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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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???blast.header???
Download BLAST databases
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???blast.program.blastp???
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041600171.1 PREDICTED: Lytechinus variegatus mediator of RNA polymerase II transcription subunit 13-like (LOC121408640), transcript variant X1, mRNA TATTACCGCCTAGTATTTTGCTCTATACGGTGTCGCCATTACGCTAGCCTATACGGCCTACGGATCTTTT TACTTACTGAACTATTAATAGAGGAATTTCTCACTGGAATTTATCACTTTTCTACGATCGGAAAAACAAG AGCCCGTGGATTATAGTTATGTCATGCCTGTAGTATGAGCGGAGCAAATTCAGCGGCGAATGGGGCCAGT TTGGAAGATTGTTACACCAACTTGTTCGCCGTGGCCGACTTGTCGGGGATAAAATGGCGACAGTATAGTT GGACCTGCCCCACAGAGCCAAAAGCGCCGCTGGAGGACCCTGTTCTGCGGTCTTATGCCAATTGCATCAA GGAAAACATTTTAAGTGTGTGGCGGTGTCACAACACTTTGAGGGCCGATCTTATGCTCGACACTGAGACA CCGGAACAGAATAAAGAACTGTGGATATACTGGTATGGAGATGATCCCAAGTTTGAGAGCCTTATCGTAG ATGAATTACAAGGTGGCATCCAAGCCCAGGGTGTGTGGGATAACTGCATGTCCTATGAGTGTAGGACATT ACTCTTCAAATCCTTCCACAATTCCATAGAAAGATGTCTACTAAGTGGTGGTTATGTCCGGTTAGGGAGA TGGTTCGTAAAACCATTCACAAACTATCCTATACCTGGAGAAAACCTGAGTGACCACCATTCTGTAAGTT TCTCATTCTTTCTTCATGGGGAAAAGACGGTATGCAGCAATGTAGAAGTTGGCCTGCATCAACCTGTCTG TCGGCTTACCGCTGATCATCTGGCCATTGCTCAGGGTTCGGCAACTGCAGTGCCGGTGATCCTATCCCCA TATGGCCTAAGTGGTTTCCTCACTGGACAAGCCTACAAGGCCACCCACCAGGTTGCCCAGAGGATCCTCT TTGAATGGCAGTGCTTCTACCCTATCAAGCTGCAGAAGACACCAAAAGGGGAGCGTGATCGACACCATCA CCACCACCATCATCATCACCACCAACACCATCATACTCAGCACCATCCTCATCATTACCATCCTGGGTAC AGAGAGGAGGAGGAGGACAATACCATCCCTGCAGTGGTGGAGGTTCATGTCGGGAGTTATCTAACGGATG GCTACCTTACAGGCGGTATCCGGATGCTGTATCCGAGCTGCTATGTGCTGGTACCTCAGAGTGAGTTCTC CCATCACCATGCGATGGCTGTTCAGGCTGGGGGCTACATCCCACCACCCTCCATGGGGCTAGGGCATGGC AAGATCAACGGACCTGCAACTCCTGGCTTGTCATCGGTTGCCCTTACCCCTCCAACCTCCCCTCCAGACC AGCAGCTCCCACCTGGAGACGGCTCGGGAGCCCTGTACACAGGGGGATCTACCCTGGATCCCAGCCTGGG AGATGATGGAGATGACTCCTGCACCGGAGCCCTTATCCACAAAGTCACCTCCAAGGTTTGGTCCCAGTGG CTAACGGAGACCGTCCTTCCCACACCTGGTAGTGGCGGTGCTGGTGGTACCCTGCCAAATGGATCTATGG CATCGACCCCAGGTACCATCACTAATACCAGTGGTGGTGTTGGTGGTGGTGCTGGATCGATGAGCAGCCA GCAGTCATCACTAGAACCTTGCAGTATTAGTGCGGAAGACAACAACTCAAATCTGGAGACCAAGCCATCC TTGGTGCCCCCGCCCCAACCCTCTCCCACAGCCAACCAGTTCACTTGGCAGTTCCAAGACCCTTCCTCCA AGACGGATTGTGCTTGCTCAAGGCAAAAGGTGCTGAAGCTGAAATCCCGAAGCAAATCTCCATCATCTAC TGGTTCTGCGCATTCTGGCCATTCTGGTATTGGCAATCCAGCGTTCTCGGGCAACGTACACCGGCAGCAG CGTAGCCAACGCCCTTCTACTCCGTTCCACCACCGGGCGACTCACACCGATGATCTCATAGGAGTCGACC AGGAATTATCATCGAGGTTAGCCCCGATCGGTGTGCCGACAACGCCGTCGTCATCGGTTGGACCAGTCTC ACAGGAGAGCAAACCATCAAACAATGCACTGCCTAAGCCAAGCCCTGCAGCGTTTAGAACTCCTGGGTCA ACAGACCCTGTGCTAACCGAATCTCCACCCTCTGTAGCGCCGTCACCGCTTATCCCACCCCCGACCGGAA CCGGTCTGAATCCCAGTGAGAGGGACAGGACTATGCCAACTCTGAGCCCGTATCCGCCTCCTCGGAATGG GGAGACGGGTTTGCCTCAAGCCAACAGCGGCCCAGTAGGATCCTCAATCGGTAGGAACTGTGATATGGGA CACTCAATTGAGCGTGATGCGTTGATAGGGAGAACTATTGGGCATAAAGAAACAACTATAAAGCAGGAGG AAGACAAAGTGTGGCAAAATTTCAGGTTACCTAGTGAGCATCATATGGACTCAAAGAGACCCCTCCTGCC ATTGTTGAGCTATGAGAAACGAGAGGAGGAAAATGAAAACATGTTTGATTCGCTTTATGACCCAGCAAAT AACGATGAGATCTTCTGCCAGCCACACAAGAAGCTGAAGGAAGAGAAGCCAGTCCAGCCAGCCGCTTCGG CCTTGGACTTCCCCGGTGAGATGGACATTGGCATGCGCCACAACAGACCGCCCTCACCCGTAGAGGATCC CTATGAATTCATGGAACACGATACATCACCTACACAGGGTGGTAGAATCTCCATCTCAGCCAGAGGAAGA ATGAAGGTCAACGGGAGAACGAGAGGTGGTCCGAGACGTCCCAGCATCAAGAAAAGCAAAATAAAGGAGG AGGAAATCCAGAGAAGGGCTGAGGAAGAGAAACCAAGACCTGAGACCTTAGCAGCCGACGGACAATCCAA TGTCTTCAACACCGATCCATCCAAGGCCATGGCATCTGCAGCAAACAAAACGATGGCCATCAAGGGAGAG ACCAAGCGCTTGATGCACACAGATGACATCAAGGTGACCGGTATGGGTGATCTTGAGAGACTCTTTGAAT CTTCTTCCTCCGATGATGATGACGGGGGTTTTGATGACATGGTATCCCAGGTGATACATCGAGGGGAAGA ATCTTCAACTAAACCCTTTGGCAACTCATTACACAGCTCCACCGGTATGCCAGGCACCAGCCAAACGGGT CCAGATCTTGCCCGGATGTATCCGACCCCGCCCTCTTTGGAACAGCAGAACTCTGCCTTCTCTCCTGTCA ACTTACCCTGTCATGAATACATTAATCACGGTTCGGTGCAGGGTATCACCCAGATTGAACACAGTGCGGC TGGAGACTTCAACGAGATAGAGGCCGATGAAAACATGGGGAGCCCTAAGCCTGAACAGATCCAGGATTGG AGTTTTGTGTACAAGATTCCACCCACAGAGAGATTTGTTGGTCCCAGTATGTACGCTCCGCTGAAGGCCC TACCGAGCAGCAAGCAACCTCCACTGAAGATCCCAGAAGCATGTCACTATAGGCCATCCTGGCAGTTGCC ATTGTCACCCAAGCCGGACCTTTTGCCTGTTACGAAAGACAGTCTTACGCTGGAGATGGAGATGAATATG AACCAGCCAATCGTGTTCAATGCACCAGGACCTACCCTCATGCAATCTCCTGCAGCTTACCCAGGTAGCC AGGAGCCTCGGAGCGCTGCCAACATCGACTTGCAGTCTCCGGCCTCGGAGGCCTCCTCTTATGTTAGGAA TATCAACTCAATGGAAGCGCCCACACCTGCCAGCAACATCCCAGAGGCACACAGCCTCCTGGTCAACCTC ACACTGTCAGACTCGTTACTCAACATCTACAAAGATAGGAACTTTGATAGCAGTGTCATGTGTGTGTGCA ACAAGAACCACATGTGCCAGTGTGGCTTCAGCGCCGTCATGAACAGAAGGTACGCTGTGGGCAGCGGGCT CTTTGCCGAAGATGAATCTGAAATAACGGGACAGCCGGCCGATGCGGCCCTCTGGACGTTCCACAAAGAC AATCCCATGCTGGCGGGCATGCCAGACCGCAAGCCGCTCTTGTCGGTGGAGGACGCGTCGAGTGAGAAAG ATGGGAAAGAAGTGTCAAGGACAGCAAAATGTGTTTTGAGATTGATTCAGGAACAGTGTAACAGTCCGTA TGCCACGCTGGCGAGGCTTGCAGGGTGTGTTCACAAGAGAGGTATCAACAGTTCAGGTCCGCTGGCCAGG AGCCAGATTGAAATCACTGATGGCTGTGATGCTTGTTTTGCTGCGCTGGATCTTGGTCGGATTCTTATGG ATGGTACTGCTGGGAGTAAGATAGATGATGCGCTCTTAAAAAGCTCCTGTCTACATAGCTGGCCTTACAC ACCAGCACTAGCCCGAAGCACGATGTCATCACAAGATGTGGTGCGGACGTTGAGTTCACTGCAACCTCTG CTGCAGGATGCCATACAGAAGAAGAGAACAACAAGGTTATGGGAGAAACCTTACACAGTACAGGGTCCAC TCACATGGCAGGTCTTCTTTAACATTGGTGCCAGAGGTCCAGCTGAAACTCCAGAACCCCTCCCCATACC TCGTCTCATGATTGGTCATGACAAGGATTGGCTGTCATCTTCACCATTCGCTCTCTACTACTGGGAGAAG CTGATGTTAGAGCCATACTCCTCAGCCAGGGATGTTGCATACATAGCCCTGGTACCTGAAAACAAGTACA TCTTACGTTGTGCCACAATGTTCTTCAAGGAACTTACTGCTGTCTATGAGGGTTGTCGTTTGGGTAGACA TGCCCCCATTGCCAAGACGTTCCAGGACGGTATCATGAAGATCGGCAAGAAGTACGCTCAGAAGCTCAGC AATGAACCGGTAGACGTCTGGTTCTCGGACGTAACCCACCTCCCCGAGGCAGACAAACTCAAACTCTACG CACAATTCTGCAGGGCCTATGTTGCTCCATTCCTGAACCAGGAACAGCCTGATGCCAGCATGTTCCGCAC CTCTCGTCACCATTCCTCCTCCTCTGCCGGCCCCAACCTCCCCGGGTCTGGCAGCAGCGGTCCCGGCTAC TCCTCATCCTCCAGCTACGTGGTAGGGAGTTCAAGCTCGTCAGGCAGCCAGGGAGGGTCGTTGCTGGAGC AAGGAAGCCAGGGTTCCGATGCCAGTAGCGCCAGCATGCCTGCACCCAGTTCAACACCTAGCAGACCAGC CAATCGGCAAGACTCCAAGGACAGTGGCGTCGCCTCCTCCGATAACAAAGAGAACATCCCCAAGGGAACC GCCCTGGAGACGGTGACCCCTCGTGAGAGTGAGCAACCTCCAGCAGTGGTGGTGTACATTGTGGATCCCT TCAGGAGAGGAGAGGATGCAGAAGAGGAAGGGGAGGTGTCGGTCGCCACCCTCGGCCTCATGCACTGCTT TGCAGAGATCTTTGATAAGCTTCAAGTGTCCCTTCAAAGGAACATTGCATTCCAAATCATTCCGTTACAC CAGGTGCTGCAGGTTGCCAACAGCGAGGTGTCGTCTCGGTTCTTGAACCAGCTCAAATCGGTGGCCTTCT CTGTCTTCGCTCAGTGCAGGAGGTTCCAGAGCCCCACCATCCCTGGCAGGAGTCTTACTGGCTTCGGACC TGCTGCAGACCTTGATAGGATGATCATCAGTAAAAACGTTGAGCACAATGAGGATAGACTCTACGCTCCA CCGTTCATCTTAGCCCCTATCAAGGACAAGCAGACGGAGCTCGGAGAGTCCTTTGGTGGGCTTCGACAGG CTTGTGGTGAACTCTTCTGCAGCTACTGTCTCTCTCATGATCAGAGATGGCTTCTTGTCTCTTGTACAGA CTCCAAGGGAGAACTTATGGAGACACAGATCATCAACGTAGATGTCCAAAACAGTAAGAGGCGGAACAAG GTGTCCATCCGTAACATCGCCCTCTACTGTTTGTGGGATTTCTTGATGGGTGTGATGTCTAAGGCTTCTA TCCCTTGGAGACTAGTCATCGGTAGACTGGGCCGGCTTGGACAGGGTGAACTAAAAGACTGGAGCATGTT ACTAAGTCGCAAGAACCTTGCCAACTACAGCCGGAAACTGAGAGAGCAGTGTTCCATGTGTAGCGTGCCA GGGACGTGTGACTTTCCTTGTATTCTCAGTGCATGCCTTGTCTCGACGGAACCAGAACCTGCTCTTCGCA TCATGGCAGATATGGTAGCAGCAGACAAGTGCAGTAAGAACAGCCAGAGAGACCAGCCCAGCTGTCAGCT GCACACTCCAGACGACGCCAGCTGTACTCATATCATGGTCTTCCCTACCAGTGCTACTAAACAAGCTGCT GCGACGAACATGCCCCAAGATCAGGCTGACTTGACATTCAATTCCGATATACGACTTGACGACGAAGACA ACATTTTTGACGAGGAAATGCTACTCAATATCTTCATGAATCCATCCACCATGATGCCGGATGATCCTAC TAACATCCAGCTAGACCTGGACCAGGAAGTTATTCCCGACGGACCAGCGCCAGCTGCTGCCGGTCCTGGA AACCCAACCACAAGACAGCAACCCAACACGGAGTCAGGGATACCGGCTGAGCCTGAAGAAGTCCTCCGTG GCATCTTACAACAACCCCTAGCCCTGGGATACTTTGTCTCCACTGCCAAGACCGGTCCCCTGCCAAAATG GTTCTGGTCTGCCTGCCCAGAGGCTGAAAACAGCTGTCCTGTCTTCCTCAAGGCTGCCCTACACGTCCAC AACCCTTCAGAGCAACCGACTGATGACATCTTACAAACCAAACACTCACATCCCCTTGACTCGGACAAGA CGCCAGAAGTTCTCAGGTATGTGCTAGAGACTTATAATAGTCTATCCTGGCTAACGGTGGACCCTGCAAG TGGCGATAGACGGTCTTGCCTGCCAGTCCACATGGTGGTTCTAGTACAACTCTACAACACCATCGCTTCT CTTCAATGATCCCTCCTGGCCCTCCAACCCTTCTTCCTCAATTTACTGAACACTTACATATGAATATCGG ATTCCTTTGGGCCTTTGTGGCGGCGACTGTGGATGGAATGGCAAATTTCTGTGTAACCTTGGGGTATCGC AAACCAAGGATCATCTGAATGGTTGACATGGTTCTAACTAGCCTATTGGGAATGGATGTGATAACAGTAC ATGTCCTTGTCCTTCACGAGTCATGTTGTCGTGTCCATCAACAGTCGTCAGGGCATCATTGAACCTGTCA ACAAGAAGTACATGCTTGGGACACTCTCACAGACGTGAACATGCTTCATCTGTGGAGACAAGTTGGGATT GAAATCTTGAGATTTCTTTGTGCGGAAATGCAACATTTTAAACCTCTCCTTCTGAGGCTCTATCTTACAA AGACTAGGCGATCAAAGATGAGCACAGCACCTTCTGAAGTTGCCACAAAGATTGGATCAGCCATCGGGGC ATCTTGGAACCGGATACCAAGAAGTGCATGCTGTACACTCCCTCAACAATCTCCTGGACAAGTTGCATCC ATATATGAACCAGTCAGTGCCATGGTAGATGCACTGAGCAACCTTTGGTGTGTACAGACATTTTCAGGGG TGAAACTGTGTGGCTCTTGCTTTATGACCAACTCTCATCACCCTACCCTCTTGTTGCAACATCTTACACA GACTTAGTGATCAAAGGTTATTGCTACAACTGCACCCTGGAGATACTACAAGCAATCTGCAGCTTCGCCA AGTCAACAAATAAAACTATAGGAGTGGAAGACATTCAGCTCAACAACCTACGCTGTATGCAGTTTATTCC CTGTGCCATTTCAAGCTCTTCATCTTGCCCTTTTCAATGATGTTCTGGATGATCAAGTATTCCTGATGGC TTTCTTGCACAAGCCATGTATGGTTTGTTTCTCTGAAGTGATATTGTGTTGTCCTTTATGTTTTCATATA TCTCTGTGATTCAATGTTCCTGCATTCCTGATGCATCAATTCATATTCAATACTTAGATCAGGATCTCGT ATCACATAGCTTAGCGATTGATCGGAGCGCTTTGATTGGGGATTGGTCACACCAATAAATATGTACAATC AATTGTACAAATCAACAGTACAATCAATTGCTAACATCTGTGTTGCATGACCCAGGGCCCGTCTTACAAA GAGTTGGGATTGATCCGATCAATCACAACTATGGATGGCCAGCAGCGTCAACATCTATTATGAATGTTTT ACTAACTGTGATGTATCTTCATGCATTCATTGTTTTCTTGAAAATTTGCTGTGCTTCTCTTTGTTTACAA AGGACATTGTGCAAATTTCCTGTA
???blast.query.upload???
???blast.options???
???blast.eval???
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???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
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???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
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???blast.wordsize.5???
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???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds