Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030974013.1 PREDICTED: Strongylocentrotus purpuratus insulin-like growth factor 2 mRNA-binding protein 1 (LOC115919790), transcript variant X4, mRNA ACTACCCACACACTTCTTTTCCCTCACACCGGAGACACATCTAAATTTCATAAATTTCCGTTCATTCCCA ATTCAAATAATCAGCAAAATGAACAAGCTGTATGTAGGAAAACTTAGCCGTGATGTAACTGAAGACGAGC TTCGAAAACTCTTTGAGGACAACGACATCCCAGTCCAAGAAATCCTGATGAAGAAAAATGGATTTGCATT TGTGGACGTTTCCAACGAAGAGTTGGTCGAAAAGGCCACCGAAAAACTGAACGGTTATCATCTACAAGGA GGGCACATCAAAGTCGAGCCATCAGTTCCAAGGAAAGCAAGAAGTCAAATGGAGAATGGATCTACAGGAA ACCAGGGGTTGAAGATCATCATCATGAATGTACCAACAAAAGTTGAACACAAAGAGATTGAAAAGCTTGC TACAACCTTTGGAACTGTCACACTTTTTGAAGCCTCCCCGTCCAAGAATGATAGTGGTACATATGCTGTG GTAGTGACCTATGAACTACCAGAGCAAGCAGAACAAGCCATCAGACAACTCAATAATTTTGAATACCAGG AGTCCAAACTCAGGGTCAAATTCAAGAATGGTGGACGTGGTGGACCAGGAGGTCGCTTTAATAACAGGAA CCAAGGAGGCCCTGGAGGCATGTACCACCAGCAACAGAATGTACCAGATACATCCAATTTCCCTGTCAGA ATTCTTGTCCGAAGTGAATTTGTAGGAGCAATCATTGGAAAGGGTGGCAACAACATCCGAGCAATCACCA AGGAAACAGGATGCAAGGTTGACATCCACCGAAAGGACAACATTGGATCATCAGAGAAGGCTGTAACAAT CTGTGGAGAGCCCCAGCAGGTGACAGAGACCATCAAGAAGATCGTTGAAGTCATGATCAAGGAAAGCAGC GAGGAATCTCACACTGATATGCCTCTGAAAGTGCTGGCCCACAATGCCCTTGTCGGTCGTCTAATTGGAA AGAGCGGATCATCAATTAACAGCATTATGGAAGATTCCAAGGCCAAGGTCACCGTTTCTCTGATCCAAGA CCTGACGGTGTTCAACCCCGAGCGTACCGTGACCATCTACGGCACCCCCGAGCAGTGCATCGCCGCCGAG GCGTTGATCAGCAAGAAGCTGCGTAAAGCCTACGAGAGTTACATCCAGAACCTCCAGCCCCAGCAGCACG ACCTGTTCCCTGGCCTGAATCACATGTCTCTCATGTCAGGTGGTATGCATCATCCTGGACAGCAAGGCCC ACCAGGACCTCACTATGGAGGACACGGAGGACCCGGAGGACCATTTGATGGCGGTCCCCACTATCCTAAC CAGCCCCCAATGAATATGCCACATGGTGGACCCCAGCAAGGTGGCGGCGGCGGCGGCATGAACCAAGAGC CTAGTGAGACGACGTACCTGTTTGTGCCCAGGGAAGCTGTCGGCGCCCTCATCGGAGTAGGAGGAAAGAA CATCAGGAACACTGCTCGTGCCTCAAACGCTACCATCAGGATTGCACCAGCTGGCAATGAAGATAGCAAT GAGCGTTGTGTGAAGATCATTGGAACTCCAGAATCTCAGTGGCGTGCTCAGTTTTACATCTACGATAGAA TCCGCTCTGAGGGAATCCTTGGCAGTGGAGAGGTTCATCTAAGGTCAGAGATTGCTGTGCCATCTCAACT TGTTGGTCGCATTATCGGCAAGAGGGGACAAAGGGTGAGGGAGCTACAGCGTGTTACCGGAGCTCGTGTT GAGGTCCCACGTCGCAGGGGGGACGGAGCTGGAGATGAGGGCAGCGGCACCCCTGAACCACCAACAGAAA GCAATAACCAAAATGGAAACAACAGTGGAGATGTAGTCGTCAAGCTGGAGGGACACTTCTATGCTAACCA GGCCGCTCAAAGACGCATCCGTCAAGCCCATCAAGAGTACGTCCAACGCCAAAACTTCCAGGGTAGACCA GGTGGCAGACGTTTCTATCGTGGTGGACCAAACAACCAACATGGTGGACCAAACCAACAGCAACAGCCAC AACAGCAGCAGCAACAACAGCAGCAACAGTAACAACATCCTGTTGCAGCCACTGGAATGACATCACCAAG GGAATTAAAAATTAAGTAACGGAAATTTTAACGTAGTAAGGGGAAGCATAAAAAAAGAGATTTCAAGCAC TGCCAAGCATTGTTAATGAATTTGTTTGAAGAAAAAAAAAGTGCAAAGAAGATAAAGAAGAAGTGAAATT AAACCATTTTACAAACACTTCAAAAGAAATAGAATTAAAGAGAAAAAAAAGATGAATTGTTAAATCTTGG CAAGTGTGTGAAGGAGTATATATATATGTGAGAGTGTGTCGATGAGAAAGAGAGAGAGAGAGAGAGTGTG TGTGTGCGTGTATGTGTGTTTGTTAGTTTGTGTGTGAAAGTAAATGACCACAGTTTGTGACAATTTAACT GTGATCATGTGCAAGAGCACACAATCTTGAACTTTGAAAGCTTATGAAGTATTTGCCAAAAGAAACATGG ACAATGTAAAAGAGATGTAACGTTGTCCTAGTAGGATAGGTGGGGTTGGGTTTGGGATTGGGATTTTTTT TTGGTTAATGTCTTGGCAGGATTATAGTAAGTTGAAGTCTACTTCTCAATTTTGCCACCCTTTCCGCGAG AAGATAAGATACCATAGTTTCCACGATGCTTTCACCATTACAACTTGGGGCCATTTAAAGTGGTCGGTTT TGAGTTTGATTGATGAAGAGTAATGAGATTGTTTTTTGAAAGCATCATGGAAATTGTAATCCCATTCATA TTTGTCTATAAACATGAATAGAAAAGGGTGGATTCTTGAAGGCCATTTCTTGTTTCTGAATTTGATATTG GACCTACCTCAGTTTTCTCTTCCAAACATCCCTCTAGGCAGTAGACCAGAAACATTTCATGCAGAAGAGT TTAAAGGGGTTAAAACCTACATTTATATGGAAAATTTCAATCGAGAAGTGACTGTGAAATGAAAAGAGTT GTGGAACATTTTTTTTTTACTCCAAATTTGCTGCTTGGGTGTGTCTAAAGATGATTGCCTTATTGTACAA CCGTACCTCAAAGTGTAATTAGGGGTTTTCTTGAATGTAGGGCGAGGTATTGAGATGGCTCTTCTGCATG AAACAAGAAATAGTCTTCAAGTTTAATCATTAATGTAACAAACCTTGACTTGTGCAGCAAAACACACAAT TGTAACTAAAGAAGGCGAATAGTTTGACCTCCCGATGATGGGGGAACTCAGAACAATCTGCTAGATATTG ATTGACTTCAAGCAAACAACATTCCGGCAACCAATTAGTTTTTTTAAATGTTAGAGAAGGATTTTCATTT TGTTTTCAGCGAGGATAATGATGCTGAGAGACATACAAACATGGGTTGGGATTTATTGTGTGTTTATTTA TTTTTTTCCCTTTTTCCTTGACTTTTCTAAATTCTTGCAGAGTTTCTCAGATGTATTGATGAAATTCTGA GATGACTGTATATTTTATGGCCAGTCAAAGTTATAAGAAAGAAAGAAAGAAAGAGAAAGAAGAGTTTATA TTTCTTACTTTATTTTTTACTTTTGATATAAAAAAATAGAAAAAAAATATGAATGAAACGGTCCAATTGA AAAAGCCAATATAGACGTGTCAACTCCTACCCACTTTTCATGGACACATGGGTTGGGTTTGATCAGGATC TGCACAACTCCTTTATTAAAAAAGAAAAGAAATTTAATCAACCCATGTAGTATTTAAAAAGCAGGGAAAT AATGATATTTTTGGTGCCAAATGTTTTTGCTTTGCTGGTATCTAATTGTTTGATGATACGAGTGGGGTCT GTTCTACCCTCCAAGTTTTTGTTAATAAATAGCAGAATAAGAAAGTGTTACCGTGTAAAGGCAGTACAGA AGGGGTCAAAGGTCATGGTGATTTTTGTCCAGGTACGCTGCCACCATAAGTCAAGTTAAAACTGTTTCCA CAACCTTTCAACATCTAAGGGAAACACAAAAGTTATTAAAAAAAGAAGAGAAAAAAAATCAACAGAAAAA TGGAAAAAGCAAAAAAAAAAGGTTATGTCAGGGCAAGAGTGCCCATCGTATAAAACAACATCGGCAGTGT TTAGTGTCTGCCGGCTTGATTTCTTCACCCATCAGTCATACACAACTCTTGGGTAGATCTATACGAAAGA AACGTGATGTCAGCATTCAATCTGGCTGCATCTTCCTAAGCCATGTGTACATCGTTTCTGTGTCTGTGCA GTCGAGTCCTACAAACGGACAACGGTTTCAGGGGACATTCGCAGAACATTTCTGTTTGACCTTGTTTCAT TTGAGGATCGGGTCTCCGACCCCCAAGTAGTCGGCTGTACCTCGCAGACGAGACGATGTAGGATGGATAT TAATTTCTTGCGCAAGTAGTCACAAGTGGAGTATCTATATATTATGTGATTTATTTTCTTTCCTTTTTGT CATGTTTCCTAGTCAATGATTGAATAATGTTGTATTTACTTGTAATTAGTAGAGAGCAGAATCGGACATG TTACAGACATGCTTAATGGGATGTAGCGCGAACCAGTTACATTGGCATGTCGTGCTCACGTATGTTTAGT CTTAACTAACAACCAACACAATGTAATGTATTAAAGAAGTCTTGATTGAGTTTGTGAGTTGAGTTAAAGC AGACTTTCTTGTATGTTATACTCACACAGACATCAAACATCACATAAGTCTGTACTCTGTAGTTTAAAAT GCATGGTAGATATTAAGAATCACAATATGTATGAATGGTTCATAAGGTTGCATTATCTGTAGAAATATAT ACCGTACCTTTTCCGTAGTGTTTATTTTAGTGCTTTTTACGACTTCTCCCAACCAGATATCTCTGTAGAT TGTGAGTGAGGTTGTGATTTTAAGAGCCTCTTTCTATTCTTATAGGGAATTGGGCTGGATCAATATGTAG CGATGCCCAGAATGATATGCTTATATACAGTGAAACTTCAAATAGGCAACCAATCAGCTGTAGGGTAAAT CTAGAAAAAATAGTCAATGCATGCAATTTATTTGTGTAGTACTGTTTGTCTTTTGCACCTTAACACTCGT CACAATGGTCTTAACATTTTGCATACCCTCATTGCCGGTACAAATAGAAGTCAAATTATACTTATATAGC ATATTTTTTTGAGCATTTCAAAGTTTTCATGAAGATTTTCTTTCGGGGAATGGATTCATAATCATTTGTG GACTGCATGCAGCTGTGCTGATGCATCCAGATTCTTGTACAGTAGTTTTCAAATACTCTTTAAGGAATTA CTATATACTTGTTATTGAAAATTTTGGAAGAGGAATTTTTCGAATGGAATATTTTGGATTTTTGTTATCT CTCTCCAATCAAATGTACATTTTTGTAGATTTAGAATTGACATTTGCACCATTTTACAATTTTTCATTCT TATGCAGTCGGGCAACCTCCACTTGTGACTTCTTGTGTATTGCCGTCGTGAAATTGATTTATTTCACGCA TCATTCATAGAATCGATCTAGCATGTTTTTTTGTTTTAAGTGATTGTGAATTCCAAATGATAACATGGTA TACGAGCATTTGGTTGATGTGAAATAATGCCTTAATTACATCTTATGAATGTTGAGTTAAAGGGCGATCC AACCCTTCAATTGTATGAAAGCATGAAAACAAGATAAGCAGAACAGTGAGAGTTTGAATTACTGATACAG CCAATTTGAAGAGCCCATACCTCTATAGTGATTACATCCGTCAAAAATTCATAACTTTCTTAGTTTTTGT CCGATTTCGTTCAAACTTTTGCCAGTCTGCTCGTCTTATTTTTCTGCTTTCCTTGGCTCCTAGAGTAGTT TGCTAGCGCGGTTGGATTTCCCTTTAACGACACAGATACACACTACCTCTACAGTAAGTCAGCAGGTCAC CGACTGACCCACGTCAATGGAAGGACGTATGACATTGCAGTATCAGCGACTGACTGCTGCATGGTGAATA ACACGGGTGTTAGATATATATATATTTCCATGTGGCACGCGCAGTCAGTGCTCAAAGCCATTCACTCTTT CATTGGTGCGGGTCAGTGGAATATTTGCTTTGAAGCTTGTAAGCAGAAGAATTCTTTACTCAGAAAACAT TGATATCGTCGTCATATGCCAATAACCCATTATGTTCATTGATTGAATCTGGAATGTGTCTTACAAAATT CTAGTTTTGTGGGTAGCATGGGGTAAATGTCTTTGATACACGACTGAATGGCTGGTCTACATTCCATCAT TCAAAAACACAAAGGCTGTATGTTTTAGTGTGTATTTAATTTTCTAAAACCAACTGCTGCTGTCGAATTA TTCCATTGCGTTCTGTTATCCGTGAAGAAGAACATTTGGAGGGAAGCCGTGATATAGTTGGAATGCCTTT AAAGGCTGAAGCCATTCATACGTTTGTTGTGTTAGCTCACATCTACCAGCGTAAGAGGATGTAAAGTTAT CGTTTATAACAAGATTCAGAATACCACTGCAAAAAAACGTTTTGAAATCATTTTTCTTGTAAATTTTAAA CTGGTTATGATCTGTGTGTTTCATTCACAGAGGTGGTTGTTGCAGGTATAGTTGACATACATGTATGAAA GCAACAAACCATCGCTTTGGAGTATGGTACATACAATGACAGTTATTGTTTCCTGGTAAGCTAGATCGAG TTCTATCCACTGTAAACCTGGACCTGTAAGGATAAGAAACTCATTTCTTGTTGAAACCTTAGGAGTACAT TGAGACATAAACAAATTCTGGGTTTTTATTCTGTTACATGTCCGGTTAACAGATTTAAATGTTGTATAAT CATAAGAAAAAAATGGTTATCTAGTAAACATTCATTTACCGCCCGTTTGCCATTTGTTCATTTACACATT TTTTTTTCTGTTGTTTCCGAAACATTGGAAATAAATTATTCAAGTTAGAAACGCC
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds