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BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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Blast program
blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database
Database
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
FASTA query sequence
>JT115458.1 TSA: Strongylocentrotus purpuratus WHL22.88825.1 mRNA sequence ATTTACACATAGCTTTCTACATGCATATTGGTCTGTACAGGACAGCTTCAGTATATAGGGCCTGTTATTA TGTTTATAATGATTGAAGCTATAGAACGAAGTCAGTCTTCGCGTCTTGGAAAATAACAGTGACTTGAAAA CTTGTGGAGACTTTTATAACTATTGTTGTGCAGCTGTGTTGAGTCTGAGCTAAATAATCACGCAGATTAT GTTAGTGGTTTCCACCAAGTTGTAGAGGAAGAATAATTATACTCCAATACGTTTTCTTGAAATACATTAC CGTGCCTGCCTTAAAGTGCTTCTAACTCGGACGCAACTTCACCAAACCAACTATATTTTCGGAAACGCCT ATTTTTCTCTGCATTTTTCTAGACTCTGGGGGAAGATTGTGGACCCTATCGCTGTCTGATTGAGCCTACA TATTATTTTTGTAGTTGCCTGGTATCTCTCCCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCGCTA CGTACCAGCACGAATGGGCGTGATGCGGTACGTTCCCATTGCGATCTTAATGAGTGTGCTCGTGACGAGT AGCGTTCAGCAGCATGGGAGACAGTTATCGAACTGTGTCTGGGAGTACGACGACGGTCAGACACTAGATT TGACTAGTGCGGGGAACACTGATGGAACAGCAAGATGGAACAACGTGACTGCTCTAGATGTAAATCAGGA CCCAAATTTATATACCATAAACCCTTGCTATGGATTTACATTGGGGACTGAGTGCGCAGGTGTGGCCGTC TGCCGTATAAGTAACATGGGCATCCCTCTAAATGTTGCCGCTACCAGTTCTGGCCGTATGTACTACAGCG AAGCTGACAATGGTGTGGTGCTCGAGTACAACCATACAGATCCTAGCGACCCGGATTTGGTGTACATCAG TCGGTTCCAATCTGCTTGCAACGGAGGAGAGGAAGTCCAGATCGTCGTACTGGGCGCTCAGTCATCAACT CCGAATCAAGTCATTCATCGCTTCATCCTGCTCTTGACATGTGCTTCTACGATTGTAACTCCAAAGACCT CTGTCCCGCCCACCGTCACACCTCAGCCAATCATAACCCAGGCCTCACCAGTTACCCAAGCAACAATCGG GCCGCACACCGTTACCCACGTAACAATCGGACCGCCCCCCGTTACCAAAGTAACAATCGGACCGCCCCCC TTTACCCCGGCAACAGTAAGACCGCACCCAGAGACGCACGGTTTGACAGCTGGAGGAGTGATCTGCATTA TATTTGTAAGCTGCGTATGTGGGTACTTCCTGATTGGTTCTTTCTATATGTGCTGCTGCAGTGGGGCAAA GGGGTTGGAAATTATTCCTCACGTACACTTCTGGCTTGATCTACCCACTCTTATCCTGGAGGGATTTTTC TTCCTCTTCAGCTGCTGCGGTAAAACTCAATTGATGGAGACCTCATCTGGGCAAGACTACGACAAAATTT GATACGATAGCTTTCCTTCAATATCATGATTGATTTCACGAGCAGAAGGGCGTTAACTCATGGCCCTCTA CGGCGACTTAACGCCCTTTTGGCTCTAAAGGGACGTTCTGTACCCTTTTTAGATTTTCAAGATTTATAGA AGTCCACTCTTTGAAGAGGAGTCATAATCACTGGCGTATTTTGAAGGAGGGGGAAGGAGTGAAATTTATT TTTAAAACCCACCCCTGACAGGTTATCCCACCAATAAAATGCACTTATTTTTTATAACTAAAAATATTAA AGCAGAGCCACGTAACATAAAGGTTTACAATCAATTGAAAAATTTAAATAACGGTTCTGATTGGTTAATA GTCAACCTTATCATCAATATGTGCATGCAACGATGATCTTGATTGGCCATTAATAATTGATTGCAAAATG TAAGTCAGTAATGGAAATAATGGATCTAGAGTAGATTTAACACCAGAGCAAATTGGTCCATGTTATCACT CCTAAAAGAGTGGATATATTATTGCACCCTCTGTATTGTCTCCCTTAGGCCTTTAAAAAAATGTTGCATT ACCCTTAATGTGCCAAAACATCGGTGGGTCGGTCGGAAATCTCTTTTTTGCCCTCCCTCTTTGGGCTGAT ATTTCTCAGTTTTGAATGCTTTGATACATATTTTGATATGCATTAAACATTTTTTTATGTGTAAAAAAAC GGATTTTGGGGTCGGTCGCAAAGGACAATACAACATCTTTTTTTTAACGCCTTATTGTCTCCATTGAGAA TAAAGTATTGTAGAACATGTCGATGCAACTATTCTTCACGTGGCCACTTTGTGTTCGTTTCCCTAATTGG AAGGCATTTCATATCAATAGGCTTAATTGATTGTAAAAAGATTCGCTTTTAAAACAAAAATATGCTGATA TTCAAATCACATTTTATTTTTTAAATCAACCGTCGCTGTTTTCACGAAGTGACGGTATAGTGAAACAAAA TTGCATTCACTTTGCGTTACGATTTTCCTCACTACCGTCACTTCGTGAAAATAGGGACGCAATGTCATTA ATGTTTTCTCACTGTTGATATTATTGACACGATCGCAAAGACTTTCGAGGAATAAAATTAACCTAAAGCT ATTTCAATAGCCTTTCCATCACCTTGTAAATTATGCGAACGTTGCAATGACGCGTTATACTTACAAAGTT AATCAAAACGTGACTTCTATGGGATTTACAATAGGGCAATGCACTTAACTTTGAGTTGATTCCTCGAAAG TCTATATGCGGTCATGGTTTGTTGTTGTTGTTTTGTTGTTGTTGTTGTTGTTGTCACATAGTGTAATCGT ACAAACGATTCAGTGGCGGATCTAGTATTATGTGACATGTGACAAGAATACAAATTATATGATGAAGAAT AATGTCTTTTTAACGAGGAAGGAAAAAATGAGGTCGCATTTTTTTTCTGGAGGCTCGTTCCCCCTGTATA TACCCCCTGGTTCCGTAACGTTGATTCTCCAACATTGGACAAAGATATTAAAAAATAATACGGGCCTAGT TGTTTCATGCATTATGACGAAATACTTTTGTTTCGATAAAAGAAGTTTTTTTCTTTAAAAACATCATTAA ACTCATGCATCAATATATAGAATATCGAGTTCATTACCTGCTGCATTTTTGTTTTGTTTCATTGTTATGC TAAGTGTACTTACCGTAATGGCAATTGTCAGTACTAAAACTGGGAGGAATCTAATATTATAAATGTTCAA CATTGTCCACATTCAATCTATTGTGTAGAATTTCAAAGGGATAGACAGTGGTTTTCTCAATGTCAGAGTA TTTTAGAATAGTGTCACTGCAGCTATTAATCTTCATTTTCCACTCTTAATCCAGTTGTATATTTTATACG ATATTTGATAGGAAGTAATTAACTGAATGATTCCAGTGTATATGGCTTATAGAAACTTAGCTAAAGCAAA AGTACATGTAGTACTTTAAAGCCTCCTTTAGGATCCATGCAGCTATTTCCAGTATTATGTTCATTTAGAT TTGTTTAATGTGTACTGCGCGGTAATCATAATTGTAAAGTGAAGACAAGTTCAATGAATGTTAATTACTC ATTATTTGACATGTTTTGTTTTCAATGATTTGCAATATTGATAGTTTATCACAAGCACTTCTAATAATAT TGTGTAAATAAATTCAATTGTTTTTTTAATAGTGCGTGGCAGTGGCAAAGAGAGGACTGCAAAGGGGTTG GGGAGAGACTGAAAAGCTGGGGCCAAGAAAGATTTTCATTTTTGGCCCCATGGCTTCTTTTTGGTCAAAA TAAAGTTCCCAGCTTTATTTCCTTTTCCTCCTTTCCTTTCATCTTTTGTGCATTCTTAAACCATGCTCCT TGTTATGAAAATACTAAGTCTGAAATGTTAAGTGTTTCAATGTTCTGCGCTTTCGATGAAACAATGTTAA CCCATTGCTTACTGGAACCTGGTGGTCCCTGTGTTACGTCTATGGCAATTAGATAATTCAGAAGTCAACG GGTTAATGTCAAATGTGTTTGTAAATATTCCTCTCGTGATACCAAAGAGTCGCACTTACAATACTAATGA ATGTACGTGTATAATATCCTAAATGCACTAGGCCAGCCGCAATTCTCAACCTTTTTGAACTCGAGGCCCA CTATGGTTGTTAGAACATTTTCGAGGCTCACCTTACAAAAAAACAATGAGAAATATTAGCAATGAATCAT GACACAGGAAAATAAAGATCGAATTGTCTGATAATTATATGCAGTGGCGAATTTATATATTGTTGCACCC GGGACAAACAATGTCTGATATTGGATTTGGGCCACCCCGGACCAAACTTACTAAAGTAGGCCGACTGAAC TATATTAATAATATAGAAGCGAGAGCGCAAGCGAACTATGGTTGAGAAGCGCTGTTGAATAGGCGATGTC TGTGATAACTCATTCCAGTTAATTTTTGTTCTTCTTATGCAAAGTTCTTTTTAAGATAATGTTATACCTT TTGCAATACTTAATTGTAAATTAAGAGACTAGAGTCTTTAATATACAACGTCATTTTCAAACTTGCATAT CATTTATACAGAGATTTTTTATGAATGTGTGTGTATATTATTATTACGATGATTATGAACTTCATTCAAA GATTATTATGAATGGAAATTAAAACAATTAATTATTAATAAGGA
Load query from file:
Options
E value
0.1 (Default)
10
1
0.001
1e-5
1e-25
1e-50
1e-100
Number of alignments
25
1
5
50
100
Word size
Default
2
3
4
5
6
7
8
9
10
11
12
13
14
15
Default = 11 for blastn, 3 for all others.
Matrix
BLOSUM62 (Default)
BLOSUM45
BLOSUM80
PAM30
PAM70
Gapped alignment
True
False
Automatically set to False for sequences longer than 4500 bytes
Filtering
On
Off
BLAST time is limited to 30 seconds
