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BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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BLAST
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Blast program
blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database
Database
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
FASTA query sequence
>XM_030987035.1 PREDICTED: Strongylocentrotus purpuratus WASH complex subunit 4 (LOC756083), transcript variant X1, mRNA GTGGGCAAAAATTTGTACCGGATCCCGTGATCTATTTTTGCAGAGCCTGAGAATTGAAGTCTGCACATTT AACTTAAAATGACGGGAGAATCTATATCTGGTTGGGAGTTCGATAAATTTGACGACGGTTCTTTGAAAAT TGTTGGTGAGGTGCAGCTCAGGAAGTATGGCAAGTTTCTTGAAGAGTATGCCACCCAGTTGAAAGGAATT GAAGATGCCTTAGACGAATCCGTAGGGGATGTGTGGGACTTTACACTAGATCCTATCTCACTACAATACT TGCCGTGTGAACAGACTTCATTGCTGGACCTCATCAAGACTGACAACAAGGTATATATCTTCAACAAAGT CATCACTGTATTTGCATCTCTTTGTTGTGAGGTTGAGCAGCTGAAATATGAGGCTCAACATAAATTCTAC CCTGCACTTATCTTCTATGGAGAAGGAGAACCTGAGACAGGCTTGGAGGAAGGAGAGGCACAGGTTCAGA TGGGACGTCTTATGCCCTTCTTACAGGAGCTGTCTTGCTACGTGAACCGTTGCTATGAAGTTGTCAAGAA CATGGTGGACCAACTTGCTGCCTTGTACAACAATGCAAAGACTGCACCCAAGATCATTGATGTTACTCAT GTCCATTTTCTTACAACCTATGAGTACCTGGGTGAGCTCCTGCGTATCTTGATCACACTCGATGAGATAG TTGCCAATCAAGCAACACTCAGGGATCACTGGACGCTCTACAAGAGGATGTTGAAGTCGGTGCATCACAA CCCTCAGAGGTTTGGGATGGAGGAATCCAAGCTGAGACCGTTTGAGAAGCTCCTCATGGGACTCCAGGGT CAACTCTTAGATGGCATGATCTTCCAGAACTGTGTTGAGCAGAACTTTGATGACTGTGGAGTGACAGTGT CGAAGAATACCTACTTCGCCGAGGAGTTTGCTTACAATATCAGAACCATGTTTGCCAACACTGATCCAAG GATTGGTGAGGTGAATGAGACAGACCAAAGACTGAAGTATGTTGGTATATGTGGTCTCTATGTACTCCAC TATCAGATCTTCAGAGTCATCGACAAAAAGGTCTTCAAATCTCTCTGGGATGTCTACAAAAAGATTCCAG CCATCACATTGACAGCGAACATCGTCTGGTCAGCCAACCAGTTCTTACTCAAGAGTCTCTCACCTCATGT AGCTAGGTTGATTGACAGGAAGGCACAGCATCATGTCCTACAGCAGACCAGTCTCTTCTTACAACAGAAG AGCCAGAATCTACTCAAGGAGGTACAGGTGTACTACATGCAGGTGTGTTCCTGGATGGTTCGTATGGAAT CCAGTCTAACTCAAGCCAATACTGTCATAGAGGACCTCACACACAAGTGCACTCTCTTCATACATGGGTT GCTGTTTGCATACAACATCAGCAACCTTGTTCACACTGTGATGAACCTTCATGCTCACATGAACAAACCT ATGACCAAAACAGCCGTCCTTGCTCTGTGCAGACTCATCGAGATGCTTAAGAGCATTGAGCACACCTTCC ATCGTCGTACCATGCTTGTAGCTGAGTCTGTCACACACATCATACAGCATCTTCAGTTCATGGCCTTGGC GTCAGTCAACACAGCAAAGAAACGTATCATCTCAGACAAGAAGTACAGTGAGAAGAGGTTGGATGCTCTC TCTGCCTTGGTGCTGGTGGAGAACGCTCTCAATGGTCCATCCACCAAAGAGAGGAGGTTGATTGCCAATC TTTCCCTTGCTGTAGGCACTCAAATGAAATGCTTCAAGGACGATGAGCTGGTGTCCTTCAAGAGTTTGAT GAACAAGCTTGCTGCCATCAGTGACCTCAGAACAAGATTGCGGGAAGCATGTAACTGCAGTTTCCTGTAC TGGCATCGTGTAGTCTTCCCTCTCTACCTGGCAGATAGGTTTGAGAATGCAGTGGATGCTCATAGGTTAC ATTACATGATGGGTGCCTTAGCGGACTGTGTAGCACCCATGAAACAGACCAGACATCTAGACTCTAATGG AGTGCTATTGAATTGCTTTGATAGGGAAATCAATGGACAACTCAAAGAGCATCTGCTGGAGCCACTGTGC CGTGCCGTTGAGACTGATCTGCGTCTCTCGATACACAACCACCTCCAGCTTGATGATAGGAATCCGTTCA AGGTCACCCTGAAGGACATCTCACACTTCCTCAAGATGAAACCTATCAGGTTCTTCAGCTACTTCATCGA CATCAAAGCCCATGTAACGCACTACCTGGACAAGACCTTCTACAATCTGACCACGGTGGCGCTGCATGAC TGGAAGACGTATGCCGAGATGCGTAACCTGGCAGCACAGAAGTACGGTCTGGCGATGACAGAGGCTCATC TACCTACACAGACTCTGGAACAAGGTTTGGATGTGTTGGAGATCATGAGGAACATTCACATCTTTGTGTC CAAGTATCTCTACAACGTCAACAATCAGATCTTTGTGGAACGTTCCAGCAACAACAAACATCTCAACACC ATCAACATCCGTCACATTGCCAACTCTATCCGTACCCACGGTACAGGGATCATGAACACCACGGTCAACT TCACCTATCAGTTCCTTCGGAAGAAGTTCTTCATCTTCTCTCAGTTCATGTACGATGAACACATCAAGTC TAAACTCATCAAGGACTTGAGGTACTTCAGAGAGAACAAACAGGAGATGAACCAGATGTACCCCTTTGAC CGAGCAGACAAGTTCAACAAGGGCATCAGGAAGCTAGGTCTGACACCAGAGGGCGACAGTTATCTGGATC AGTTCAGGAACCTTCTCAGTCAGATTGGTAATGCGATGGGGTACATCAGGATGATCCGATCAGGTGGTCT AAGATGCTGCAGTAATGCCATCAGGTTTGTACCAGACCTGGAGGATATTGTAAGCTTTGAAGAACTGGTT GGAGAAGAGAAGCTATCACCTGAAGTCACACAAGCTGCAAGGAATCTTGACAATGTAATCGGAAACCTGA CAAAGAACTTTGCTGAGGGAACTGAGTACTTCAAGATGTTGGTGGATGTGTTCTCACCAGAGTTCAGGAA TCCTAAGAACATGCATCTCAGGAACTTCTACACCATCCTTCCTGCCTTGACACTCAACTTTGTAGAGTAC TCTGTGAGCTCCAAGGAAAAGTTGAACAAGAAGAACAAGATGGGAGCAGCTTTCACCGATGATGGGTTTG CCATGGGCGTGGCATACATTCTGAAGCTGCTAGACCAGTACCAAGAGTTTGATTCCCTTCACTGGTTCCA CTCGGTCAAGTTCAAGTACAACAAGGACAAGGAGACAGTAAGGAAGCAGATGGGAGGAGATGAGAAGCTA CATAACACAGCACAACTCACCATCAAGAGACTGGACACATACCAAAGGGAGTTTGATCTGCTGTACTACA GTTGGAGCAGTGCAAGGATCTTCTTCAGAGCTGACAAGACAGCCGCTGAAGAGCAGGAGGAGAAGATTGA GAAGGAAGAGAGAGAAAACAAAGCCATAGAGGGCGCACCACAAGAGAGACTAGCCCTGACTGCACCAGCG ACCAACAATACACCAGCTATCGCAGCACCGCCAACTTCCAACTTACCTGCCATTATGGCCAGCTAGGTTC GTCATACTAACAGGAGAAATGGCACAGCTTGCTTAGATCTGGTACATGCACCAAATCTACCTATTCAAGG ATGATACAATATACATCGCCCGTCGTGATATATAGGCTTTGCAGGGAATGAGTACCCTCTAAAATAGTAA TGAGTTTTACAAGTTAGAGTTTATCATGTTAGAAACTGCACATGTAGAAAGGGATGAAGGTAAGGCAACC TCCTTCTATAGAGTAAAATTCAGTGGAAGGGGTCAATTCGTTTATTTTAAGTTGTGCCATTATCTATCTT GTATTGCACAATGCACATGGTCCATTACCAAAACTGTATTACTTTGTGGTGGATAAGACTGCTGCATTCA TATCAATTACAGATTATAAGAGTGCTTTAACTAACAAATTTTATTGTGGCAGTTATTATTTTACCTTTGA ATTTAAAAATTTGAAAAATTACTGTATTGAAAGTGCTTTACGTCACCTTGCTTTGCGGATGTATATGATT CATACCGACAAAATATGTTATATGCTTTTACAGTTGATGAGGAGTAAATTATTCAATCATATTTGCCTGT AGAAAATAAGTGCAACTAAACTGTACCTCAGATGATCTACCGGTAAGTGATTATCAACAGGGTTGAATTT AGATCGAGTACATGGTAGTTTTATGATCAAGAAGTCTGGCATGTGAACTGTTTTTTTTACAGTTTTTACA GTTTTTGAAAGTGAAATATATGGTCACAAATATAGCATTCCTTTCTTACTGTTTAATTTAATTTGTCTGT GGAATAAGCTTCACAACGAATATTTGTAGATTTGAAAACTGAAGAGAAGAATCTCCACCAATCTTCAAGT TTTTTAGTATGAATGATATCATGTATTTAAATTGTGTTGTACAATGTTGTAAATATCAAATTTCAAATGT AACAGAGATATATAAACATTGTTTTATACCATAGACTAAATTGCATGAAATATAATCTAAAGAATGCATG AAGAAAGAAGCATTATTTAATTCTAAACTGAAGCCTGAAGCCAAATATATACTTATTGCAAGAAACCATT TATTCTTTGATATAACACTGTATTACTACATGTACTTGTGTGAAGCCAAGAAAGATTGTTTAAATCACTG GTATGCGAAATAAGAGAAAGCTCAGTATCATCCCAACAGTTTTATCTGGTCATCTGAATTTGTAGTCAAA TCAAACAATCTATTAAGTTCTGAAATATTAGACAAACTCTTTAACTTCCAAAACTTGAAGAAGAAAAAAA AATTGCCCTAAAATATAAAAATATAGTAGATGCAGAAGATTTTATCAATTTTGAGGAAGCTTTTCAAGAG TACATTGTGCAATCCACTGTTTTAATAGGGAAAATTGGTAAAAGAAAAGAAAAAACAGTGCTTTTGTAAT AGAAAGTGTGACCAAAATGAAGACATTATTTGTTGGCCATTGTATTGTTTATCACAGTAAGTTTGTTTAA GTCCATTGAAAAGGAGAGACTTTATTTGAGAAGTTTTATCGCTTTCACCCTAATGAATTTTCTTCAGAAA CATGTGTGATAATTGAGTATTTCATTGTACTCAACCACTACCACCATCCCTCCCCCCTCCACGAAAAATT CTTAATATACACAATGTATAACATGCTTACCATGTGCAACATACAGTGTATATTGTAAAGAACCACTTTG CCAATTTCTGTACGATATTTTTGTACTGGTTTCTACTCCCATTGTAATAAGTCAAGATTATGGACACTTT GATGGAAAATATGTTACTTTAGAAAGATATAGAATCTGTATTTTCAAGGAAGATGCAGTCTTTATTAAAT GCTTGAAATAAAGAGACAAATGAATGCAATCGGA
Load query from file:
Options
E value
0.1 (Default)
10
1
0.001
1e-5
1e-25
1e-50
1e-100
Number of alignments
25
1
5
50
100
Word size
Default
2
3
4
5
6
7
8
9
10
11
12
13
14
15
Default = 11 for blastn, 3 for all others.
Matrix
BLOSUM62 (Default)
BLOSUM45
BLOSUM80
PAM30
PAM70
Gapped alignment
True
False
Automatically set to False for sequences longer than 4500 bytes
Filtering
On
Off
BLAST time is limited to 30 seconds
