTATAGATTAAATACAGGATGCTAAAGTTGTGAAGTCGCAAGCCGACAGATAT GAAATGCTCATAAAGGAAATAGATAGTTATCTTAAAAGTGTAGTAACCCTTCAGCGATTCGATGTGAGCT GACGCCAATCCCAACATCATTCTGCTTTCAGTCAACTGTATTTTTGCGAGAAAAATCCCTCGTCTTCCAT TTTTTCTACAAACTGATCCTTGATCCGGACATTAAGATGGGGAGGTAACCAAAATAAAAGTTAGTTACAT TGTGTAGCTGGACGTGTTTCCAGACTATTTCCTTCTCCAGTGTGAGCGAGAAAGAAATTGCTTGTGCCTG ATAGACTGATCATTAGCTGAGAAGCCAAAGGTGATAACTGGTTTTTCCTGCGCTGTTCTGCTGATTCGTT CTCAGGCCAGGAGGACCAGTATGGTATGCCAGTGGCTACCATGGCCAACCCTCCTGAGCATGACTTTGCT CCATCTTGGCTCAAGATCCCCAATGACAACCAGCTTATAGCGAAACCTCATTCAGACCATCACAGAGCAG GCTCTAAGTACCCCTCCCCACACCCTGATGGGGGTCGGCAGCGTAGCAGACACCCCTCCAACGAGTCCTT CCCAGGCTTCCCTCCTAACCACACCCAGCAACCCAACATCCATGGATACCGGAGCCGAGATGAGAAAAGA TTCCGACCAGGACCCCGCTACCACTCCCTAGAAGACCCCCTGCGTCACTCAGAGCTTCCCAGCGCTTATG CACCCCTCAACCAGAACAATGGCTTCCTTCCCCCACCCCCTTCCATGGGCTACTTTCCCTCTTCTCTGGA CTATAGTTTCAACCCTAAGCGTGGCGGACCTCCGCCCCTCCACCACAACCTCAACCGGCTCGACCCTCAC GGCTACCACCATGGAGGCAGGAGCTACGGTGGTGGTGATGGGGGGCGTGGTCGGTACGGAGGAGGAGGCA GTAGGCATGGGCGTGGCGGAGGCGTGAACGGCAAGGCTGGTCCTGAGAACGGGGAATCTAATGGTGAGGA GAATGGAGGGGGAGGAGGAGTTAGGAAAGGTGATGCAGCCAGTGCCAAAGGAGATGAAGGGAAAACAAAT GGAGACAAAAGTGCCTTATCTAGTCATGACTTTCCCTCATTATCTGGCGAAGCTAACCGTGAAGTCAAAA AGGAATCCTCAAAACCTGCTGGAGCATGGGAGAAACGGCCGGGTACCTCCAACATCAGCATAGGCGGCAA GAAACTGCAACTGGTTCAGAAATCAATAACAGTCAGCGACTTGCCAACTACCAATGGCTCCCAGCCCACA GCAGGCAAGATGTCACCCTCTGGTGTCAACGGTGTAAGCAACCTGACGTCGGGTAGCAAGGTGGGTGGGA TGCAGCAGGCGGTACAGAACAAGGGTGCCAAGACAGGGCGTGGGGCAGTGCCCCTCTCCTCGGTCAGCTC CGGTGTGTACAAGTCACTCGTCCCCAAGTCCTCTACTCCTACAAAGGCCACCACACCAAGGAAACCCATT GCGAAGGAAGTGGTTATCCGCCCAGCTCCTGTCATCAGTAATAAAGACAAGTCAGCACTTCCTCTCACAT CATCATCCTCATCATCACCATCACCGTCATCATCAATGTCCTCCTCCACCTCCTCCTCTTCATCCACATC ATCGTCGACGTCTCTGCCATCGCCGTCGGGAAACGCAGCTTCATCACAACCTTCCTCCAACCCTCCAGTG AAAGAGCAGGGCTCTCCGCGCTCCACCTCTGCCATAGACATTCCCACCCCTCGCATGGTGACTGTGTCAA AGGTCAAGCGGACGGACAAGGTTGACTTCCTGAAGGAGCTGCGTCGCACCGGGAGCGTGGACTCTCCAAG GTTACCGCTCAGCAGCGAGCCTCTGGTCAATGGCATTGACCACTACACAAACAACCACAATGACCAATCT GGTCACTATCACAACTACAATAGGTCTTCCACCAAGCAGTACGAAAAGACAAATGCTACCACGATTTACC AGCAACCAGACCCCTTTGAAGATTTAGACATAGTTGAGCCTAGACAAGATACTATAATCAACAACCAACT ACCCATCAGCAAGTGCAATGGCCATTACGACAATGAAGGCCAGAATGACAAGGACGTCGATGACAACCTT GACTTGGTCACCAACAATGGCCGTATGGACATGCCCCTCAACGAGCAGAACCTCCTGGACTGTCAACCGA TGGAGCTTTCCAGTAGTTTAGAAGCAGAGAAAAGGTTACTGCAAGAGATGGGTTGGCATGAGCACAGTGA CAATGAAGAAGGATACGCACCGATCACTGAAGACGAACTCAAGGAGTTCAAGATCAGGTCACAACAGATG GGGAAGAATGGTTTCAGTCGACCCGCTCAGCCCATCATCCTCAACCTCATCCCTCATCCTGTCATGAACG CCATGACGACCATGGCAATCGAAGACGCAGAGCTCAGCTCCTCCTCCGATGAGTCCTCGGATGATGATGA CTTATAGTAGCGGCTGGCCTCTCCTTCAGTATGAACCGATCGGTGGTCTTTCTTACGTAACGGAACAGAA CATTTTGCTCTTCATCGTCGACGAATCAGTGCTTCTCTCTGATGCAAATCCTTGCAATACATCCACGATA AATAACTCTGTGCCTCATGAATGCAACAGTATTTTGTGTTCATACAGTTTGTTCGGTGTGTTTGTTTCAT CTTCTGGAAATCGATGTTTGAAATATTGATAGGACAGGAGCTGTGCACCTTTTTCATTACTAACAATGAG GTCAGAAAGTGACAGTGGTTCAAAAACAATCGAGTACTGAAAGATCATATCTCAACTGGTCTTGTTTGTT TTTTATGAGTGAATTCCACTTCATGATAACCACTTTCAGCAGCAGTGGAAAATATGTTTACAAGTTGATA AATGAAAAGAATGTTTTGCACACATGCTCACCTTAATACATGCCCACGAAATGCTACCAATTTATTTCCC ATGAAGGGGTTCTTTCAGTTACAAGTTGGGCAATATAATTGTAAAACGGACCAGGTATGTTTGATGGTAT TTTGTTAAGGAAAAGAATAATAGTGAAAATAATTTGCCTTTTTGTAAACATTGGCTCTAAATACAAGCTT TACAGAGCTGTTTATTTTCATTAGTGTCAGGTGACTCATGAACATGTCATGTGACTTGGATGGTAACTTA TCCTTTCTTGGGCATATCACAATAGACTGGTACTCTCACCTACTATCAAATATTATCTTTCTGTTTACCA TTCAAAATATCAGGATGTAGCTTGTTATTTAACACAATCTGCCAAAGTTTACGGCCCCTGTTCACTTTGC TTACAGATGAAGAAAAGCACAACGATAGGAAAAAGTAAACAATTATAAAAAAAAAAAAGGCTTCACTTCA TTTGTACCCCTCACACTTTTATGGATAGATTAACACAATCTGCTAAAGTGTAGTTTGTGCAGAGAACAAT GTGGACACAGATTGTATTTTCTAGTTTTGTAACATATTTTTCCCCAAGTGCTTACTTTTAATGTTTGACA AACATTGTCATCATTTAACTATGTTTATATGAAGAAAAGGAAAAAGAAAAGATGAAGGGAGCAGAGAAAA GACAAAGGGAGTGAAAGGAATCATGTTGTATCTTCCAAGAAAAAATCTATATATATATATCATACTTGTA CTTCCAATCATACGGTGTGTCTTTTTTGTACTGAAACAAAAGTTTTTATTGCAATTTTTAAAATGAACCA TTTTTCTACATCAATCTGATTTCTTACTGATCTCTTCGTTCAATTTCTGCGTGTTTTCATTCATGGATCA TACGTCTGATTTTTCACTGATCTGTTTGTTGAATCTCTCATTGTTTGCATACATCAGTCATTTTATTCAG TGTTTTTCATATTATGCCAACAAGTTTTCCAGATCAAATAGCATTTTGTCTGCAATAATACTATAAAACT GGAAACGTTTGCAAGCTCGAGATGTTCACGAATTTCAACCACAACTAACACAACGCTAATTTTGTTGGCG ATTCACAATAGTTTCTGCTGTAGAAATCTCTTATCGTTTACAATTTGTGACAGTTTCCGGTGTTAAAGTA ATATAGGGTATTTTATCTGTTTGTTAGTGCTTGTAAAAATGCACTTTGAAGTAGAACGCTTATAGGTTGT TTTGCTTACTGATATCAAGCTTTGTTTACAATTTTGAGCAAAAAGTTCACCCCCACCCCCACCCCCCAGA AAAAGTACAATTCTCTGTGAGGGCTATTTCAGTAGATTGAGTATCTTCTCCCAAAACTGTCGGATGAGTC GCCGCTTACATCCTGTTGAAACGCATGTTATGAAATTAATAAGTGTTTGCACTTTCAACAAGATGGCGGT GAAGTTGAGACAGCCGTCTGGGGTCAGATTGCTGAGAGCTCCTGCATTTTCAGTTGAAGACTGGTATCCT CTGATTAGGAGGGGATATTACTAATAAAAGCATTTTATGAATGAGATAAGTGTTTATTCTCTTTTTATTT AATTCAAGAAAAGGGCAGTTTATGGTTTAAAACGAAATCCGACCCATGCTAGAAATATATTAGTTTAGAT TAGATCACTTTATTGCTATCCCAAATTCAGAGCAAAAACAAATTAACTGATTTAACAGGATCAAGTCGCA CCTTTATGCCCTGATCTCTTTAAAATTGGAATCGATTGATATTGCATATTGCCTGTGTGATAAAACTAAT GCACCTTGATAATAAATTGAACACAGGCAATTTACAGTTTCACATCAAGAGCAATTTGTTTTCTTTTCAT GTAAAATATTTGTGTGTGGAAATACCTTGTTGCCAGCTTACACAAAACGATTGAAGTGTCTTTCCAAAGA GTTTACGCTTCTTACAGGAGACACAAGATGGATGAGAATAAAGGAAAATGTGTAAATCCATGAGACAAAT AGGAAGAGCAGAATAGGTTACACTGAATTATGATGATTTTAGAGGAGAACTGACCGCCTAGATTGTTATC TGAAGCAACGTTGAGAGGACTATGTTGGTATAAATTTATTTTTTTGTTGATGGATTTTATTCTTATTGTG TCTTACCAGTGATTCTATCCAGATGTGCTTTATTGTAAAGTAATAATTGTCTTTGGTTTTGTCGGATGAG GAAGTACTGATCTTGCAGATCCAATTAACATTGAGGTACTCATGGATGGACATTAAACCGGGAGCAATTT ATGGAGCCTTATAAACTAAATGAAATGGTCAAGCTGACCTATGACATATGATTTATTTTCCAGAAACATG TGTATATTTTTTCTTTTCAAATGCTATTGTGTAGAGTTTATCCGGGAAAATGTGAGATTTTGGGGGCGTT TTTTCCTTTTTCTGCTGGACTTACTTGCTTCATTTTTTATTGTCAAAAAAACTATTTTCATTGTCACCTC ATTTTGTTATGATAGATTTGTTGTTGTTGATACAATCCCAGAGTGATTCCAGTAGACACTGAGGTTGTGT GTTGGACACAGAAAGGACTAACTGTTCAAAGATTCAAAAGCCCTTCTTGTACTCATGCTAACGACTTCTA ACAACGTTTATTTACGCTCATCATTAAGCAAGTCTTCTTGTAACCAGCAATACCTTTTTTTTGTCAGCAA GTCTTGGACAAAGCTCTCTCCTTATTTGCATCAAATCATCACTTTCAGTTTAGTGTTGTATTTGACATTT TGTTTACTTTATACGATAACAACAACAACAGAAGATTAGCAATCGAAGATCTAAGACCATTGACCACATT CAGAGTTATACTTACATTCAAATGGTTGGTGTTTTGATCTAGAAGTATTGCCAAGTTATGATGTATTTAA CGAAAAAGACCTTTGAGAGGCAAATAATGAATGCTTTCACCATTTAAACTTTGTTCAGTTCAAAGCTATT TGTTTTGTTCCTTTTTCTGTTTAAGGCATTGTTTTCATTTGCTATCTTTTTTGTGTGTCTTCTTGTTCTA TTTTTATTGTAACAAAATATTGAGTTTATTTTAGGCAACAATCCAGTTTGCCTCGTTTGTATACAAACAT TACAGGAGTGTTTATTTGATGTTAAGTTGTGATAAACAACATGTTTTCTCAACTTAACAAATTCTCCAAG AGTTCTCTACATGATCTTGCTGGGAATTGTATGGAGGTTGAACAACTGTATTTTTGATGATGCAAGTAAA AGAAAGACATCAATTGTTATGTTCTTCAAATGAATGAAAATTCTTGACATGGTAGGAATGCCTGTGTAGT TTCAAATATTATTTGTGTAAACTATGTGTGAGGATTTTAAAGAAAGATAATTTATGTTCTGTGTCCAAGA TAAAAACCAGGGCACAGACTTCAGTCAAACTTTTATCTCTGAGCAAAATAAATGAGGCATAAGAAATGTT GCTGTTTTATACAGATGAAAGAGAGTCTAAGAGAAAAATATGAGTGGAAAATACACAAAGATGAATATTA TTGAGAGAATAACTTGATGACACATTATGCATCTGCACAATATAATGATTCTCTGCTGTTTATGATGAAA AGTGTCTCAATAAATGAAAAGAAAGTTTGTTAAATCTTGA
Load query from file:
Options
E value
0.1 (Default)
10
1
0.001
1e-5
1e-25
1e-50
1e-100
Number of alignments
25
1
5
50
100
Word size
Default
2
3
4
5
6
7
8
9
10
11
12
13
14
15
Default = 11 for blastn, 3 for all others.
Matrix
BLOSUM62 (Default)
BLOSUM45
BLOSUM80
PAM30
PAM70
Gapped alignment
True
False
Automatically set to False for sequences longer than 4500 bytes
Filtering
On
Off
BLAST time is limited to 30 seconds
