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BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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BLAST
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Blast program
blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database
Database
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
FASTA query sequence
>XM_030980048.1 PREDICTED: Strongylocentrotus purpuratus vasculin-like (LOC115918469), transcript variant X2, mRNA AAGAGCTAGCGATAACATCCTCCATGTTGCTTTGCTTTATGCCAATGCATGCTCGAGATAGGAAAAACCA CACAACAACAAAACGCGGAATTGATTGAATATTTTTGTTTCACTGACGATTACAGTTGAACACTTCATCG ATATACTACAAATTGACCAGCTGCTGATTCTATAAAATATTTTCACCCATTTAAGCTGAAAGAAACCAGT CGGAAGATTTTTTGAGGTAATAACATCCATTTTGGTGAACAAATTGACCCAGCCACTCGCTACTCAGAAG TCAACATTGAGCTGTAAAAGTGGATCATCAATGCTGAAGGTAGCAGGCATATATTCTATCTTCACTCTGA CAAGAAGTGGAAAAGAAAAGATGGCTGCATAATTAGAGCTCAACTCAACGCAAGCCATACGTTAACCAGC AAAGTATTCCATACCATCCCATTATTTTTCAAAAAGTGCTAGCAGAAAGAGATATGGAAGAAAATATATA GGCTTTTCCTTGCTCTCTAGAAGATCGAAGCAATAATAATCTTTATTTAGTTAATTTTCTCAACTTGATA TTGCACAACAGCTTGCAGAAGATGAATTGACAGTGGTCTTAGACAAATCAGAATAGTCGTTGTTGGATAT AATCAAGAAATATCACCAAATTGTATAGATTAAATACAGGATGCTAAAGTTGTGAAGTCGCAAGCCGACA GATATGAAATGCTCATAAAGGAAATAGATAGTTATCTTAAAAGTGTAGTAACCCTTCAGCGATTCGATGT GAGCTGACGCCAATCCCAACATCATTCTGCTTTCAGTCAACTGTATTTTTGCGAGAAAAATCCCTCGTCT TCCATTTTTTCTACAAACTGATCCTTGATCCGGACATTAAGATGGGGAGGTAACCAAAATAAAAGTTAGT TACATTGTGTAGCTGGACGTGTTTCCAGACTATTTCCTTCTCCAGTGTGAGCGAGAAAGAAATTGCTTGT GCCTGATAGACTGATCATTAGCTGAGAAGCCAAAGGTGATAACTGGTTTTTCCTGCGCTGTTCTGCTGAT TCGTTCTCAGGCCAGGAGGACCAGTATGGTATGCCAGTGGCTACCATGGCCAACCCTCCTGAGCATGACT TTGCTCCATCTTGGCTCAAGATCCCCAATGACAACCAGCTTATAGCGAAACCTCATTCAGACCATCACAG AGCAGGCTCTAAGTACCCCTCCCCACACCCTGATGGGGGTCGGCAGCGTAGCAGACACCCCTCCAACGAG TCCTTCCCAGGCTTCCCTCCTAACCACACCCAGCAACCCAACATCCATGGATACCGGAGCCGAGATGAGA AAAGATTCCGACCAGGACCCCGCTACCACTCCCTAGAAGACCCCCTGCGTCACTCAGAGCTTCCCAGCGC TTATGCACCCCTCAACCAGAACAATGGCTTCCTTCCCCCACCCCCTTCCATGGGCTACTTTCCCTCTTCT CTGGACTATAGTTTCAACCCTAAGCGTGGCGGACCTCCGCCCCTCCACCACAACCTCAACCGGCTCGACC CTCACGGCTACCACCATGGAGGCAGGAGCTACGGTGGTGGTGATGGGGGGCGTGGTCGGTACGGAGGAGG AGGCAGTAGGCATGGGCGTGGCGGAGGCGTGAACGGCAAGGCTGGTCCTGAGAACGGGGAATCTAATGGT GAGGAGAATGGAGGGGGAGGAGGAGTTAGGAAAGGTGATGCAGCCAGTGCCAAAGGAGATGAAGGGAAAA CAAATGGAGACAAAAGTGCCTTATCTAGTCATGACTTTCCCTCATTATCTGGCGAAGCTAACCGTGAAGT CAAAAAGGAATCCTCAAAACCTGCTGGAGCATGGGAGAAACGGCCGGGTACCTCCAACATCAGCATAGGC GGCAAGAAACTGCAACTGGTTCAGAAATCAATAACAGTCAGCGACTTGCCAACTACCAATGGCTCCCAGC CCACAGCAGGCAAGATGTCACCCTCTGGTGTCAACGGTGTAAGCAACCTGACGTCGGGTAGCAAGGTGGG TGGGATGCAGCAGGCGGTACAGAACAAGGGTGCCAAGACAGGGCGTGGGGCAGTGCCCCTCTCCTCGGTC AGCTCCGGTGTGTACAAGTCACTCGTCCCCAAGTCCTCTACTCCTACAAAGGCCACCACACCAAGGAAAC CCATTGCGAAGGAAGTGGTTATCCGCCCAGCTCCTGTCATCAGTAATAAAGACAAGTCAGCACTTCCTCT CACATCATCATCCTCATCATCACCATCACCGTCATCATCAATGTCCTCCTCCACCTCCTCCTCTTCATCC ACATCATCGTCGACGTCTCTGCCATCGCCGTCGGGAAACGCAGCTTCATCACAACCTTCCTCCAACCCTC CAGTGAAAGAGCAGGGCTCTCCGCGCTCCACCTCTGCCATAGACATTCCCACCCCTCGCATGGTGACTGT GTCAAAGGTCAAGCGGACGGACAAGGTTGACTTCCTGAAGGAGCTGCGTCGCACCGGGAGCGTGGACTCT CCAAGGTTACCGCTCAGCAGCGAGCCTCTGGTCAATGGCATTGACCACTACACAAACAACCACAATGACC AATCTGGTCACTATCACAACTACAATAGGTCTTCCACCAAGCAGTACGAAAAGACAAATGCTACCACGAT TTACCAGCAACCAGACCCCTTTGAAGATTTAGACATAGTTGAGCCTAGACAAGATACTATAATCAACAAC CAACTACCCATCAGCAAGTGCAATGGCCATTACGACAATGAAGGCCAGAATGACAAGGACGTCGATGACA ACCTTGACTTGGTCACCAACAATGGCCGTATGGACATGCCCCTCAACGAGCAGAACCTCCTGGACTGTCA ACCGATGGAGCTTTCCAGTAGTTTAGAAGCAGAGAAAAGGTTACTGCAAGAGATGGGTTGGCATGAGCAC AGTGACAATGAAGAAGGATACGCACCGATCACTGAAGACGAACTCAAGGAGTTCAAGATCAGGTCACAAC AGATGGGGAAGAATGGTTTCAGTCGACCCGCTCAGCCCATCATCCTCAACCTCATCCCTCATCCTGTCAT GAACGCCATGACGACCATGGCAATCGAAGACGCAGAGCTCAGCTCCTCCTCCGATGAGTCCTCGGATGAT GATGACTTATAGTAGCGGCTGGCCTCTCCTTCAGTATGAACCGATCGGTGGTCTTTCTTACGTAACGGAA CAGAACATTTTGCTCTTCATCGTCGACGAATCAGTGCTTCTCTCTGATGCAAATCCTTGCAATACATCCA CGATAAATAACTCTGTGCCTCATGAATGCAACAGTATTTTGTGTTCATACAGTTTGTTCGGTGTGTTTGT TTCATCTTCTGGAAATCGATGTTTGAAATATTGATAGGACAGGAGCTGTGCACCTTTTTCATTACTAACA ATGAGGTCAGAAAGTGACAGTGGTTCAAAAACAATCGAGTACTGAAAGATCATATCTCAACTGGTCTTGT TTGTTTTTTATGAGTGAATTCCACTTCATGATAACCACTTTCAGCAGCAGTGGAAAATATGTTTACAAGT TGATAAATGAAAAGAATGTTTTGCACACATGCTCACCTTAATACATGCCCACGAAATGCTACCAATTTAT TTCCCATGAAGGGGTTCTTTCAGTTACAAGTTGGGCAATATAATTGTAAAACGGACCAGGTATGTTTGAT GGTATTTTGTTAAGGAAAAGAATAATAGTGAAAATAATTTGCCTTTTTGTAAACATTGGCTCTAAATACA AGCTTTACAGAGCTGTTTATTTTCATTAGTGTCAGGTGACTCATGAACATGTCATGTGACTTGGATGGTA ACTTATCCTTTCTTGGGCATATCACAATAGACTGGTACTCTCACCTACTATCAAATATTATCTTTCTGTT TACCATTCAAAATATCAGGATGTAGCTTGTTATTTAACACAATCTGCCAAAGTTTACGGCCCCTGTTCAC TTTGCTTACAGATGAAGAAAAGCACAACGATAGGAAAAAGTAAACAATTATAAAAAAAAAAAAGGCTTCA CTTCATTTGTACCCCTCACACTTTTATGGATAGATTAACACAATCTGCTAAAGTGTAGTTTGTGCAGAGA ACAATGTGGACACAGATTGTATTTTCTAGTTTTGTAACATATTTTTCCCCAAGTGCTTACTTTTAATGTT TGACAAACATTGTCATCATTTAACTATGTTTATATGAAGAAAAGGAAAAAGAAAAGATGAAGGGAGCAGA GAAAAGACAAAGGGAGTGAAAGGAATCATGTTGTATCTTCCAAGAAAAAATCTATATATATATATCATAC TTGTACTTCCAATCATACGGTGTGTCTTTTTTGTACTGAAACAAAAGTTTTTATTGCAATTTTTAAAATG AACCATTTTTCTACATCAATCTGATTTCTTACTGATCTCTTCGTTCAATTTCTGCGTGTTTTCATTCATG GATCATACGTCTGATTTTTCACTGATCTGTTTGTTGAATCTCTCATTGTTTGCATACATCAGTCATTTTA TTCAGTGTTTTTCATATTATGCCAACAAGTTTTCCAGATCAAATAGCATTTTGTCTGCAATAATACTATA AAACTGGAAACGTTTGCAAGCTCGAGATGTTCACGAATTTCAACCACAACTAACACAACGCTAATTTTGT TGGCGATTCACAATAGTTTCTGCTGTAGAAATCTCTTATCGTTTACAATTTGTGACAGTTTCCGGTGTTA AAGTAATATAGGGTATTTTATCTGTTTGTTAGTGCTTGTAAAAATGCACTTTGAAGTAGAACGCTTATAG GTTGTTTTGCTTACTGATATCAAGCTTTGTTTACAATTTTGAGCAAAAAGTTCACCCCCACCCCCACCCC CCAGAAAAAGTACAATTCTCTGTGAGGGCTATTTCAGTAGATTGAGTATCTTCTCCCAAAACTGTCGGAT GAGTCGCCGCTTACATCCTGTTGAAACGCATGTTATGAAATTAATAAGTGTTTGCACTTTCAACAAGATG GCGGTGAAGTTGAGACAGCCGTCTGGGGTCAGATTGCTGAGAGCTCCTGCATTTTCAGTTGAAGACTGGT ATCCTCTGATTAGGAGGGGATATTACTAATAAAAGCATTTTATGAATGAGATAAGTGTTTATTCTCTTTT TATTTAATTCAAGAAAAGGGCAGTTTATGGTTTAAAACGAAATCCGACCCATGCTAGAAATATATTAGTT TAGATTAGATCACTTTATTGCTATCCCAAATTCAGAGCAAAAACAAATTAACTGATTTAACAGGATCAAG TCGCACCTTTATGCCCTGATCTCTTTAAAATTGGAATCGATTGATATTGCATATTGCCTGTGTGATAAAA CTAATGCACCTTGATAATAAATTGAACACAGGCAATTTACAGTTTCACATCAAGAGCAATTTGTTTTCTT TTCATGTAAAATATTTGTGTGTGGAAATACCTTGTTGCCAGCTTACACAAAACGATTGAAGTGTCTTTCC AAAGAGTTTACGCTTCTTACAGGAGACACAAGATGGATGAGAATAAAGGAAAATGTGTAAATCCATGAGA CAAATAGGAAGAGCAGAATAGGTTACACTGAATTATGATGATTTTAGAGGAGAACTGACCGCCTAGATTG TTATCTGAAGCAACGTTGAGAGGACTATGTTGGTATAAATTTATTTTTTTGTTGATGGATTTTATTCTTA TTGTGTCTTACCAGTGATTCTATCCAGATGTGCTTTATTGTAAAGTAATAATTGTCTTTGGTTTTGTCGG ATGAGGAAGTACTGATCTTGCAGATCCAATTAACATTGAGGTACTCATGGATGGACATTAAACCGGGAGC AATTTATGGAGCCTTATAAACTAAATGAAATGGTCAAGCTGACCTATGACATATGATTTATTTTCCAGAA ACATGTGTATATTTTTTCTTTTCAAATGCTATTGTGTAGAGTTTATCCGGGAAAATGTGAGATTTTGGGG GCGTTTTTTCCTTTTTCTGCTGGACTTACTTGCTTCATTTTTTATTGTCAAAAAAACTATTTTCATTGTC ACCTCATTTTGTTATGATAGATTTGTTGTTGTTGATACAATCCCAGAGTGATTCCAGTAGACACTGAGGT TGTGTGTTGGACACAGAAAGGACTAACTGTTCAAAGATTCAAAAGCCCTTCTTGTACTCATGCTAACGAC TTCTAACAACGTTTATTTACGCTCATCATTAAGCAAGTCTTCTTGTAACCAGCAATACCTTTTTTTTGTC AGCAAGTCTTGGACAAAGCTCTCTCCTTATTTGCATCAAATCATCACTTTCAGTTTAGTGTTGTATTTGA CATTTTGTTTACTTTATACGATAACAACAACAACAGAAGATTAGCAATCGAAGATCTAAGACCATTGACC ACATTCAGAGTTATACTTACATTCAAATGGTTGGTGTTTTGATCTAGAAGTATTGCCAAGTTATGATGTA TTTAACGAAAAAGACCTTTGAGAGGCAAATAATGAATGCTTTCACCATTTAAACTTTGTTCAGTTCAAAG CTATTTGTTTTGTTCCTTTTTCTGTTTAAGGCATTGTTTTCATTTGCTATCTTTTTTGTGTGTCTTCTTG TTCTATTTTTATTGTAACAAAATATTGAGTTTATTTTAGGCAACAATCCAGTTTGCCTCGTTTGTATACA AACATTACAGGAGTGTTTATTTGATGTTAAGTTGTGATAAACAACATGTTTTCTCAACTTAACAAATTCT CCAAGAGTTCTCTACATGATCTTGCTGGGAATTGTATGGAGGTTGAACAACTGTATTTTTGATGATGCAA GTAAAAGAAAGACATCAATTGTTATGTTCTTCAAATGAATGAAAATTCTTGACATGGTAGGAATGCCTGT GTAGTTTCAAATATTATTTGTGTAAACTATGTGTGAGGATTTTAAAGAAAGATAATTTATGTTCTGTGTC CAAGATAAAAACCAGGGCACAGACTTCAGTCAAACTTTTATCTCTGAGCAAAATAAATGAGGCATAAGAA ATGTTGCTGTTTTATACAGATGAAAGAGAGTCTAAGAGAAAAATATGAGTGGAAAATACACAAAGATGAA TATTATTGAGAGAATAACTTGATGACACATTATGCATCTGCACAATATAATGATTCTCTGCTGTTTATGA TGAAAAGTGTCTCAATAAATGAAAAGAAAGTTTGTTAAATCTTGA
Load query from file:
Options
E value
0.1 (Default)
10
1
0.001
1e-5
1e-25
1e-50
1e-100
Number of alignments
25
1
5
50
100
Word size
Default
2
3
4
5
6
7
8
9
10
11
12
13
14
15
Default = 11 for blastn, 3 for all others.
Matrix
BLOSUM62 (Default)
BLOSUM45
BLOSUM80
PAM30
PAM70
Gapped alignment
True
False
Automatically set to False for sequences longer than 4500 bytes
Filtering
On
Off
BLAST time is limited to 30 seconds
