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BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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Blast program
blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database
Database
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
FASTA query sequence
>XM_788294.5 PREDICTED: Strongylocentrotus purpuratus probable UDP-sugar transporter protein SLC35A5 (LOC588619), transcript variant X1, mRNA ATAAAATATACGTCACACGTACCGGTACTTAACAGTACGTGGTATCGTAAGATTCAGTCAAGCAAAGCCA AGCCAAGTTACACGTTTTTACTCCGAAGTCCATTCGAAAACAAGGCAATTTCCAAGGGCTACAGCTATAT AATGGGGGACGTGGCCCGTGGCACATTACACAACAATCAACGCAGTTATCCTTGATTTAACAAGAGGCAC ATGTGAGAATAAATCAACAGAAACAGATACGAGCCAAATCTATTGACAATGGAGTGCCCTTCAATGACAA CCGTAGCCTTGACAACTGTTTATGTTGTGCTTGGAGCTGGCAGAGTAATGCTCATGAGATTATCAGCTAA TGAAGATCACAAATATGACTACTTGCCTGTGACAGTGAACGTGTGTGCCGAGGCGGTGAAACTGGTCGTA TGTTTGTCTATCATGCTCAAATTGGAGATGAGCGGTAAACCTATGTTCAAGGAATTCATTCAGTTCAGCT GGCCAGAATGTCTCAAGTTCTTTAAATGGAGCATCCCAGGCCTGCTGTATTTCTTTGATAATCTGATTGG ATTTTCAGTTATGACTTTCTTTGAACCGGCTGTAGCTGTCTTGCTGGGAAACTTCACAATTATCTCAACA TCAATACTTTTCAGACTCATTTTAAAACGAAAATTAAGCAGGGTGCAGTGGGCTTCTCTCCTGATTCTCT TTCTAGCGATTGTGTCGTTATCAAACCAAGATCACCGGAGCACGCTCAAAGGTCACCACCACACATCCGA CTCGCTAGATTCCATAGACAATGCCACTCTCTATGAGGTGGAAATCCTCCAGAAGCGACATGCCATTCCA GCCGTTCCTTCGGACCTCTGCCATCGGAAACTCCGCCACACGCCCGAACCTTCCATCTCAGAGGCCAGCA AGTACAGCTTCACGGTCAGCTTTGGGCATGTCTTGATCGTGGTTCAGTGCTTCTTGTCGTCTTTTGCGAA CATCTACAATGAGAAGATCTTCAAGGAAGGCCACAACGAGGATGGTATCTACATGTACATCGTTCAGAAC ACCCGGCTGTATACCTTTGGGGTGATATTTAACACGCTTACGCTCTTTGTCATTCCGAACTTCCGTAACC GCGTCTTCTATTGCGGGATGTTCAGCGGATACTCCTGGTACTCCACGCTGCTCATCTTTGCCACAGCCGC GCTTGGACTCACAACGTCCTTGATCCTGAAGTTCAGAGACAACATGTTCCATGTCCACAGTGCGCAGGTC ACGACTGTCGTCATCATCAGCCTGTCGATATGGCTGACGGGGTTCCAACCGACCCTGGACTTCTTCTTGC AGATGCCTACAGTGTTCCTGGTCATCATTATCTACAACAACAGTCACCTGCCTGCAGAACCCCTATTGAC CCCTAGGATGAGATACCCATCAGAGAGTACTAGCAGAGGGCAAGAGAACTCTGTTAGGAAGAGGGGTACG TCGGTGAGTGAGGAATTGATAGAACTGACACGAATGGATGAAGAAGATGAAACCACCTCTGTAGAATTAT AGGGGTGGATGACATACTTGACCACTCCTATATCCTGATGGTCAATCCCTTAGGTTAGACCATGCTGACC AAGCATAGCAGTTAAAAGTGAATGCTGAAGTGAGTGATCATGTGGAGAAATTGCAACCAAACGTTTGTTA ATCAGTTAGCAAACAGGGTTACTTGTTTCAAGGCGACAGAAACATTAGTTATTGTCCTGGTTCAGGACAC ACTTGCTAAGGAAGCTGTGCAATAGAATGCCTCATATATTTTATGCATTTTCATACATATCATGTGTGCA AATATCATGCAACCACACTGAGTATCCACACTAGACAAATGTCTAGACAAATGTTGTTAAGTTTGAATAG ATACATATCAATGACATTGGTAATTTTATGAATACCGGTAGCTAATTTTTGTTTACGATGACTATTATTT TGTCATCACCATGTATGTATCCATGTTTCGTATCATATTTCTGTTCTTTGTAAACTTTGTCTGAGCTTTT ATGTTACATGTGAGCAAACCAAATATTTATGTTGAATGACATGGGACAGATAAATCAGTACATTGAATGA ACGAATGTTGTTTTGGTTCTATGCTATCAGCAATCTGGAAAGTGGGGCTGTGTTCTGCCATTCTGCTAAC CACTGGCACGCACAGGATAACGTATCATTTCCGTTATAGTATTATGTATTGCTGCAGTTGGTGCAGACAA AATGTGAGCTTTATCTGCAGATTTCTCCCTGAAATACTTCACTCGCAGTCAACTTTTATATTATGTATGC TGTACAATCATTCTTAACTAATTTGACTTCATTGCTCATTGTTTATACAAGGGGCTGACATAAACTCTTG TCCAAAATAAAAGCAATAGGACTTTGCTGCATGGAGGGGGCAGAGGGGGGGGGGGGGGCAATTTTGCAAG CTGAAAAATATGCATTGATATATTTGTGTTGTCTCTTTTGAGACAGAAATTGGCGGCACTTGGCACTTGG CCTACTTATATGAAATAGGAATATAAACAAAGCTACTGATAAGAGGACATATATAGCAAGGGGGCTATTC ATCCTCTTTTAATGTTTATTGACCAGTTTTCCTGGAGAATTCTTCGTAGAATCGGTATTTATGTATAGAG CTGTTTTAGTCGATAATCACTTGTTTATTTGCTGCCCATTTATGCTCTTGTTTAGGTGCGGAGTATTTAT TACTGAGTTTCAAATGTCTACATCCATGTACGGTATTTTTCTGACAAGTGAAGAAGAAATAATAAATCGA CCCGATGATTCAAATTAAGCCAAAATAATGTGTGCACAATTAAGAGATACTTATTTGTAAATATCAAATG AATAAATAGATTACTATGACTGTCATGCTTGTAAAA
Load query from file:
Options
E value
0.1 (Default)
10
1
0.001
1e-5
1e-25
1e-50
1e-100
Number of alignments
25
1
5
50
100
Word size
Default
2
3
4
5
6
7
8
9
10
11
12
13
14
15
Default = 11 for blastn, 3 for all others.
Matrix
BLOSUM62 (Default)
BLOSUM45
BLOSUM80
PAM30
PAM70
Gapped alignment
True
False
Automatically set to False for sequences longer than 4500 bytes
Filtering
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Off
BLAST time is limited to 30 seconds
