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Echinobase
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_038189846.1 PREDICTED: Patiria miniata GTPase-activating protein and VPS9 domain-containing protein 1-like (LOC119720230), transcript variant X2, mRNA GCAAGTCGTTAGGGGGCGTTTCGTTTTAGTACATGGATCGACATGATGGCGGATAAACAGTGACAGACGG CGACAATATTCCATCAATAAATCCTGCTTTTCCCTCATTTAGATGCTACATCCCCTGCGTTATTATGTAT TTAGTTTTCTTGGTCGTATGAGGAACTGATTTGGAGCCATAAAATTGGAAAAATGCATACTAATGAGGTC CACACATGTACATGTACATCAAGCTTTAAGGGATTGAACTCTCGTTAATCCCCTATCCCTACAAGTCATC GTCTAGTGATTGCCACCATGGCCACAAGCACCTCATCAGCATGTCGCGAGCTCATGGAGCTGGCCCGGCA CCTCAAGCAGGAGCACCTCTTTGTCTTGTCCGAGAAACAGCTCTTGGTCCAGCTTCACGAGGAGGTCACC CAGCTGGCGGACAAGCTCTTCCGGGTGTCCTGGATTACGCAGCAGCAGCGCCAGACCCTCAACAGCCTGA CACTGACCAGGGTGGAAGCCCCGCCAAACTACTGCTGCCACCGGGCCAACGCTTTGGAGAAGTGCTCCTT CGTCGACAGCTACAAGCATCTGGGCTTCCAGGACGCTCTGTATGGGGAGTTCCTTGGGTACCTGCGTGAC AACCCAAGAGTCGTGGCCTTGTGTCTCGTCCTGGGGGAGAAGGAGCAAATGGAGATGACCAGGGGAGTGG TCCGCTCCGTCATGTCTGCAGTCTACGGCAATTGCATCGTGCAGGAGGACGAGCAGCAGGTCTTACATCT GCTTCAGTATCTCATGGAGCAACAGTTAGCTAGCGTGGACGATCCGCGACGGTTGATCAGACGCGGGACG TGTGCCATCAGCTATGCCTTCCGACTATTCACGGAAGGTCTCTTCTCAACCAGGCTGTACCTGACTGCAG CCCTCCACGAACCTATCATGTCTGTCCTAATGGACGACGATGTCCAGTTAGAGACCGATCCTCAGAAGGC TTTGGACCACTTCACCCCGGAGGAACGGGAACAGCGATTTGGCACTCCGGGAACGGAGGAGTACCGCCAG TGTCTGCAAGCTCACCTGGAGTCCATCATCACCCAGCAGGTGTCTATGTGTAATCGCTTCATCAACGGGC TGAGGAATAACACTTATTGCTTCCCGCAGAGCCTTGACTGGATCATCACCCAGCTCCACAAGATCCTCAT CAAGTCTGGGCGGGTGGAGCCATCGGAGGTCAGAGCCACCTGCGCAGACCTCCTCATGAATTTCTTCATT TGTCCGGTGATTGTAAATCCGGAATCCTATGGCGTCATCACGGACATCATGATCAGCTCAACTGCTCGAT TCAATCTCATGCAAGTGGGAGCAATTCTACAGGGTCTGGCTATGGAGACCAACAATGGCTCAACTACACC AGCACAGACCAATGATATCTACAGCAGGTTTCCAAAGGGTTGTATGTCTTCATTCCTGGACACACTGATT GACAGCTTGAGCTCATCGGACACGCCCCCCGGCGTTAGTCAACTGCAAGGGATGACCAGGACCTGTGCGC TGATCACCGAGTCGGAGATACATACTATGGTGTCATTCTTTCGCATGGTATCCACAGCCAACCCCAATGA ATCCATGCTGAAGGAGCTGGATACCCTTTTGTCCAATCTTCCCCACACCTCTGCTTCCACGCCTGGGGCT AGCGTCACCCCTCAGATTGCCCTTTCACCCAAGGCCCCCAGCGGGCATGGGCCCATCGCCAAGAAGACAG GGTCGAAGAAATCCCACGGCAGTTCAGTAAAGACAAACCAAAACACCCAAGACGAGGATGAAGGGCTGGA CACATCCTTGACGCCCGATACTCCACCGGTACCCCAACCAGAGGATGTGCTGGTGGTGACATTTGGGACC CAGGGAAATGAATGCCCTGGAATGCTCTCTGAGGCTAAGGTGTTGAGTTCTAATCCCTCCCGCCCTAAGC CCAAAATCAGTCCCACGGCAGCCCAGAGCAGTCTGGCCGCCATCAGTGAACAGCCAGAGAAACAGCTACG ATTCTCAGACGATGCCGATGCGTCGGCAAACAGTGACCATCTCATGGAAGCTATGTCTATAGTGGCATCA GAATATTCCATGGATCTCGAGGGCGAGATGGCCAGCAACTTGAGCGGTCGTAACACTCCCCGGTCAGCGG TCAGCTTGGGAAGCAGCTCGACGGACCACAACCGTCCCGACTTGATCGACTCCACCCAGCTGCCCAATAA TGCCAACATCACGGACCGCTTTGGCAAGTTTGAGATCGGCGACGCCCTGGAGAAGAAGAAAGCACAGGGA AATCCTGAAACCTTTAGCGAGACCTGGAGCACGGAAGTCATCGGCAGCGACACCTCGGAGCCTCCCTCGG AGCCCAACACCATCGAGCGTCTGCAGGAGATAGCGGAATCCCAGGAGGACATTGAGCTGGCCGGTGCCCA GGCCGCCTCCCTGCTGGGCATCAGGCACTCGGTACCCGACATCTCGGAGACGGCCAGCGAGACCTGGAGC GTGGACGTCCTGCAGAGCGACTCAGAGCGCACGGAGGACAGGATGCAGGAGGTGGAGGATGTGGCTCACG AAGAGGCTATCCAGGCTTCCCTGTTAGAGGCCGACACCGACAGGACATCATCCAAAACCAGCGATGGACC CAGCTCAAGACGCAGCTCCTCAGATAGCCCAAGTGTGGAAGATGGGGCCAACAAGAAAGATGCTAGCTCA GATGCCACAGAAGACTCCAGCAGCCACTACTTTGATCCCATGGAGGATCCATCCATGCTGAAGGGTTCCT CTCCCGTGGGACAGTCAAGTAGTTCTTCCTCCCAATCCAACAGTGACCATCAAGAGGCCTTCCCCAAGAA GCCCCTCCAGCAGGACGAATTCCCTCTTAGACGCTCCTCTCCCCTGGTCGAAGACAAGCAGAGAAAGCAA CCCAAGGAAGGTCCTCTGTCAGACAGGCCCTTCCCTGGCTTCCTGAGTCAGTTTGATCCCGTTGCAAACG GGAACAATCATACCCTGAACAATGGAAACGAACCAAGCAGAGTCATGTTGGCTAAACCTGACAGCAAGCC CCCAGAAGACCTTTTGCAGGATTTTGACCCCTTTTCCTCTCTGAGTCCCGGAACATCAAGCACGTTGCCA ACATCAATCGGAAGGCAAGGGGACACCCCAATGGGAGCCAAGCCAAAGAAAAGGAGCAATTCCGCTCAGA AGATCTCAGCAGGCCAGACACCGACTGGATACGTACCCTACAATGAACGTCACGGTCTGAACCACGATTA TGGCAGCCAAGGGAGGCAACAGCGGACTAATCCTTTTGATCTTGGCCATGACGGTCTTTCTCATGTCAAC CATGGTTTTTTTGAGCCAACAGCGCCGTCGTCTCAGCCAGGCCCATACCAGCCGGACCTCTTGAATAATC CATTTGCTACTATCTTTGATCCTTCGGCTCCTGTCAGCCACACGTCCCAATCGTTGTTTACTCTTCAGCC CCAGCAGCAGAGCACGTCTTACAGAACCTTGGCACTGGACACAGACAGCGGGGTGGTGTCTGGGGACTCC AGCGAGCACCTTTCCCATCGAGTTGTCAGCTCCATCAGCACTGGTAGCAGCAGCAGTGCCTCCTTCCTCA ACTCGTCAATTGAGAGCTCCACAAAACCCCCGGATTTCCTCGTTCAGATAGGCAGTCGGACATCAGATGA GTGGAGTGGGATAGATCAGGCGGAGCCCGGCAGGGTCCAGAGCTTCCCCAGCACGTCGTCAGGCTCCAGC TATGGTCTGACTGGTTCCACAGAGGTGGAACAGAAGCCAGCTAGTAGTAGTTTGTTCCAGAGGTCTCACA GCACAGATGCATCTTATATATCAGAGGAAAGCAAAGCTAAACTAGATGTTGGGGATAGTGATAAAAGTAG ATCCTGGTTGAAGAAAAAAGTCAGCCAAATACACAAAATAGCATCGACCAGAAAACCCAGCAAGAAACAC GGACCCGCCGGGGAACGGGACGACAGAGAGAGAGATAGAGACTGGGAACAGGAGAAGAAGCACTCAGAAG CTGCACAGATCATCCCAAACCTGGCCTTGGTGCACCATTCATTTAAAGATGATGGGCTGAAAGCAGCCTC GGTGCCTGAAACCAGTAGCGAAGACATTCTGGAGAAATACCGTGAGATGCGCAAGGCCCAGTCTTCAGAA CAACTGGAAAATGACCACTTGGGACATGAACTGGGCAATTTAGAATCATCCACAGAGTCCAGCGGTAGCC ACAGCGACAAGCCCGACTCGGGCGGGGCCTCGGACCAGCCCGACGCCTCGGAACCCGAAAACCTGGACGA ATCGTACGCCTTCATTGACGCCAAGCGCAAGCTGCGCATTGTCCTGCGCTCGGCCGACGTCCACAGCCTG CCCTGGCTGACCAACTTCAGCATCCCTGACCACGTAGCAGCTGAGTTAGCCCTGGGCATCTCTACTGGCT ACCCAGAGAACGAGCTGGTGGCATTCCTGAAAGTCCAGCTTGCTGAGGCTATGAATCTGCAGGACAGGGC CCTGATAGCGCAGCTGAGAGAAACCTTGAGATGCGTCCAGACATTTGACAGAGATGGCTGTCGAAGGCTC CTGGCTTGCTTAAGTGAGGACTATGAGAACCGTGCCCCATACATTGCCTACCTGGTGCGCAGCCGTAAAG GGCTAGCCGCTTCCCGAGCTCATCTCCTGCGCCTGCTGGATAGAGTGGAAAGGGATAAGGCAGTAGTCAA CAAGTATTTTACAATGGTTCTGGTGCGTCTGTTCCTGGAGAGACAGGAAAGGAGTATTCACAAATTCATT GTTGATTTCAAGGCCCTCACTGCTGCTGATGAGAAGACACAACTTGTCAAATTTTTTCTGAGGACTCTGA ACAACTGGATAATGGACGACCCTATATGGGAAGCTGCCAGTGAAACCCAGATGATTGATGCTGAAGTAGC CACAGAGCGTGCCATCATGAGCCGTATCTACAAGCTTGCCTTGTACCCCAACGAGGAAGCTGACGTCGCC AGGGACAGGGTTCTACAAGCTCACATCTACAGGCTGTCCAGAGTGATAACAGTCAATCACAAGGCTCTGC AGATCCCAGAGAAGTATGGGAGGGAGGCCCCCTGGCCTGCCGCACAGGCTGAGATCCTCAACATCAACGT GTACAAGACTCCCAAAGACAAGATGGGCTGCGTCTACCGCTGTTGCAAGGTCATCATGAACCTCCTCAGT CTGGCCAATGAGAACTCGGCGGTGGGCGCCGACGACTTCTCACCGGTGCTCATGTACGTCCTCATCAAAG CCAACCCGCCCGGTCTCCTGTCCACCGTGCAGTATGTCAACAGCTTCTACTTTGAAGGGGAGCAGCTGAG AGAGAGCGACGGGGAGGAACAGTACTGGTGGATTCAGTTCTGTGGGGCCATCGAGTACATAAAGACATTG GATGACAGAAAATGAAATGCTGGTTATACATGGGTTTGCCAAAAAAATAAACTTAACCCTAACCTTCCCA CATCCTCCAAAATCCTCTTTGCAAAATGGAGGATTATGCAGGATTGAGGTTGCATGGCAAAGAGGTGTGG CTGATTTAAGAGGATGCACTGTGTCAAGGTCTTGGGCCGGACCTTGTGTTGTTCATGCTCAGCCGCGCAT AAATGTTGGCCTGGATTTGACTTGAAATCCTCCGCACTGCTCCAGGATGTCACTGGCTCTGCCTCAACGT ATTGCTGGTGATTGCTATAGGATTTTGCAGGATTGAGGCAGTGGTCGCCCCTCCAAGGACACATTCCAGA AATAACAGAGGATTTTGCAGGATTGAGGCTGTATGCATTGTTTACATGGAAGCAATTGGAGGATTTAGCA GGATTGAGGTTACATCCTAACAAAAATGCATAGGCATTAGGGTTTTAATGAACTTAACCGAAAGAAACTT GAGATAGTTTACAACACACCAAACTTGTTAAATTTGGTTAGTTGGCTCAAGAAACTGCATCATGCATCAG TATTGAATCTCAGTGTTGAGA
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???blast.matrix???
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???blast.matrix.blosum80???
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???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds