Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030975044.1 PREDICTED: Strongylocentrotus purpuratus kinesin-like protein KRP180 (KIF15), transcript variant X1, mRNA GAGGCAAATTTCGAACACAGTTTTGTTGAACCTCGCACAAACGTACATAAAATTGTACCTTATATTCAAC TTATTTATGAAATCAAAACGGAGCTGACATGAGTAAGAAACTCAAGGAACAGGCAGCAAACGATGCAAGC GAAGGGGATGCCATCAAGGTATTTGTTCGGGTGAGGCCGTCAGAGAGCCATGATGCGGACGCGGCCTTTG GGCAGTGCCTGGAGGTGCGGCTGCCTGACACCATCATCATGCACTCCAAACCAGAACCCAAGGTCTTCAC CTATGATCATGTGACCGCTGCAAATACCACACAGGAATCGGTCTTCACAGCAGTGGGAAAGAGAATTATT GAAAGTTGTGTTGGAGGATTTAATGGCACTATATTTGCATATGGGCAGACTGGTTCTGGCAAGACATTCA CGATGCTTGGGCCCTGTGAAGATGGAGATAACTTCCATCATGAAATGCGAGGGGTGATTCCAAGAAGTTT TGAGTATCTCTTCAGTCTGGTGAACCGAGAAAGAGAGAAGCACGGTGACCGCTACGAGTTCCTCTGTCGC TGCTCCTTCCTGGAGATCTACAACGAGCAGATTTACGATCTCCTGGATCCTGCCTCCTTGGGGCTCCACC TCAGGGAGAACATGAAGAAAGGAGTCTTCGTGGACGGACTGATCGAGAGGGCCGTAGCTAGCGCCAGTGA AGCATATGGTGTCCTTCAAGCTGGATGGCACAACAGGAGAGTAGCAGCGACCTCTATGAACCGAGAGAGC TCCAGGAGTCATGCAGTGTTTACTGTCTCAATAGAATCTAAGGAGAAGAAAGCAGGAGTGTCGAACATCC GAGTCTCCCAGCTCCACCTGGTGGACCTTGCAGGGAGCGAGAGACAGAAGGACACCAAGGCCATAGGAGT CAGGTTAAAGGAGGCCGGTAGTATCAACAAGTCCTTGTCTATCCTAGGCAACGTCATCATGGCTCTCGTG GACATCGCTCATGGCAAGCAGAGGCATGTCCCCTACAGGGATTCCAAGCTCAGCTTCCTCCTCAGGGATT CTTTGGGAGGCAATGCTAAGACCTACATCATTGCTAATGTACATCCCGATGCCAAGTGCTTTGGTGAGAC ACTTTCAACCCTGAAATTTGCCAGGCGAGCAAAGATGATCAAAAACAGGGCTGTGGTGAACGAAGACACC CAGGGCAACGTGATGCACCTCCAAGCTGAGATCCGTAGGCTGAGGGAAGCCCTGTGTATGAAAGGGGCTG AAGGGTCGATCCCCAGGGGACCCAGTGAATCCGGTGATAGTCAAATGTCTAATAGCAGCACGGAGAGTAA TGGGCCAGTATCAGGACAGCAGTCAGGCAGCAGCGGCGGCAAGTGGAAGAAGTATTTCTTGGAGGCTATG AGTCTGAGGGACATTGTCGAAGTCGAGAAAAGGGAGATGCGAGAGAAGGTCAGCAGTCTAGAGGAGCTGT GCAGTAAACGTGATCAGGTCATCAGCTCCAACAAGATGATCATTAAATTCAGGAACAGCACCATCGACAT GCTTCAGAAGACCAAGAATAAGGCTTTGTTAAAAGAAGACAGAGACCTCCTAAATGAGAACTTGAAGAAA GAGATTGAGCAGCTGCAGGAACAGCTGGAGCACAACCCCTTTGTCATGCGCTACGTTGTGGAGAACCAAT CCCTGAGAGCACAGAACAAGAAGCTGAAGATGATGGAGGCCGTACGTAGCGGGGAAGCCATGGCTGCAAC CAAGGCCGAGGAGCTGGAGACACTCTTCCTTGAACTCAGAGAAGGATTGTCCAAGAATCGTCGGTACAGT AGCACTCCTGTAGACGGGGAGAAAGTTCCAACGTCAACTTTGGTCATCCTTAAATCACAGATCAAGAAGC TGCAAGATGAGCTGGAAAATGCCAAGCAGGAGCACGCCGAGCAAGAGGAGATGACAAGGACGACCCGTCT TGACCTGGAGTCAGAGCTGGCAGCGTACAAAAAAGCCAACCTTGACATGGAGAAGACGCTGCAAGGAATG AAAATCAAGAACAGGATGGACCGGGACGCAATGAATGACATCCATATGCAGACCATCAAATCAATCACCA CACCCAAGAAAGTAACCTACCAGCTGCGTTCGCGTACGGTGCTCCGAACAGCGGGAGAGACACCGGGCGG GCCTGGTTTCGCTGGCTTGTCTGATAACGGCAGTCCCTTGAGGAGCCACAGCGCAAACAGTCTTGCCCCC AGTGGGGATGTGTTGGTGACTAACTCTTCGCCTGCCATGTCGGAGGAAGGGATCATTGATGAGGAGATGC CGGAGCATGTGATTGAACAGTGCAACGAGGCTCTTACCATTGAGCTTCAGAAGCTGCAGGACAAGAATGC CAATCTTCAACAGCAGTTGGAGGAGCATGAGTCACAGAAACACAAGATGTTGCAGAATAGCAGTAAATTG GATCATCAGCTACAGCAGATTACAGAGCTCTATTCGACCGAGTCCCAGGCGTGGCAGGAGCATGAGAAAG ACCTGACCACCAGGCTAGCCGAAGCAACCATCCAAATCAGCACCCTGCAGAGAGACTATGAGATGACCAG AGGGGAGGCGGAAGACTTCAAGGTGATGCTTCAAGCCGCAGACAAGGAGATCGGACAGGAGAAGAAACAG AAGAGCAAGGTCACCCAGGACTGGGACAGGGTTAGGGCAGCCCTTGATGCTCAGGTGGTACGGCTAGAGA ATGAAATGTGCGGCCAATCCAGAGAGTTGGAGAACCTAACGGAAGACAGAGAACAGCTCCAGGATGCATA CAACACCTTGCAAGCGGAGCACGAGTTCCAGCAGCAGAGGGAGGCAGACTTGGAAAACAGACTGAAAGGA AAGAAAGCCGAGATCACGCAGCTCCAAGAAGAGATACAGAAACACCTGGAGAAGCTTGACAGTGAGCGTG ATAAGAGCATGCGGTTGACTGCGGAGCTGCGGCAGGGCGACAACACCAAGAAGGATCTCCTAGATGCCCA GGAACTCATCGATCAGTTCAGAGAGGAACGGGATGATCTCCTTCACAGACTTGATACAGAGGCGCTGAAG CTATCTTCTTCAAAGGATGATTTGGAGACGGTCAACTCTGCCCTGACAGCAATTAAGAAAACTGATGTTG AACAGAAGGAAGCCTTGTCCAGCCTCATGACAGCCCTGCAGGGTCAGAAGGGAATGGTCAAGGATAAAGA AGAGCAACTAGCCAGCATGCAGATGCAATTGGAAGACACCAGGGGGCAGGTGTCCCTCCTGGAAGCTGCA CTGGAAGAAGGAAAGGCCAGCGGGGCGGGGCTTCAAAGCCAGATTGCAGCACTGGAGGACAGGATGCACG CGCAGGCTGGAGATTACCAAGAACAGATTGAACAGATGAGGGCTGATGCTATGGACGCTAATCAACACCA GAAGGAGTTACTCAAAGAACTTGAGAAACAGTCCGAGGAGCTTACTCAACTTCATAAACAGATGAAGGAG AAGGAAGAAGAATACGAAACAAAGGAATCGGAACACAAGGACACCATCGAATCCCTGGAGGAGCAGCTCG AGGAAGTCAAGACCAACCTCTCCACCGTGGTCGTCGAGCTCGATGAACCTGAATCCAAGAAGAGGAAGAT GGCCGACGCCCAGGCTATGGAAATTGAATCGTTGCGGGATTCAGAGAAGCGGTTCAAAGAGCTCTCCAGT GTGTATGACAACATGAGGGATCAGATGAATGAAGAGATCAGATCACTCAAGATGAAAGCCGATGAACTGG AAGATGTGCGCATATCCAAGGAGATCCTTCAAGCCCAGCACACAGCCCTGACGTACGAGATAGAGCAAGT TCGAAACGAGATGGCAGAAAAGGAATCATCATTAAAAGATGAGGTGAATCACCTCAAAAGAGACATGGAA CGTCAGAAGACAGTGCTGGCTAGCATGCTCCGAGACAAAGATGAAGCCGTAGAGAAGCTCTACACTGTCC AAACAACATTGGACCAAGTCAAGGCTAATGAAGAAATATTACAGGAGAACATGGACCAAGTGATGGAAGA ATTAGATAGGACATCTGCCCTTGAGAGCACACACTTCAAGGAGAAAGAGGATATCAAGTCCAAGCTGGAG GAGGAAAGAGAAGAAAAGTCAAAACTTACCAAGGACTTGACCAGATTGAAGGAAGTGTACGAAGAAGCTG AAAAGAAGATCACAGAGTTAGGCGGTCATCAAAATCCCAAGCAGAAGATACATCATCTACAGGCTGTCAA GTCTGAAAACTACTTCCTGAAAGAGCAACTTGGCAAGGCGCAGTCTGACAGTGAACAGATGAAACGCGAC TATGAAACACTTCAGAAGAGGGTTAACCAGCTCATCAGCGGAACCACCGGAGGAGGAGGCAGGAGCCACC ACCTGCATAAGATGCCTTCCACACTCAAAGAGAATAACGCAGACCAGGACATGAGCTCTGACACCATGTG AGGATGAGCTCCAATGCAATGCTTTCAAATCCATACATGTCCACAGAAAGTGCGTACACAATAGGCACAA AGGCCCTCTTTGGAAACCTGATGCCTTGATGACAATGCACCTGTGGTTTGTCTGTCCTGGAAGGGGGGGG GAGGGGTGGAGGGGCATCCTGTTGTAAGTAGCCTTTGTTGCACCAGCCCTTCACCTCCCACAAATCTCAA AAAGATGATCTTTGCGTCCATCCCTGCCTTTCGTCGCCATCTTTTTCCAGGTGAAATGAGCAAAAGAGGT TTGTGGATGCTATGACGACAGTTTTGAATGGGGGTCATTCACATATCAAGACTCAATCCAGAACGTTTCC ATCTTCACCCTCACAAGTCCCAACTGAGATCTGACATTTTCTCCAGCGACAACTCATGAAGGCTTTATTT ATTCAAAGCTATACTATCAAACCTATGGTTAGGGTTGCGATTGGGTTTTATGGTAGGTTTAAGTTTAGGT ATAGTGTTAGGTCCAGGGTTGAAGTTTAGAATTTGGTTAGTGTAGGAAATTACTGTCGAGCAACTGTCGC AGGTCTCTTGGTCATTCAGCCATCTCAACTGCTGTCCATATTCTTAAGGGATTGGGAGGAGATAAAATGG AGAAGAAAAAACAGATCACCAAGTGTCTTGCTTTTTTTAACATGTGGCTCTTATAATTGTTCAAATCTTC ATATTTAGTAGCTTGTCTCAGTTCATTTGTGTATGAATGATATGTGGAAAGGTTTTACACTGCCTTATTT ATAGTGAAATTGTAGTGTTTACATCATATAGTAAATTTAAGAAGTTTGTCAGTTGAAAACGTACTTCTCC TTACTGCATATGGCCGCTATTACACTGTAGCTCTTAATACTGATATCAGGGTCAAAGGTGCCGATCTGTT GAAGTCGCTTGATCTGCTTACATTCTTCATTTCTTTGCTCAGAATGTGGAACTGACTTTGAAGCTTCATA TATTTCTTCTATAAAACCTCATCAGAGAAACAAGTATGGTCTATGACCAGTTTAGAAGAATGCATTTCAA AGACTTCCTTTTTGCTAGGATGAATACTTTTATCAAAATAATGTCTGAGACAATCAATACCAAAGATAAT TATGTGCATGGGATATTACACCCGAAGTGCTTTTCCAACAACTCGGCGGATGTGCATGCCAGTAAAACAG AGTTTCACTAGTTTTTTAGAAGATTTAGAGAGCTATATGCAATAAGGAGAAATATAAAGTATTGGATTTT GATACATTGTGAAGGCAGACAAAAAAAAGTAGACAATCTTGTGCAATTGACTGACTTTGGTTTTTAATGC CACTATCCCATGCACGTTAAATATGTGTAGCGCTGCCTGTGAAACTAATAAGAAAGCAATCTTTGATGAT GCGTACAAACTTTGACAATAATTTTCTTGTTTCAGATATAAGTGATTGCATGCAATGACTTAAATACTAT GTTAGATGTGATTTTTTTTCTTCCTTCAAAAGTATATTCCCCATATCTTGTGGCGTGATTTTGTATGTAC AGCTATGAAGCATGATAAAGAATTAGTGGTTAATTAAATTTATATACATTGTAAATAATACATTTTTTAC TGTCATGATCATTGCTATATAAGTTTTAAAGGGATACCATTTTCTTTTACCGATTTCAATCACTATGATG GTACTAGTTTTCTTGTCAAGGTTCAAACCAAAGTGTGGTGAAATTTGAATTAAACTGATTAATCAAGAGA TACAAAGTAGAAGGATGTGGTGTACACCGAATCATGGTTGGATTACACTTAATTCATTTACTGCTAGACT TCCTTCATTCATAGTTGAACTTGATTGTAGATAAATATTTGGTTCATATCTAACTTTGATTGTCTCAAGC TTTTTAACAATGTTGATCAATTTCTAATGTATGCAGACTGCACAATGTAAATTGTACTGTATTAATTAAT TGAACTAGTTTACGACTTCTCATCAACATCGCTGAATTAATGTAATTAATTAGGAAACAAATTAATATAA TTACTGATATTTCATTTAAGATTGCCTTATGTGGAGTCAATGAAGTCCACAGATCAAGATTTTATAAAAG AAGAAGTTTTTTTTAATGTCAATTACTGAATTAAAAATCCATCCCAATTCGTTGTCAATATACAGTATGT TTTGCTCATGTCAATGCCCGTTATCATGTTTTTGGCTTAGATATATGTAATGTGTTACATCGCATGCAGC TAATGCACTTCTTTCTCTGTACAGTGAACTTTCAGTATTAATATATTTAGACTCATTCGACTCAATTGAC ATTCAAATAGACCTTTGCTAATGAAGAAATATACATAACAGGTGCTTAAGTGAATTAACAATTTAGCAAA CATTTCCCATTCTTGTCTACTTTAAAGAATTCTATTCCATGCCCATTCCCCTTGTCATTGCGTTTCTAAT TGTTTGAATGTGATAAGAAGAAGGAGAAAAAAGTGCTTGTGCTTAATTGAATCAATTACATGGGAGCTTT ATTCAATTAAATAGTAACCAAATACATGTGATAAGATCATTACTGTTCCAGAATACCCACATAGTTCATC AATTATTGAATTACATCATTTGAAGGCAGGAACCTGATGTTCCAATTATATGATATTTGAAACATAGGTG TGTCGCTCTTCAAAATTTACCTGAAGTGACTTTGAGTGGAGGGATGGGGGGAGAGGGGGGGGGGGGGGGT GATGGGAGAGAGTCTTTTGTGTCATTTTGTTTGTAAGGAGTCCATTTATAGTACATGTATTTATGATTAT ATTTGTGAATTGTGAATGGTTAGATTTAATTGTAAATATGTATATTTTCTCTGTACTATATGACAAAGTA TGTGAATTACGTCAATTCTACTCAGAGTCTAGATTTGAGGAAACCAAGACAGGCACTGATTAGTTCTATA AATATGTAGGTTCATGTAGGTAGGCCTACATGTCATTATGCATCCTCATTTTGTTACATAAAATATAAAA ACTCCTTCATTTTACCCCATTTTGTTTAATATGTACACAATGTCATGATTTTCATGAAAACGAATCTGAC TGGCAAATACATTAAGTGGCATAAAATCAGTAAGTGTCGTCGTAAAGATGGGACAGAAAAAATGGTAGAC TGCTTAATTTGATCTCACTCTATGAATTAACAAATTTACTCTTCATTCTTTCACGTCAATCCATCCCCAA GATACCATGTACATAATGTCGTAATGGTGATCGTTATAAATCTGGAGTTGGCGAGCAAGTGACACAAAAT CAATTACTGAGAAGAGTAAGGGAGAAAAGTGTGTATTGAGAATTTCTAGCCTTCATTTGGCCTAATTTAT AATGCAACACAGAAAATAAAACTACACACGCATAATATAATTATAGTGATTTACATCACTTCTGTAGATT TGTGCGTTCTTATTTCTATTTTTATATATGGGGTTGTAATGGCTAAGCGCCAGAGATTTGTATTACTTTA TACGGTTACATCACATGTTAACTCTTTGCATACTGGAACCAGGTGGTTCATACATAAAAGACTATGGAAA TGAGTGAATTCAGTAGTCGATGGGTAATTGCACTTAAATTAAGAATAATAGCTTGTCTTGGGAGAGTAAG GGGAAAAGAATCTATAAATATTATTTTTGTTTTCGATGTTACCTTTCTGGGGGGCATTTCAATAATGCCT AATTATAAGATCCCACAAGGTTCAAAATTTGAATTAAAAGTATTTCCAAAATCTATAGATTAATCCTGAC CATGATGTATGTACACTTGGACATTGCATGTTCTGTCTTTTAATACCGCCAAACCAGGATAGAAGCCTAT GTTCACTTTATTATGTAAGATAAATAGTCATGAATAAATTTTTATGTAATATAATTACTTAA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds