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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>JT118893.1 TSA: Strongylocentrotus purpuratus WHL22.16487.1 mRNA sequence AGGCTGAGCGCGTATGGTTTTGTGTGATGGCGTTCACATTCCTCGCAACTCTCTTCGATATGTTCCTATG GGTTTCTTCAGATAACGATGCTGACAGTGTGAACGCGGGTTTCTGGAAGTCAACCGGAGTGTGGTTCCCG TTCTATTTCACATTTCAGATCATCTCTTACGTAACATTTGGTTACATCATGCTTCTCATGATTTTTGGAT TTCTACACATGATTCTAAGCGAAAGACTTCAATTACACATGTTACACAAGATCGGTGTAGTGATGTCGCT TGTGATGACGATCACCCTCATCGTCTTCGTTAGCATCAGATTACGTCATCTCTGGCATTTTGTGCCCGAA CTTCTACAGTACATCGGGCCATTTCTGCAGCTGGTAGCCGTGACAGTCATGACGTTGCTTAGTTGGTTCG TTGCCGGAGGTCTGGGTACACTGCAGAGGAGAGGTATCCCGATTCGCGATGCATCTTTCTGGTATTTCTT GGTCCTAATCGTTCTTTACATCACGCCGATTTTCATCAAATCACCTTGCATTATGACACAACATCATGAG GATAACCCTCATAAGCCCCTCCTCTTTGCTCACAAAGGGGCGGAAGAGATTGCTCCTGAAAACACCAATA TCTCCTTCATGATCGCTCTAGATGACTACGAAGCCCATGGAATAGAGTCAGATGTTAGAATTAGCTTCGA TGGCATACCATACGTCTTCCATGATGAGATTCTTACTCGTACCACCAATGCCATAGATGTTTTTCCTGAG AATTACCGCCAGCCAGCAGATATGTTCACGATGGATGAGTTAAGAGAGCTCGATGCGGGGTCATGGTTTG CTAGGAAAAAGCCCTTCCTGACGGCATGGTTTGTGTCTGACGAGGAGAAAGAAGAGTTTAGTCAACAGGG GATTTTGTCCATGGTTGAGATGTTTAACATTGTGCTTGCTCGCAAGAAATCTCTCCTCTTTGACGTTAGA CCGCCCCCTAGCGAGCATCCGTATGCAACCTCATGGCTCAATACCACTATTGATGTCATCACCAAGGAGA TCGGGCTCGATCCCAGTGAATTCACCTACTGGCCAGCGCCTAACGGTCCTCACTACGTCTTCTTTATTCA ACTCTATGATAACCGAACCATTCAGAATGTCTACAATGATATCGCCTTTCAATCCGTCAGAACTGCCCTT GAGAACAACGTAACAACAAACGTATGGACAGTGAATGAGGCGTGGCTTTTCCAATACTACTGGTGCGCAG GCGCAGGTTCTGTCACGACGTCATCAGTTCACACGCTGAGCGGACACAATTCGTTAGTCTGGCAGCTGAC GCCGACTCATTATCTGATCATGTGGATCCTCTTCGATGTCGCCTCTCTTATTTGGGTCATCGTCGTCTTC GTCATTCAGATCACCCGCAAGAAGTCTAAGCGAACGCGTCGCTTTCCTATGTCTTCACTTCACTAATTCG GTGTGGATTGCACAGGCGACAGGGCCGGCGTTTGACTCGGCACACATCCGATGGATCCGCGTATAACTAT CAGTTTGTAGCTATGTCAGACAAACCTTCAGACATGTATGCATCATAAGGTTCACCCGGTAATCTCAACC TCCTATAGATTACGGCCTCACAGAGTTCGACCCATGCCGACGACCCAGTCGACATGGAGGCTTCGTTGGT TCTCGTCCCCCGAGAATCGTAAAGCTCTACGATAATTTCATATTTGCTCTGGTCTGTACGTCGTCTAAAG AAATGAATAACGAAACGCTTGTTTGAGCATCGTTTCGAACCAAAACTCGATAAAGAATCAGGGTACTGCT CCAGTCTGAACGTCATATGTACGAGCATTGTATAACTGGGTTCATAAACGCCATTCACATTGGCCTTATC AGTCAGATTTAAATACCAAAGTCAAGCAACAGCAGATACCCAATGAAGAAAATGGCATTATAGTCCAATG CCGTTTGTTAACACTATCTATTTCTTTTTTTACAATTAGAAAATGACATGTTTTTTTGCCATAAATGACA AAATAACATCAACATAAATGAAGGTTACGTTAAAAATGCAGCTTGTTTTTTGTTCCGTATTTTTTAAAAC ATTTGTTTTCCTTTGTCATAAATGTATTTGGATCAAGAGGTGCCTTTCAGGGACTTTATGGTGTATGTGG TTTTTAAGCTACTTGTAAGATACAATTTTAAAAAGCAAAATAAGTCGTTTTTATTTCATTTGATTAATAA TTCAATTACTGAGGTAGACAACTACATTTATGTGCGCGAATTTTGCCTAAAATACTATCAATAGCGTATG ATTTTACTCAAACAGTTCCATCTGCTATTTCTACTAATTAATTAAAGGGGATTTGAATTATTTAAAAAAT ACGTCCACATCTGTGTTAAGTTAATCGAATTCAACTTCAGTGATTTAAATGATTTTTACTGAAGTTTGAA GGTGCATTAATATTTTTAGAGTAATGACTACGTTACAAGCTATATATCTGTTTCAAGTTAATCAAATTCA ACTTCAATAATTGAAGTGAATTATAATGAAGTGTGATGTGAAGGTGCATTAATATCTTTCGAGTAATGAC TACGTTATAAGTTATAGTTCAACGATGACAGAATCAAGGCGATTACATATGTTTATCAACCTTAATTTTT GTATATTCACTTGGGATTTTATACAAAGGGGAAAAAAAAATCAACATTCTCATTCTTTAAAAAATTGGAT GCTATATAATTGTAGAAATGACAATTACCATAATTTTAAAACATCATGTCAGTTTAATATAATTCTGTTT TATATTCTGTATGAATATAATAACTTCTCTTTAACATGAATATTTAAGAGACACCATAGGAAATAAGAAG ACGTTATTAAAAGAAAAGGAGAGAAATGTATTTTAATATTTTTTTAATTACCATTCACTCTGCTAGATAC ATGATTAATGTTATTTCTTATGTGGTAACATTCGACCTATGAAACTAAGTGACATTTGCAGCGAAGTGTG GAGTTGTAAATGTATGAGAAGTAATAGACACTATACATTTTGTATTTTTAATTGAGTCATTTTTTTAATT GAGTTGAATGTATCGTTTTTACTGATTGTAATGTCATTTATACTTTATCATTATTATATCACTAAAATTA ACATTGTTATTTCACCTGCAATTTGTATCATTTTAATACAAATTATTATATTTATGACTGTAGTAATTGA AACTAAGGTAGGTGACAAATATTCTTTAAATGCAATTCGTCATGTAATATATTTGCTCATTTTAAGCTAA GAAACTTTTTCTTAAACGTTTGTGAATATTTTTGTACGATGATATGCTAGTTTATAAATGACATTTTCCA TGGTTCTATGATTTATGTAATGTATGAAATACATATTTTGATATTCTTGTAATCAGTTTGAGTAAGATGT TGGGGTTCGATTGAAATTAATGTAAATTGTATATGACAAGCGTAGCAAATAAACAGTTAATATGAAATAA ATATTAATAGTGCCTTACGAAATGTTAAGTCATCGTGATACACGGATACATAGCACTGATTATGCAATAA CATAGAAAATGGCTTTATTTGTTAATTGGAGCACATCGTGTGCAGATAAAAATGTCTAGTTTTTTTCTAA TGTAGTGGGTGATTTTTTTAATACTTTTGTCTTATTGCAAGTCTTTCAAATACATTTCTTGTAAATAAAA TTATCTACGTATATGATATTTGAAATTGCCAAAATGTGATGTTTTGGGGATTTCGACTGTCGAATTGTGT TTGAGAGGAGTGTGTGTGCGGTGTCAGTGTGGGTGCGTGTGTGTGTCTAATTTCATCTCTCATTATTGTC CCTCATTGGGTATACAAAGAAGTTGCAAAAATTTAATTTGAATTTATATGGAGGGGGAAAGATAGAATTA AGGGGGCAATAATGTATCAGGATTATGACTTTGGAGGATTAAGAATGATTAATTTTGAAATGTCTGTTAA AATACAGCGCATAATGTGGATAAAACGTCTTTTATATGGAGAGAAAAAATTGGGATGGAAATTGTTTTTG ATCATTGCTTACAGTTTGTGGGTGGTAGATTTATTTTTTTATGTGATTATGAATTAAAAAAGATTAAACT CGTTTTAAATATTCCACCATACTATATGGAAATGTTGCAAGCATGGCAAGAGACAAGTAATTTAAGATAT TTGGAGGGTTATATTAATCCAATTATTTTTAATAATCGGAATATATGTATAAATGGAAAAAGTATATTTG ATAGATACTCGTTTGAAAGAGGGATTGTTCAACTGAATCACTTGGTTGAGAAAGGCCATGTTAAGTCTGT TAAATATTTTATGAACCTCGGTATGAAAGGTAATAATTTGCTTATGATTATTGATATTTATGATGCGATA CCCAGGTTATGGAAGGATGATTCAGGGTTAATACAATTCCTCGAGGTTGATTTGATAAGCTTTAATACCT TTTTTCCATATTTCTAGTAAAAAAATACAGTTTGTGGATGTGGGTTCAAGAACAATTTATGATTATTTTA TCAAAGCACTGCAACAAACGTATGATTTGCAGGTAAGGGATGGGCAAAATGATTATGATTTTATAGATAA AGAATTAAAAAAAATATTTGTTAGACCAAAAATTACTATACTCATTAGAAAACAACGAGAATTTCAATAT AAATTATTGCATGGAGCCATATATACTAATGAGCATCTTCATAGATTTGGTTTTGTAGGTGATAATTTAT GTTCGTTTTGTAAGCAGGAAATAGAAACATACAAACATTTATTTTTATCTTGCGGGAGCGTTCAAAGGAT ATGGCGGGCTTTAATACAACTTTTTGAGTTAGATGAAATTAAAGATTTAGAATGGCGAGAAATATTTGTT GGGTTGGTAGGTAGTTCATATAGAATAAAAATGTGTAATACTATCATTTTAATGGTGAAGTATGTTACAT TTATGTCAAGATCGGGGGGGGGGGGCGAGTACCAACCTTAGAAAAGATGAAGAAAAAAAATTCAAGTATA GGGATGAGGAAAAGAAAATAGAAATTAAAGTGGGAAAGCTGGGATCACATTTCTTAAAGTGGGAGCAGCT TAAGATTAATTAAGATTGTTTTCTTCTTCTCCACCGTGAGCCTGTTAAAAGGGTAACTCTATTTTGCGGC CTGGATAACTTATTTAGTATATTTTTTTCTTGAGTCGAAAATGTTAGCAGACATCCACTGAGTGAGTATG TGTGTGGGTGGGTGGGTGAGTATTTTTGTGTGATGGAGGGGGGCAGGGAGGGGGCAGGATTGTTCCAGTA AAATTACCTCCAGATTTGTTTAAGTTTTTTTTGTTTGTATATAAGTGTATAACATTTACAATTGACATAT TATGTGTAGGTACTTATAAGTTTACTTTGTTGCTAAGTTATATATACTGCAAATAAGTTTGTGTTTAATT AGGTTTATGTAAAAGCATCAATATTGAACACGTTTATTTTATTCAATTGTATGTTATGGTTTGTATTGCA CATTTGGAG
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
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???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds