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BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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BLAST
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Blast program
blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database
Database
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
FASTA query sequence
>XM_030987039.1 PREDICTED: Strongylocentrotus purpuratus WASH complex subunit 4 (LOC756083), transcript variant X2, mRNA GTGGGCAAAAATTTGTACCGGATCCCGTGATCTATTTTTGCAGAGCCTGAGAATTGAAGTCTGCACATTT AACTTAAAATGACGGGAGAATCTATATCTGGTTGGGAGTTCGATAAATTTGACGACGGTTCTTTGAAAAT TGTTGGTGAGGTGCAGCTCAGGAAGTATGGCAAGTTTCTTGAAGAGTATGCCACCCAGTTGAAAGGAATT GAAGATGCCTTAGACGAATCCGTAGGGGATGTGTGGGACTTTACACTAGATCCTATCTCACTACAATACT TGCCGTGTGAACAGACTTCATTGCTGGACCTCATCAAGACTGACAACAAGATCTTCAACAAAGTCATCAC TGTATTTGCATCTCTTTGTTGTGAGGTTGAGCAGCTGAAATATGAGGCTCAACATAAATTCTACCCTGCA CTTATCTTCTATGGAGAAGGAGAACCTGAGACAGGCTTGGAGGAAGGAGAGGCACAGGTTCAGATGGGAC GTCTTATGCCCTTCTTACAGGAGCTGTCTTGCTACGTGAACCGTTGCTATGAAGTTGTCAAGAACATGGT GGACCAACTTGCTGCCTTGTACAACAATGCAAAGACTGCACCCAAGATCATTGATGTTACTCATGTCCAT TTTCTTACAACCTATGAGTACCTGGGTGAGCTCCTGCGTATCTTGATCACACTCGATGAGATAGTTGCCA ATCAAGCAACACTCAGGGATCACTGGACGCTCTACAAGAGGATGTTGAAGTCGGTGCATCACAACCCTCA GAGGTTTGGGATGGAGGAATCCAAGCTGAGACCGTTTGAGAAGCTCCTCATGGGACTCCAGGGTCAACTC TTAGATGGCATGATCTTCCAGAACTGTGTTGAGCAGAACTTTGATGACTGTGGAGTGACAGTGTCGAAGA ATACCTACTTCGCCGAGGAGTTTGCTTACAATATCAGAACCATGTTTGCCAACACTGATCCAAGGATTGG TGAGGTGAATGAGACAGACCAAAGACTGAAGTATGTTGGTATATGTGGTCTCTATGTACTCCACTATCAG ATCTTCAGAGTCATCGACAAAAAGGTCTTCAAATCTCTCTGGGATGTCTACAAAAAGATTCCAGCCATCA CATTGACAGCGAACATCGTCTGGTCAGCCAACCAGTTCTTACTCAAGAGTCTCTCACCTCATGTAGCTAG GTTGATTGACAGGAAGGCACAGCATCATGTCCTACAGCAGACCAGTCTCTTCTTACAACAGAAGAGCCAG AATCTACTCAAGGAGGTACAGGTGTACTACATGCAGGTGTGTTCCTGGATGGTTCGTATGGAATCCAGTC TAACTCAAGCCAATACTGTCATAGAGGACCTCACACACAAGTGCACTCTCTTCATACATGGGTTGCTGTT TGCATACAACATCAGCAACCTTGTTCACACTGTGATGAACCTTCATGCTCACATGAACAAACCTATGACC AAAACAGCCGTCCTTGCTCTGTGCAGACTCATCGAGATGCTTAAGAGCATTGAGCACACCTTCCATCGTC GTACCATGCTTGTAGCTGAGTCTGTCACACACATCATACAGCATCTTCAGTTCATGGCCTTGGCGTCAGT CAACACAGCAAAGAAACGTATCATCTCAGACAAGAAGTACAGTGAGAAGAGGTTGGATGCTCTCTCTGCC TTGGTGCTGGTGGAGAACGCTCTCAATGGTCCATCCACCAAAGAGAGGAGGTTGATTGCCAATCTTTCCC TTGCTGTAGGCACTCAAATGAAATGCTTCAAGGACGATGAGCTGGTGTCCTTCAAGAGTTTGATGAACAA GCTTGCTGCCATCAGTGACCTCAGAACAAGATTGCGGGAAGCATGTAACTGCAGTTTCCTGTACTGGCAT CGTGTAGTCTTCCCTCTCTACCTGGCAGATAGGTTTGAGAATGCAGTGGATGCTCATAGGTTACATTACA TGATGGGTGCCTTAGCGGACTGTGTAGCACCCATGAAACAGACCAGACATCTAGACTCTAATGGAGTGCT ATTGAATTGCTTTGATAGGGAAATCAATGGACAACTCAAAGAGCATCTGCTGGAGCCACTGTGCCGTGCC GTTGAGACTGATCTGCGTCTCTCGATACACAACCACCTCCAGCTTGATGATAGGAATCCGTTCAAGGTCA CCCTGAAGGACATCTCACACTTCCTCAAGATGAAACCTATCAGGTTCTTCAGCTACTTCATCGACATCAA AGCCCATGTAACGCACTACCTGGACAAGACCTTCTACAATCTGACCACGGTGGCGCTGCATGACTGGAAG ACGTATGCCGAGATGCGTAACCTGGCAGCACAGAAGTACGGTCTGGCGATGACAGAGGCTCATCTACCTA CACAGACTCTGGAACAAGGTTTGGATGTGTTGGAGATCATGAGGAACATTCACATCTTTGTGTCCAAGTA TCTCTACAACGTCAACAATCAGATCTTTGTGGAACGTTCCAGCAACAACAAACATCTCAACACCATCAAC ATCCGTCACATTGCCAACTCTATCCGTACCCACGGTACAGGGATCATGAACACCACGGTCAACTTCACCT ATCAGTTCCTTCGGAAGAAGTTCTTCATCTTCTCTCAGTTCATGTACGATGAACACATCAAGTCTAAACT CATCAAGGACTTGAGGTACTTCAGAGAGAACAAACAGGAGATGAACCAGATGTACCCCTTTGACCGAGCA GACAAGTTCAACAAGGGCATCAGGAAGCTAGGTCTGACACCAGAGGGCGACAGTTATCTGGATCAGTTCA GGAACCTTCTCAGTCAGATTGGTAATGCGATGGGGTACATCAGGATGATCCGATCAGGTGGTCTAAGATG CTGCAGTAATGCCATCAGGTTTGTACCAGACCTGGAGGATATTGTAAGCTTTGAAGAACTGGTTGGAGAA GAGAAGCTATCACCTGAAGTCACACAAGCTGCAAGGAATCTTGACAATGTAATCGGAAACCTGACAAAGA ACTTTGCTGAGGGAACTGAGTACTTCAAGATGTTGGTGGATGTGTTCTCACCAGAGTTCAGGAATCCTAA GAACATGCATCTCAGGAACTTCTACACCATCCTTCCTGCCTTGACACTCAACTTTGTAGAGTACTCTGTG AGCTCCAAGGAAAAGTTGAACAAGAAGAACAAGATGGGAGCAGCTTTCACCGATGATGGGTTTGCCATGG GCGTGGCATACATTCTGAAGCTGCTAGACCAGTACCAAGAGTTTGATTCCCTTCACTGGTTCCACTCGGT CAAGTTCAAGTACAACAAGGACAAGGAGACAGTAAGGAAGCAGATGGGAGGAGATGAGAAGCTACATAAC ACAGCACAACTCACCATCAAGAGACTGGACACATACCAAAGGGAGTTTGATCTGCTGTACTACAGTTGGA GCAGTGCAAGGATCTTCTTCAGAGCTGACAAGACAGCCGCTGAAGAGCAGGAGGAGAAGATTGAGAAGGA AGAGAGAGAAAACAAAGCCATAGAGGGCGCACCACAAGAGAGACTAGCCCTGACTGCACCAGCGACCAAC AATACACCAGCTATCGCAGCACCGCCAACTTCCAACTTACCTGCCATTATGGCCAGCTAGGTTCGTCATA CTAACAGGAGAAATGGCACAGCTTGCTTAGATCTGGTACATGCACCAAATCTACCTATTCAAGGATGATA CAATATACATCGCCCGTCGTGATATATAGGCTTTGCAGGGAATGAGTACCCTCTAAAATAGTAATGAGTT TTACAAGTTAGAGTTTATCATGTTAGAAACTGCACATGTAGAAAGGGATGAAGGTAAGGCAACCTCCTTC TATAGAGTAAAATTCAGTGGAAGGGGTCAATTCGTTTATTTTAAGTTGTGCCATTATCTATCTTGTATTG CACAATGCACATGGTCCATTACCAAAACTGTATTACTTTGTGGTGGATAAGACTGCTGCATTCATATCAA TTACAGATTATAAGAGTGCTTTAACTAACAAATTTTATTGTGGCAGTTATTATTTTACCTTTGAATTTAA AAATTTGAAAAATTACTGTATTGAAAGTGCTTTACGTCACCTTGCTTTGCGGATGTATATGATTCATACC GACAAAATATGTTATATGCTTTTACAGTTGATGAGGAGTAAATTATTCAATCATATTTGCCTGTAGAAAA TAAGTGCAACTAAACTGTACCTCAGATGATCTACCGGTAAGTGATTATCAACAGGGTTGAATTTAGATCG AGTACATGGTAGTTTTATGATCAAGAAGTCTGGCATGTGAACTGTTTTTTTTACAGTTTTTACAGTTTTT GAAAGTGAAATATATGGTCACAAATATAGCATTCCTTTCTTACTGTTTAATTTAATTTGTCTGTGGAATA AGCTTCACAACGAATATTTGTAGATTTGAAAACTGAAGAGAAGAATCTCCACCAATCTTCAAGTTTTTTA GTATGAATGATATCATGTATTTAAATTGTGTTGTACAATGTTGTAAATATCAAATTTCAAATGTAACAGA GATATATAAACATTGTTTTATACCATAGACTAAATTGCATGAAATATAATCTAAAGAATGCATGAAGAAA GAAGCATTATTTAATTCTAAACTGAAGCCTGAAGCCAAATATATACTTATTGCAAGAAACCATTTATTCT TTGATATAACACTGTATTACTACATGTACTTGTGTGAAGCCAAGAAAGATTGTTTAAATCACTGGTATGC GAAATAAGAGAAAGCTCAGTATCATCCCAACAGTTTTATCTGGTCATCTGAATTTGTAGTCAAATCAAAC AATCTATTAAGTTCTGAAATATTAGACAAACTCTTTAACTTCCAAAACTTGAAGAAGAAAAAAAAATTGC CCTAAAATATAAAAATATAGTAGATGCAGAAGATTTTATCAATTTTGAGGAAGCTTTTCAAGAGTACATT GTGCAATCCACTGTTTTAATAGGGAAAATTGGTAAAAGAAAAGAAAAAACAGTGCTTTTGTAATAGAAAG TGTGACCAAAATGAAGACATTATTTGTTGGCCATTGTATTGTTTATCACAGTAAGTTTGTTTAAGTCCAT TGAAAAGGAGAGACTTTATTTGAGAAGTTTTATCGCTTTCACCCTAATGAATTTTCTTCAGAAACATGTG TGATAATTGAGTATTTCATTGTACTCAACCACTACCACCATCCCTCCCCCCTCCACGAAAAATTCTTAAT ATACACAATGTATAACATGCTTACCATGTGCAACATACAGTGTATATTGTAAAGAACCACTTTGCCAATT TCTGTACGATATTTTTGTACTGGTTTCTACTCCCATTGTAATAAGTCAAGATTATGGACACTTTGATGGA AAATATGTTACTTTAGAAAGATATAGAATCTGTATTTTCAAGGAAGATGCAGTCTTTATTAAATGCTTGA AATAAAGAGACAAATGAATGCAATCGGA
Load query from file:
Options
E value
0.1 (Default)
10
1
0.001
1e-5
1e-25
1e-50
1e-100
Number of alignments
25
1
5
50
100
Word size
Default
2
3
4
5
6
7
8
9
10
11
12
13
14
15
Default = 11 for blastn, 3 for all others.
Matrix
BLOSUM62 (Default)
BLOSUM45
BLOSUM80
PAM30
PAM70
Gapped alignment
True
False
Automatically set to False for sequences longer than 4500 bytes
Filtering
On
Off
BLAST time is limited to 30 seconds
