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Echinobase
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_038189847.1 PREDICTED: Patiria miniata GTPase-activating protein and VPS9 domain-containing protein 1-like (LOC119720230), transcript variant X3, mRNA AGCAAGTCGTTAGGGGGCGTTTCGTTTTAGTACATGGATCGACATGATGGCGGATAAACAGTGACAGACG GCGACAATATTCCATCAATAAATCCTGCTTTTCCCTCATTTAGATGCTACATCCCCTGCGTTATTATGTA TTTAGTTTTCTTGGTCGTATGAGGAACTGATTTGGAGCCATAAAATTGGAAAAATGCATACTAATGAGGT CCACACATGTACATGTACATCAAGCTTTAAGGGATTGAACTCTCGTTAATCCCCTATCCCTACAAGTCAT CGTCTAGTGATTGCCACCATGGCCACAAGCACCTCATCAGCATGTCGCGAGCTCATGGAGCTGGCCCGGC ACCTCAAGCAGGAGCACCTCTTTGTCTTGTCCGAGAAACAGCTCTTGGTCCAGCTTCACGAGGAGGTCAC CCAGCTGGCGGACAAGCTCTTCCGGGTGTCCTGGATTACGCAGCAGCAGCGCCAGACCCTCAACAGCCTG ACACTGACCAGGGTGGAAGCCCCGCCAAACTACTGCTGCCACCGGGCCAACGCTTTGGAGAAGTGCTCCT TCGTCGACAGCTACAAGCATCTGGGCTTCCAGGACGCTCTGTATGGGGAGTTCCTTGGGTACCTGCGTGA CAACCCAAGAGTCGTGGCCTTGTGTCTCGTCCTGGGGGAGAAGGAGCAAATGGAGATGACCAGGGGAGTG GTCCGCTCCGTCATGTCTGCAGTCTACGGCAATTGCATCGTGCAGGAGGACGAGCAGCAGGTCTTACATC TGCTTCAGTATCTCATGGAGCAACAGTTAGCTAGCGTGGACGATCCGCGACGGTTGATCAGACGCGGGAC GTGTGCCATCAGCTATGCCTTCCGACTATTCACGGAAGGTCTCTTCTCAACCAGGCTGTACCTGACTGCA GCCCTCCACGAACCTATCATGTCTGTCCTAATGGACGACGATGTCCAGTTAGAGACCGATCCTCAGAAGG CTTTGGACCACTTCACCCCGGAGGAACGGGAACAGCGATTTGGCACTCCGGGAACGGAGGAGTACCGCCA GTGTCTGCAAGCTCACCTGGAGTCCATCATCACCCAGCAGGTGTCTATGTGTAATCGCTTCATCAACGGG CTGAGGAATAACACTTATTGCTTCCCGCAGAGCCTTGACTGGATCATCACCCAGCTCCACAAGATCCTCA TCAAGTCTGGGCGGGTGGAGCCATCGGAGGTCAGAGCCACCTGCGCAGACCTCCTCATGAATTTCTTCAT TTGTCCGGTGATTGTAAATCCGGAATCCTATGGCGTCATCACGGACATCATGATCAGCTCAACTGCTCGA TTCAATCTCATGCAAGTGGGAGCAATTCTACAGGGTCTGGCTATGGAGACCAACAATGGCTCAACTACAC CAGCACAGACCAATGATATCTACAGCAGGTTTCCAAAGGGTTGTATGTCTTCATTCCTGGACACACTGAT TGACAGCTTGAGCTCATCGGACACGCCCCCCGGCGTTAGTCAACTGCAAGGGATGACCAGGACCTGTGCG CTGATCACCGAGTCGGAGATACATACTATGGTGTCATTCTTTCGCATGGTATCCACAGCCAACCCCAATG AATCCATGCTGAAGGAGCTGGATACCCTTTTGTCCAATCTTCCCCACACCTCTGCTTCCACGCCTGGGGC TAGCGTCACCCCTCAGATTGCCCTTTCACCCAAGGCCCCCAGCGGGCATGGGCCCATCGCCAAGAAGACA GGTAGTGTGATAAAAGGGTCGAAGAAATCCCACGGCAGTTCAGTAAAGACAAACCAAAACACCCAAGACG AGGATGAAGGGCTGGACACATCCTTGACGCCCGATACTCCACCGGTACCCCAACCAGAGGATGTGCTGGT GGTGACATTTGGGACCCAGGGAAATGAATGCCCTGGAATGCTCTCTGAGGCTAAGGTGTTGAGTTCTAAT CCCTCCCGCCCTAAGCCCAAAATCAGTCCCACGGCAGCCCAGAGCAGTCTGGCCGCCATCAGTGAACAGC CAGAGAAACAGCTACGATTCTCAGACGATGCCGATGCGTCGGCAAACAGTGACCATCTCATGGAAGCTAT GTCTATAGTGGCATCAGAATATTCCATGGATCTCGAGGGCGAGATGGCCAGCAACTTGAGCGGTCGTAAC ACTCCCCGGTCAGCGGTCAGCTTGGGAAGCAGCTCGACGGACCACAACCGTCCCGACTTGATCGACTCCA CCCAGCTGCCCAATAATGCCAACATCACGGACCGCTTTGGCAAGTTTGAGATCGGCGACGCCCTGGAGAA GAAGAAAGCACAGGGAAATCCTGAAACCTTTAGCGAGACCTGGAGCACGGAAGTCATCGGCAGCGACACC TCGGAGCCTCCCTCGGAGCCCAACACCATCGAGCGTCTGCAGGAGATAGCGGAATCCCAGGAGGACATTG AGCTGGCCGGTGCCCAGGCCGCCTCCCTGCTGGGCATCAGGCACTCGGTACCCGACATCTCGGAGACGGC CAGCGAGACCTGGAGCGTGGACGTCCTGCAGAGCGACTCAGAGCGCACGGAGGACAGGATGCAGGAGGTG GAGGATGTGGCTCACGAAGAGGCTATCCAGGCTTCCCTGTTAGAGGCCGACACCGACAGGACATCATCCA AAACCAGCGATGGACCCAGCTCAAGACGCAGCTCCTCAGATAGCCCAAGTGTGGAAGATGGGGCCAACAA GAAAGATGCTAGCTCAGATGCCACAGAAGACTCCAGCAGCCACTACTTTGATCCCATGGAGGATCCATCC ATGCTGAAGGGTTCCTCTCCCGTGGGACAGTCAAGTAGTTCTTCCTCCCAATCCAACAGTGACCATCAAG AGGCCTTCCCCAAGAAGCCCCTCCAGCAGGACGAATTCCCTCTTAGACGCTCCTCTCCCCTGGTCGAAGA CAAGCAGAGAAAGCAACCCAAGGAAGGTCCTCTGTCAGACAGGCCCTTCCCTGGCTTCCTGAGTCAGTTT GATCCCGTTGCAAACGGGAACAATCATACCCTGAACAATGGAAACGAACCAAGCAGAGTCATGTTGGCTA AACCTGACAGCAAGCCCCCAGAAGACCTTTTGCAGGATTTTGACCCCTTTTCCTCTCTGAGTCCCGGAAC ATCAAGCACGTTGCCAACATCAATCGGAAGGCAAGGGGACACCCCAATGGGAGCCAAGCCAAAGAAAAGG AGCAATTCCGCTCAGAAGATCTCAGCAGGCCAGACACCGACTGGATACGTACCCTACAATGAACGTCACG GTCTGAACCACGATTATGGCAGCCAAGGGAGGCAACAGCGGACTAATCCTTTTGATCTTGGCCATGACGG TCTTTCTCATGTCAACCATGGTTTTTTTGAGCCAACAGCGCCGTCGTCTCAGCCAGGCCCATACCAGCCG GACCTCTTGAATAATCCATTTGCTACTATCTTTGATCCTTCGGCTCCTGTCAGCCACACGTCCCAATCGT TGTTTACTCTTCAGCCCCAGCAGCAGAGCACGTCTTACAGAACCTTGGCACTGGACACAGACAGCGGGGT GGTGTCTGGGGACTCCAGCGAGCACCTTTCCCATCGAGTTGTCAGCTCCATCAGCACTGGTAGCAGCAGC AGTGCCTCCTTCCTCAACTCGTCAATTGAGAGCTCCACAAAACCCCCGGATTTCCTCGTTCAGATAGGCA GTCGGACATCAGATGAGTGGAGTGGGATAGATCAGGCGGAGCCCGGCAGGGTCCAGAGCTTCCCCAGCAC GTCGTCAGGCTCCAGCTATGGTCTGACTGGTTCCACAGAGGTGGAACAGAAGCCAGCTAGTAGTAGTTTG TTCCAGAGGTCTCACAGCACAGATGCATCTTATATATCAGAGGAAAGCAAAGCTAAACTAGATGTTGGGG ATAGTGATAAAAGTAGATCCTGGTTGAAGAAAAAAGTCAGCCAAATACACAAAATAGCATCGACCAGAAA ACCCAGCAAGAAACACGGACCCGCCGGGGAACGGGACGACAGAGAGAGAGATAGAGACTGGGAACAGGAG AAGAAGCACTCAGAAGCTGCACAGATCATCCCAAACCTGGCCTTGGTGCACCATTCATTTAAAGATGATG GGCTGAAAGCAGCCTCGGTGCCTGAAACCAGTAGCGAAGACATTCTGGAGAAATACCGTGAGATGCGCAA GGCCCAGTCTTCAGAACAACTGGAAAATGACCACTTGGGACATGAATCATCCACAGAGTCCAGCGGTAGC CACAGCGACAAGCCCGACTCGGGCGGGGCCTCGGACCAGCCCGACGCCTCGGAACCCGAAAACCTGGACG AATCGTACGCCTTCATTGACGCCAAGCGCAAGCTGCGCATTGTCCTGCGCTCGGCCGACGTCCACAGCCT GCCCTGGCTGACCAACTTCAGCATCCCTGACCACGTAGCAGCTGAGTTAGCCCTGGGCATCTCTACTGGC TACCCAGAGAACGAGCTGGTGGCATTCCTGAAAGTCCAGCTTGCTGAGGCTATGAATCTGCAGGACAGGG CCCTGATAGCGCAGCTGAGAGAAACCTTGAGATGCGTCCAGACATTTGACAGAGATGGCTGTCGAAGGCT CCTGGCTTGCTTAAGTGAGGACTATGAGAACCGTGCCCCATACATTGCCTACCTGGTGCGCAGCCGTAAA GGGCTAGCCGCTTCCCGAGCTCATCTCCTGCGCCTGCTGGATAGAGTGGAAAGGGATAAGGCAGTAGTCA ACAAGTATTTTACAATGGTTCTGGTGCGTCTGTTCCTGGAGAGACAGGAAAGGAGTATTCACAAATTCAT TGTTGATTTCAAGGCCCTCACTGCTGCTGATGAGAAGACACAACTTGTCAAATTTTTTCTGAGGACTCTG AACAACTGGATAATGGACGACCCTATATGGGAAGCTGCCAGTGAAACCCAGATGATTGATGCTGAAGTAG CCACAGAGCGTGCCATCATGAGCCGTATCTACAAGCTTGCCTTGTACCCCAACGAGGAAGCTGACGTCGC CAGGGACAGGGTTCTACAAGCTCACATCTACAGGCTGTCCAGAGTGATAACAGTCAATCACAAGGCTCTG CAGATCCCAGAGAAGTATGGGAGGGAGGCCCCCTGGCCTGCCGCACAGGCTGAGATCCTCAACATCAACG TGTACAAGACTCCCAAAGACAAGATGGGCTGCGTCTACCGCTGTTGCAAGGTCATCATGAACCTCCTCAG TCTGGCCAATGAGAACTCGGCGGTGGGCGCCGACGACTTCTCACCGGTGCTCATGTACGTCCTCATCAAA GCCAACCCGCCCGGTCTCCTGTCCACCGTGCAGTATGTCAACAGCTTCTACTTTGAAGGGGAGCAGCTGA GAGAGAGCGACGGGGAGGAACAGTACTGGTGGATTCAGTTCTGTGGGGCCATCGAGTACATAAAGACATT GGATGACAGAAAATGAAATGCTGGTTATACATGGGTTTGCCAAAAAAATAAACTTAACCCTAACCTTCCC ACATCCTCCAAAATCCTCTTTGCAAAATGGAGGATTATGCAGGATTGAGGTTGCATGGCAAAGAGGTGTG GCTGATTTAAGAGGATGCACTGTGTCAAGGTCTTGGGCCGGACCTTGTGTTGTTCATGCTCAGCCGCGCA TAAATGTTGGCCTGGATTTGACTTGAAATCCTCCGCACTGCTCCAGGATGTCACTGGCTCTGCCTCAACG TATTGCTGGTGATTGCTATAGGATTTTGCAGGATTGAGGCAGTGGTCGCCCCTCCAAGGACACATTCCAG AAATAACAGAGGATTTTGCAGGATTGAGGCTGTATGCATTGTTTACATGGAAGCAATTGGAGGATTTAGC AGGATTGAGGTTACATCCTAACAAAAATGCATAGGCATTAGGGTTTTAATGAACTTAACCGAAAGAAACT TGAGATAGTTTACAACACACCAAACTTGTTAAATTTGGTTAGTTGGCTCAAGAAACTGCATCATGCATCA GTATTGAATCTCAGTGTTGAGA
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???blast.matrix???
???blast.matrix.blosum62???
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???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds