Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Search
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
MIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
MIM Diseases
GO Terms
Search
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
JBrowse2 Tracks
Echinobase UCSC Track Hubs
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinoderm Anatomy and Development Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.echinobaseSearchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.blastType???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030977784.1 PREDICTED: Strongylocentrotus purpuratus bile acid receptor (LOC581266), mRNA TCTATCGCTAACAACTTTAATAACCTACTATTGCATGTATCCCAAGTCCCTGGTACAGGTATGTTTATAT GCATGCTCTCGACCTATAGGCTCTGTACTGTGCTGCAAGTATACCACTTACCAGTACGTACCCTTCATTA GAATGATGCGGCCTTGATTTTGACACCCTCCTGTATCGGCATTTCATTTGGAGCGTTGGTGCTGTCTGGA CACAATGAAGGTCACCATGTCAGCAGAATGTAGAGCACACAATCACTGAACCGTCAGATGAACTACCAGA TATTACTACTGTACTTTATATCCCAGCTTTGAATTGAAAAGAATAATCGCTCTGCATCGTATAAGACTTG AGGCATTGACACCATGTCGGTCCCTGACTCTGCCAGTGCGGACTGCCCTGATCTCATTTGCGTGGTGTGC GGGGACAAAGCCAACGGCATGCACTACCGGGCCTTGACCTGCGAGGGGTGTAAGACCTTCTTCCGGAGGA ACGCGCGCCATCGGGACACCCTCAAATGCGAGATGATGAACGACGGAGGCTGTGAGATGGACATGTATAC CAGGAGACACTGTGCTGCATGTAGGATGCAGAAGTGTATCTCCGTCGGCATGCAGCCCGATAGATTGTGG GACAGGACTCGCCTGAAGACCCGTAAACCGATCACCAAGAAGGTGAAAGTGAAGACTGAGACCGTTGAAA AGCCCTCTGTGGTGCCACCGGAGGAATCCCCCGCCAAGGCGGTGGATCTGCTCCCCGAGTTGACCATCCA CCATCAGGAAATAGCTCGGTTGATAGCCGTGGCTTACAGATCAGCGAAAGAAGCGTTACCTCAACCACCA CCAAACCTTATTCCAGAGCCTGAATCGCCTGTACCCACCACCCTTGATGGCCCTGAAAATTCCCGCTTTC AGCCTTCAACTTCAATGAATACTGCTTCTGATACATATCCAAGTAGCTCAGCCTTACATACCAAGGGATC CACCTGTCAAAAGACACCTCTGTCCTCGGAATCTCCTGCAAGCCAGGTGACGTCTCCTAAATGTAAAGTT CCCCAAACATCCCCGAGCGCGCAACCCTGTTCCTCAACCTTACCATCAAGAACAATCGACCCCGTATTAT CCAGCGACCTCTCGTCGACCTCGTCCCCTCCGAGGCAGAGTACAACATCCATAGAAGCAGTAAGTAGCGC AGGGAAGCAGTTGTCACCTCCGACCCCTCGTCCTGTAGGAAGCAAATGCGAATGCGGATGTATCATCCAC AACAAGCCAACTCCCGAGAGTGAACCCGTTCCAGTCGTAGAAGTATCGTCATCGTCAGTCACCTCCAAAC TGTCGGTTAAAACACTGCCCAAGGAAGTTCCCTCCGAGGATCAACCCAGCACGTCTGCTGTCCAGAAAGC CCACTCGGAGGGTCAGAGGTCATTGCTTGCTGGGGGTATGACGGGCCGTGGGATAGTACCTCAGATCATG GAGATTGTTGTTCTTCTCCTGAAGCATATGATTAACTTTGCCAAGCAGCTGCCGGGTTTCCAGACTCTTT CCAGTGACGACCAGGCAACGCTGATCAAAGGTGCTTTGGTCGAGTACATGATCCTTACGTCGTGTCCTCT GTATGACATTGAGAAAGGCCAGTTCAACAGTGAGATCTGGCCAACGCTCTCCATCGACCCTGATCAGGTT GAGAGTGCCGGGTTCATCACTGTCATGGGGTCTGTCATGTCCTTCGCGGTGAAAATGCAGAAACTGTCCC TAAAGGAGGAAGAACTTGCTCTGCTGTTCGCTTTAGCCATCATATCACCAGATCGTCGAGACTTAGAGGA CGCCCTGAAGGTTGAGGAGCTCCAGCAGCCTTTAGTCGATGCTCTACAGACCTGTGTGCAGGTCAACCAT CCTAACAAGACGGGCCACTTCGCAAAGATCATCATGCTCTTGACGGAGGTCCGCGACGCCACTGAAGCCT ACATGGACGACCTGATGACCATCCAACTCAGCGGAAGCAGACTTAATCCTCTCCTTGAAGAGCTCTTCAG TGATTAGGATGATCCTGGGGGCGTTTCACAAAAGTCGTCATCAGTGACAAATGAGAGTTTTTGTTATAAG CTACTGAAATCCTTGCTTCTGATTGGTTATCAGCAGATTTGTCACTGATTTTTGTCATATGTCATGGAAA AAAGGCTTTGTGAAACAGGCCCCTGCTTACAAGACGACTCAAGAACTCCATTCGAACAACAGCAGAGTCT CTGGATGATACACTGTACATTCCTGTTCAGAAAGTCTGTGCCATGTTGCATCCATTGTAGTAGCATCAAG GGGGGTTTGACAAGAAGTCATTTTCCCTTGGTTCATATTGAATGAATTGAAAACAGGTTGCGTCCAGATA TTCCATGATTGGTTGAAAATGAAAAGGGAATTCAATTTTTTAGTTGCTTTTAACTCTTTATATGCCACAC AAATAATCTCATTCTGTCACATTGTATTTATTAGGAGATATACACACCAAAGGCTTCAAGATTATTCAAT TGTGTCCAGTGCAAGATTAATCTATACCAATGTGGTAAAAGGGTTGTCCTGGAGCTAATTAATCTAGACC GGAAATGATAATTTTTGCACAGCCATCCTTCCCTGAATTGATGCCAATTGTTTTGTCCAGAAATGCACGA GTGGCAAATGACCAACTGTGCAGACAGGCGAAGAAAGCAACTGAAGTGTTAAAGGTATATCTTTTGCAAG AGTTCCTTGCATCTTCATAGGGTAAATAGTTGAGTGGAGCAAAAATTCTCTACAGGTCGAAAGTATGCAT TGACATCTATATCCATTACCGTTAATATTAATATCCTTTTCAAAGAGAATTTAAACTTGGTATTGTGGCA AGAACCCTCGCGACATGAAGCATGCCCCCATCCTTACTCAGGAACACGGCAGGAAATGGAGCATGTATAC TGAAGACAACCCATATTGTCAACAAGAAAATTCATATAGTCAACTATACAGGTCGTATAGTCAACAAGAC AACTCATATAGTCAACTATATAGGTTGTATAGTCAACAAGACAACTCATATAGTCAACTATTTAGTCTGT ATAGTCATCAAGATGACTCATATAGTCAACTATATAGGTTGTATAGTCAACAAGACAACTCATACAGTCA ACTATACAGGTCGTATAGTCAACAAGACAACTCATATGGTCAACACGACAACTCACATAGTCAACTATAC AGGTCGCATAGTCAACAAGACAACTCATATGGTCAACTATTTAGGCTGTATAGTCAACAAGACGACTCAT ATAGTCAACTATATAGGTTGTATAGTCAACAAGACAACTCATATAGTCAACTATTTAGTCTGTATAGTCA ACAAGACAACTCATACAGTCAACTATACAGGTCGTATAGTCAACAAGACAACTCATATGGTCAACAAGAC AACTCACATAGTCAACTATACAGGTCGCATAGTCAACAAGACAACTCATATGGTCAACTATTTAGGCTGT ATAGTCAATAAGACGACTCATATAGTCAACTATATAGGTTGTATAGTCAACAAGACAACTCATATAGTCA GCTATACAGGTCGAATAGTCATCAAGACAACTTATATAGCCAACTATACATGTTGTATAGTTAATAAGAT AACTCATATAGTCAAGTAGGCTAGTAGATCGCTGCTAAAAAATTGTCTACCTTCACAATATCCTTCCTCA TTTCTGTATAAAGTATACATGTATATTTGTATAAATGTAAATAATGACGGGAATGCAGGAATGATGTTTT AAACTAAACCGTGGACTAAACCACCAATTTACTTTGGCCGGCCAAGAGGGCCAAAAAGTCAATACATTAA TAAAAAAGGCTCACAATGCAGTGCTCTTTGTCCTCAAAATTTGAATTTAAATCTAAATTGAAAATAGTGA ATAACAGGAGGCGCTTTGGACATCTCCTATTACGACAAGGTATGTCCTCACGGCACACATTCTCATTGGA ATAAGCAAGTCATTGTTGGGCTTATGACGCTTTATCTGGTAAAAGATAAATGCAGGAATTGTGGCATTAA ATATCAAGTTATAAATCATACTGTTATTTGTCGGTACAGATATTTTGAAACGTTTCATTTTTTCGTCAGG AGGCAGGTCTGAGCCTGCAGCGTTCTGTTCAATCACTGCTGTAAACTCAATGTAACATGTTTGTACACTA GAGGTATTTTTGTTGTCGCGTCATCCATGATCTAATTGTACATTGTAAGAACCATCTGGAGACTACATTC TTGTTTTTTCAGTACCATATTTATTTTTCTGTGGTATTAAAGGTGTACGTTATTCCAATTATTCACTAGC TCATTATGTATAAATTGTTACGTAGAATATTAAGTTGGTTAGCATCATTTTGGGTCATTTCATGCATGTT GTTTGGTTTATGTCTTTACCATAGATCTAATGTCCACTTGCACAAATGTTAGAGAACAACGGGCAGAGGT CATGATCAATATCATGCACAAAATTAATATACCAATTCTCTCCTGGAGACGACATCAATGGAATGAAATG GCTTTTAATACACCGTATGCGTGCGTTAGCGAATTGCCACTCAGGAGTATTCATAGATGTTTTATTTTAT TGCAAGAGTTAGGGGCTTTATTCCAGGTTTAAATCAGGTTTTTGATGTTGAGATATTTGTAAAACCAGAT ATTTTTTTAGTGAATTCCATGAGTGGTTTGCTAAAGTTTAATGCCGCAAGAGGAGATGATCATACACGTA TTTCAATCGTGTGTACCGGTTTGAAATATGCTGCAAGTGTTTCCTCTGAAACGTTGTAGGCTCTGAATCA GGAAGATTTAAATTTGTACTACTTAAGTTTTATTTTATTGCAAGAGTTAGGGGCTTTGTTCAAGGTTTAA ATCAGGGTTCTTTTTGGAAACATTTGCAAAACCAAATATTTTGTTAGTGAATTCCAAGAGTGGTTCACAA AAGTTTAATGCTGCAAATTAATTCATGCAGAATTGACAAAATACTTAAAGTAAGTGTTGTTTTTAAGTAG CAAGTTTCATGTTAATCATGTTTCCGGATTTACAATATTTTTTCATTTTTATTGTCAGTAGGTTTTTATG CCCCGCTACAAAGTAGCCGGAGGCATTATTTTTGTTATTTTGTTCTTCCTCTCAGAATGTATCTTTTTGG AAAAGATAGTCTAACTGGACTCAATCTATTACTGTGTTTCACAAAAAAATGTTTGTTTATTGATTAAAAT ATTATGTTATTCTGTATGATACTTGCATTAAAAGATCATGAAGTTATATGGAAATAAAAGTAGCCCCTAA AGTTGTGTAGAAGATGATATATTGATCTACATTTGCCACTCATCACCCAGGTAGAGAAAATTGATACCCA GGAGGTAGAAATTCCTTGAATGCTTGAGCATCTTTCATGGTAGCTTGGCTAAAGCCAAGGTAATCATAGG ATTGCAGGGCCCTCAGGGAGAACAGTGGGTACCCTGGCTAAATAATGTATTATCATTAATATTATAACAT GCATCAAATGCAATGAGTAATGCCTGTTATAGAAATGAAATGTCACATAATTATTATTACTATTATTATT ACTATTATATTTACTATTATTACTTTTATTATTACTATCATTATTGATATTTTTATCATATATGATTAGA TATTAGACATTTTAGTGTTTAGTTCATAATTATGTAGTAGCTGAGCCAATTTTTTCAATCTTAAGTAACA TTGAACTGAAATACTTAAAAGTTAGAATGTATATTGTCACAATACTGATGTTTAAAACAAAAATGGAGAA AGTAAATTTGTCGGGAAAGTGCAACTGAAATTCAGAGTTTACTAGATTATTTTTTCTTGGCCACAGAAGT TTTCTTAGACATCATGTTGTTTGTATGCCTTTCTGAAATAAATTTTGAGATTGCTTTTAAAGTACATTCA ATGTACCACTAGCAGCAGATGATTTATATTGATATATGTTTTCAGAAATATTTTTTCATGAAATCATAAA TGCTGAATTTCTATATACAAAGAGAGATGTCTTGTACTGATAGTAATTTGAGTAATATTTGTTTGATGAA ATCATAAAAGCTTAGTTGTACTGACGTGATAGAGAAAATCCCTCCTATATGTTTCTTTCCGTTTTTGTCG ATGCCAGTCAAGTTTTGGTAGACTGCATGCAGCTGAATTGGATGCTGCCGGCGTGTGAAGAGGTAAAGAT GAAGGTTGTGGAGGAGGAGAAAAAATATATATTTAAATGCTGCAATTGAATTACACTTGCATTGTTATGG TTCCTATGGAAAAGTTTATTTTGAATATTTGATAGACGTGCATATGTTGTGTATTTCATCTCCATGTACA TATTTGTTTCGCCTGTCATCAAATGTTTGATCTTAGTTTTGTATGTCTCTTTCTTTATGTCTCTGGTTGG TTTTAGGGACATATGCTCTGGAATTTACCGTAGTAGGGTTTCAAGTTTCAAGTTTATTTGTTTCACATTT CACAAAAAAAGAATTCACATATTTGACAAAATTAGAGCATAATATGAAATATACTAAAAGTGTC
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds
