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Echinobase
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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Download BLAST databases
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???blast.program.blastp???
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041605697.1 PREDICTED: Lytechinus variegatus protein Shroom2-like (LOC121412919), transcript variant X3, mRNA GTCATTATTCCCACGATGGTTTATCTAGAGAGAAGTGTCTCCTGTCGGAGAGCTCGCTCAAGGGTTAGAG TATATGTATCGCAGCGGTGTTGGGGGTCATCAGCATCTGATTTCCGAGGCCCTAAGAGCCCCGATCTGAG AAAGCAAGCACAAGAGAATGCAGCCATGATGAAACAGACAATGTACCCAACAACGACAAGTAGTGCAACT TCATCGTCAATAGACCCTATGCCAAAGGAAGTCGCTGAACAGAAACCAGTCAATACCAAAAGAGTCAGGA AACGAGAATCTCAGCCTGGTTCACCGAGGCCCAAATCTTGGCACACAGACCTTAGAGCCTTGAGTCAACC AGATCTGTCCAGGATGCCTCAGCACTCCCAAAGACCCGGTGAACACTCACAACCACGCTACAGGAATCCT CCTCCAACACAATACAACCAGTTCCACAGTTCATCAGATACATCCTTCATGAAGTCCAGTTACGAAGAGA AAATAATCTACCACCCGCATGGCAGGTCCACCGGGAATCTGAATAACAACAGTGCTGAGGACACTATAGA ACCCTTGCCAGGGCATGTGCAGAAGAAAAGGGAAGCATTCGAAAGGACGATTTTGTCACAGAGCATGGAT AAGATAAATACTGACGATTATGGGGATGGGTATAGCAAGAGAGGTTTTAAAGGAAAGGAGGTGATAACGC AAGGTGTGAATCCTAACTTAAGAAATATCAGCCGCGATATTGAACCTGCAGAGACTTATCCAAAGGTTGT TGTGGCAACACATATAAACAGTGTCCAGTCAAAGGCAGTACTGGGCAGAGTACCAGAAAGTGGTGAGCAG AAAGGTCAGAAGTTTGGAGGTGCACATGATGTCAATATCTACGCTGTTCAGATGCCAGAGAGGCAGATTG CCAGTTCAGCAGATTCATCTGTCACCAGGAATTACGCGCAGGCGCACAGCAATTTGGCAGGGCATCCCCA GACAAGCTACGTGCAGTCAGCGTTTGGTGCCAACGCACATTCAACAAGTTATAATTCTTACCAAGGAGAA GTAAGGAAGGTGCCACCAGCAATACCAAAGAGAGAAGACTCTAAGACTAAGACCCAGGCGTATAGTGATC ATGTGAAATCCTCATCATGGCCGGTATCCACCATCAGTTCAGAGACCACTTGTACATTGACAGTGTGTCC AACAATTCAACCAAGTGAATTGCCTCCAGTGAAACTGATGAAGACAGAGAAAGAGCAGAAGTCACCCTCG CAATCTGCTTCACAATCAAATGTCAATCAGAATTCCAATGGTGCGATGCAAGATATTGTGGTGGCAAAAC GAATATGGATTGACGATGCTAGTGAGCCTGAATTTAACTTTGAGGACGGTAAAATTCCTAGTAGTGACAA TACATTGAATACAAATGTGAGTCCTCCATCCCCTCCTGTAAGAGACAATGAAAATGGACATTTCAAACTC AAACAAAGCAAAACCACTCGTAGTTCTGATGACAGGTTCAATACATCAGATCATTTGATCCAGGACTATC GCTCTTTCTTGGAAAAGACAGAACAGCAGCAGGAGAATCTGAAGTCATATCAACCAGACAGTAGTGTGCC AGACAATAAAAATTCAAGAGAACTTCTCATGAGAACTTGTGATTTTGGAAAAGCAACTCAGCAAGATATT GTGGAAACTTCACCGATGGCACAAACGCAACCTGCAAGAGATTCTCCACGGATATCCTGGTATCAGGAGA AGAAAAATCAGGAGAGGAGAAGACAAAGAAAACGCTCATCACTGTCCTCTGATGATTCATTGAACTTGTC AGACTTTGATCAAAATAGGAAAAATCTGGTGCAGAATCCCGCTAGAACCTGGCGCAACCCAAGTGATAGT CGGGATGAAGAATGGAAGAAGTCAACAACTTCTCAGCAGCAGCATCCTGTTGAGTCCAGGATTTCTAGCC ATTCACGACAATCCAGTGATCTGGACAATCCTAATGCTCCAAGAAAGCGGACACCAATAAGCCCATCTCT GATGGAAGAAACCTTTAGAATGGAGCCAGAACAGAAGACCTTTACTGAAAAGGTGGAAAGGACTGGAATT CGCCAGGAGAGCAGAGATAGTCATAAGTCAGGCATATTTGAGAAGAATGATGACAACCAGCTTGAAAAAA TTCAGTCAGACAGTAATCTCTCTGAAAATTCAATTCTTCGAAGATTAAAAAGGGAAGGCTCATTCAAGAA CAGTGTGAACCTTGACCCAGAAAGGTCAGAGGGTAATGAGACTTCTGCAAGGAAGATCATACCAGACACA AAGAGAGACCTTCGAAATCTAGGTCTTACTGAGAATGTATTCAAACAGGATCACAGATCAAAAGGTAATC ATTACAAATCTGGGTCTTTCACACATGATTCAAGGGGGTATTCAGCAGATCCACGCCTGATGAGAACAAC CCCAGTGCCATCATCACACCAACGCACACATTCCATAGACACATACAACCGTAATCCTCCTAGGAGGCAT GAAAGTTTTGAGCGAAGGGGAAATGCAGTTTCCCGCGAGAGCTCCTTTTCTGAACGTAATGTAGCAGAAA AGCAAGGGTACTGGGAAGCAAAGTCTCAAGAGAATGACCCGGAACGTGATAAAGGGGAACACAAGAAGTC AAAGTCGGATTCTGATCAACATCCTAAAGCAGACAAACAGAGGAAGAAGATGTCTGATCCTATCAACAAA CCCCAGAATGTCAGGAAGACATCAGATCCTGAGAACAAGCAACTGATCTGGGATGCCCTCAAAGGGTTCA TGGACTACCGACGTTCCCCACCAGGAACCAGCCCTTCCAGTTCCCGTCCGACTAGCATGTACGGCTCAGA GCAATCCCTGCATCGCAGTGAAATTCACCAATCTACCAGTTCTCTTGTCAGCGGGTACTCTAGTAGCAGA CACTACCCCCAAGATTCTCTATCAAGCATCGGCTCATCTTTTTCTTACCCATTGCACCAGCCTCAGGATT CAGGCTTTGGGTCAAACAGTGATATCTCACAAGTCCGTAGCCCACACTCACCTCCCCAAACGGGAGTGGT TTCTCCAAAGGATGTGCGTGTAGCTGCTTCCATCTCACGTATCTCTGTATCGTCTCCAGGACCACAGTAC CAGTCTAGCAATTCGGGCAACGAGCGAAGGAGAAGTCACCAAATTCAAAGACCACACCCATCCAAACACC TTACATCAAGGATGTCTGTGGACTCTAACCTCCCTAATTACCGTAACCAACAGGAAATGACGAGGTCCAA CAGGTCACCCCAGGAAAAACTGGATTTCTCACCAACTCGACAGATATCACCTTTACCATCATACAATGTC CATGTGGCAGAACGAGTGCCAATCTCTAGTCTCAAAGAGGAGGAGATCAACAAAGAGGGCGCTATTTATT ATGAATCGCTTCAACCCGAGCATACAGAGACGGAAGCAAACCAAATCTTCAGATTCCCTCCCAGTAAAAA GCCAGACCATGTCAGCAGCTCTGGTGGTCAGAGAATATCACCTAAAACATCACCTGGTCATCCTCGGGTC AGCAGCTTGACCATTGATCCGTCAAACCAAGGAGTGGACATCAGCCCCCCTCCACCACCCACGCCCCTAT CCCCTCTCGATATCAAGGGTAACATGGAGTTCCCCCCTCCTCCACCTGAGCTGGCACCCGTATCCAACAT CAAGAGGAATAGTCCAAAGCAAGAACCCAGTGAATCGACTGGAAGTCAGGGAACTCAAGAGGGCAGCATT CAACTAACTAGCACAGAGAGAATAACGCCCACATACTCAGACCGGCTGCAACAAGCACCTTCTCTTGAGG TCCAGGTAGAACCTACACCCTTAGCCAAAGTAGAAGAGACGACACCATCGATATCACCCAACTCTATCAT CTCTGGGCGATCATCACCCGACAACCACGACGTTGAGCCTGCAACATCACCACAGCACGTCCCCCGACTT CCCAGCGTCCAAGAGAACATCCCTTTCTCTGAGCATAGGGATTCCCCAGTCCCCACCCGTCCTACAACAC TTGTAGAGTCACCCATCCGTCGCAGTCCAGCAGAACCAGAGCCTTTGGACGTTGCAGAAGACGAGGAAGA AGAGGAAGCCTTAGACGTGTGTGACAGCGGGATCAATATCTTTACCAGAGAACAGGAGAAGACGGAGAAG GAGCTTAGTGAGGTCTCTGATCCTGTTTTGAAGTGGGTCCTGCAAGCACTGACTCCAAGCAATACCATCC TATCTGATCTCTTCCCTCTACCCAAGTCTAAGAGGAGTCAATCAATCGGTGGAACTGTCACAATGACCAT GGACGTGACCACACCCACAAAGAGCGAGAGTGAGACGGTAGCTGAACAGAGGAGTCCTAGTGAGTGTGTG AACCTGGTCTTATCAAGTTCCAGGTATCTTAGGATCTCCCCTGCTAAGGCTATCATCCTTCAGAGAGCTC AGACCATGAACAAGAGCGACGATCTTGGCAATAACAACACAGAGCTGAGAAAGACACAGGAGGAGCTCGT TGACCGGATCAGCAAGAAGTTGATAGACATCAAGGATCTGCAGAAGGAGGTTGCAGAGGAAATGACAAAT CTTGAAGATATGGGCAGGCAAGTAATGGACAGTGTAAAGGCGAACTGCAAGGCCAGTGAATACAACAAGT GCAACATGTACATTGCAGACATTGAGAGGGTTACTAAGCTACTTCTATCCCTGTCCCGTCGGCTGAGTAA GGTGGAGAGTGTGCTAGGTAGCATGGAGAATAGTGAAGAAGAAGAGAAGGTGAATCTTGAGAAGTTGAAG GTGACCATCAATTCACAGTACCAGGATGCCAAGATGTTGAAGGAGAGTATCACCCGTCGTCACTCCACCA TCAGCTCCATGCTCCTCAACAAGATCTCCAACGATCAGCATGACAACTTCACCTACTATACCCAGATGCT TCCTAGGCATCTCATTATGGGTCAAGAACTTGATGATAAAGTCAAACTAGGTGAGGAGCAGCTGGAAGCA CTTAGTGAGAGCCTCAAGCAGATGAGCCTGAGCTCGGATAGTGAAAACAGCAGGGACACCAATGGCAATG TCCATGGTTTCAAAGAAGAGGCTGCGATGTCGTCATCGTCGATTGGGATCGTTGGTTCAGAGGAGATCAA CTCCAATGCGACTAGTTCATACTGCTGATGATGACCCCTACGTCATAGCTGACCTGACCTTCATGCTGCA ATGTCATGTGACTGTTCTTAGTTTGAGAAGAACGCACCTTGATGACTGAAGATAACAAGAACATTGGAGA CTGTTCACATTAAGGACTGTACTTAATCAATGAGCTGGATAAGCAGTGTCCTTTACAAGGAGATGGCTTT ATGAGCTGTTATGGAAATAACCAATTGAATTGGTGAGGCGATCCAGTAGTCTTGACAACTGCTATTGTGG TAAGATACATATGTCTTGGATGGACCAGAATGCAATGTTATTTATGAAACATTGACCTGTTGACGCTTCT TCACGATCTCTGCTTGACAGAAAATGATGTAGAGGCCTCTACGAAAGTGATACTTGCAAACAGGAATCAA AGCAAGTCTAAAATTACGAGAAATTGCTGAAACGAGCAAGAGACTCACGATTCCAACCATTTGTTTCTTT GTGTGTGTGGTATGGTCATAACTTGAAATGGCAGTTGGATCTCCCAACTAGCTGGACTAGTCTTATTGAT ATAGATTTGATGCTGCCTTTATCAAGGGATTTTAAAACTTATATCGGAAAACATCATGAAAGGCTGATAA TGTGTCAAGAGCTTTAAAAAAGAAGCGCAATTGAAAAGAGTGATAGAAGCTAAAGTAGCAAGATACTTTG GTCTTTCAGTCATAAAACCCTTGGCCTGTTGATACTAATTTCAGTTATTTAACCGGGCCTACAAACAAGC TTTCTACTCTCAAACAGATTGTTGACACAAACATTTATCCGTCTTTCATATGATACATTTACATATACAC ATGAAATAATTAGTCAATTTGATATGTTTATATCATATCTATATTGGCATCAGTATGTTGAAAAATTGGC ATGGGATAATGAAAAACACTGTAATATCTGTATAGATAGAAGTGCCATATTTAAAATGTTTCAAGTTGTT TGTATTTTTTTAACTTGCAATATTTGTAAGTTTGAGCTAAGAAGTAGAAACTAATTTTTTGTATCTGCAT ATTCAGAAATGTGTTTTTTATGGACATAACACCCAACCGATGCCTTCTCTTTGTAACAATAACAAAATAG TTTGTATATTTGGAACAGGAAGCTTGTTTTCTCATTTTTTAAAATTATTTAGACCAAATAACTACATTGC TATTAGAATCATGAGCTGAAAGTGGACTAAATGAAACATTTTGTTTTCCAGTTACTGATTTCCAAATTTC TATGTAAAGTTCATGCAAACTCAAGCCGGCTTTCCTAGTATTGAATGTATTCATTTTGATTTTGCTGTGT TCTAAAGAGGTGTATTCATGTAAATCATATGAAATATTTTGTACCGCATTTTCTAGTAATTCTTTTTATC AGATACTTATGTACAAACATAATTGTCAAGTATTTTGTGAATACCAATTCTTCCCAATTCGAGGATGAAA TGCTTGCAATTAGAAATGTGATTTTTCAGTTGCATGGCGGTGGAAAAACTATTTTCTCTCATGAAAGTTT TGATAATAATTCAGCCAAATCAATTTTGTATTCATTTTTAGATAAAAGAAAAAAATAATTCACAAAACAC TTGACCTTGATCTTTCAGACCTACGTACTGTAGAAGATAACAGCAGGAATGTATTCATTTGTTTTATGAA TCTTCTCCGATTATCATTCATTCACCAATTATAATAAATCACTTAAAATACTTATCATTGCATTGTGACA ACTTATATGTACAGTGGCTGAAAGTAGCAGACATTGCAGAGCTATGAGGATTAATCAGTTTTACTGGTTA TAGATTTGTTTGGGTTTTATGGTATTACTTGTCAGTTTTAGGTTTTGTTAACAGTAACTGGTATTTTGCG TTGCGATTGTGTATGTTCGTTACCAAGGCATTCTGACACAAATATATCCCAGTTTGATATTATTCCATTA TAGAATCTCTAGATAACCATGATTCAAGTCATTTGTAATATTCATATGAATTTTGGTGTAGACGTTCATT CATAGAGATCAATTCATGCATCGTAGTCGTTTTCCATTCATTCATCCATTCTTATTTTGACAGAATTTTG TTCCTCAGAATTTGTGTGGAATAGTGCATGTCATAGAAACTCTTTCCTTCAAAAATTTTGACCAAAGTTT GCTCCCAACGGCGAGGACTTGACTGATCATGTGACTTCCCATGAAAAGGTTTCTAGGGCAATTGTAATAG GCTGTAGTGGGTTTTTTAGAAAATCAATGTTGGAATCAAGTTAGTGTTTATAATGAGCTTTAATTTATTA AAGGGGGGATCACAGGGTCTCTGTAAATACATATATGGCCTTTCTACTCTTAAGGGTATCTTGATAAAGG AATGTATTGCACACTGCTTGTGGCGCTTGATAAAGAATGAATGCCTTTTGATCTGTTATTTTGTATTCTT GTGAATTGTCTTGTCCAGTTTAAGATTACTTTTGTATTTGCTGTAACAGCTCATTTTGTAAGACGGTAAA AATCTGTATATAAATTAGTACTATTTTCTCTTTTAAAAGTGAAAAATATATATATATATATTGCACCAGG TTAACTGGTTATGCTATTTAAATACTGCTGATATATACGTATGTTCTTGAATTAAGTTAAAAGCTTTATC CTATTATACATGTAATCTAATGTATTATCAACCTTCTTTCCATAATAATCAAACAGAAGATATCAGCTAT TAAAATGTCCTTAAACTGAA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds