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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_011664718.2 PREDICTED: Strongylocentrotus purpuratus sodium bicarbonate cotransporter 3 (LOC580912), transcript variant X3, mRNA CCACACACAAATTACATGGAGCAGGAGTCGCTCGATTTGGAATCGGACAGAGGGTTGTTGCAAGAATCAC CGGTATCATCTCGAATCCGAAGAGCTCGGGGCAACATGAACGGGCCTGTCGGAGACGACACAGACGTGGT GGTGGATACGGGAGCTGGACGAGCCAGTCGACACATCGACAACAAGGACATATCAAACCACCGATCAGGA GAGATGTACGCAGGTACTGATGGACCGGACCGGAAGAAAGGTCACCAGAACGGTCATGCTAACCCGGTCA GCAACGGACCAAACTCCCCACAGAGTCCAGCGGCCCAAATGAACTTTGAAAACGAGGTTGGAGAGACCCC ATTACAGCGTGTGCAGTTCTTGTTGGGTGGTGATGGAGAGGGTCGTCAGAAGGACACTCCACCAGTCTAC TCTGAAATGGAAGAGTTGTTTTATGATAAAGAGGGTCGTTTACTCGAATGGAAAGAAACTGCAAGATGGG TGAAGTACGAGGAGAACGTCGAGCACGGGGCCGGCCGTTGGAGTAAGCCTCACGTCGCCACCCTATCCCT TCACAGTCTCTTCGAGCTCAGGAAGTTCATCAGGAACGGTGGGGTCCAACTCGACATGGTGGCAGACGAT CTGGAACAAATCATTGATCTCGCACTGGACAACCTGGTTGCCACAAACGTCTTGGAGGAGGACCAGCGAA TCATCGCTCGCGAAGCTCTCCTTACCCGTCATCGTCACCACAAACAGAAGAAGAAGAAGGAGCCCGAAAA CAAAGCCTACAACAAAGGTCGCAGAAAAAGCAGCATGTTCCCGGGTATGGACCGCGCCATGTCCGATATC GGCCGCAGCCAATCCACCGGAAACAACACAGTCAGCATGGAACAAGAAGCACAAGAAAAGGATGGAGAGA TGAGGAAAAACTCAAGCGCCAATGCTCTGTCGAAGATGCCCGATGGCGCCCGAACCGAGAGCCGAGGGTC TGTCGGCAGAGTCGGCACATCGGACAGCCTCGATCAGAAGGAGAAAGAGGTTAAGAATGAGAAGGCGAAG TTCCTTCGTAAGATCCCAGCTGGTGCCGAGGCTTCCAATGTACTCGTGGGCGAAGTCGACTTCGTTGAGA AGCCCATGGTCGCCTTCATCCGCCTCAACGAAGGCAAGGTGTTATCGGAGATTACCGAAGTGCCCATCCC GACCCGTTTCGTCTTCCTACTGCTCGGGCCACCTACAACTGACAAGAAGAAGTACCGTGAAATCGGTCGT TGCATGGCAACCCTTATGACAGACGATGTCTTCCACGAAGTGGCCTACAAAGCAAGAGACAGGGAAGATC TGCTAGCTGGTCTGGATGAGTTCTTAGAACAGGTCACTGTACTTCCTCCAGGTACCTGGGATCCTAACAT CCGTATCGAGCCTCCCAAGCAGACACTATCCTCTGAAATGAGGAGACAATCTCAGCACTTCACCCATCCA ATCGACATCATCAAGGAAGAAGAAGAAGACAAGGTCGAGCTAGCAAGAACAGGAAGACTATTCGGTGGTC TCATCAACGACATCAAGAAGAAAGCACCCTTCTACTGGAGCGAATATTACCACGCCCTCAACATACAATG TTTGGCCTCCTTCGTCTTCATGTACATCGCCTGCATCACTCCCATCATCACCTTTGGTGGGTTGCTAGGC GATGCCACCGAGGACTATATCGCGGCCTTTGAGAGTTTGATTGGAGCGGCTATCTGTGGAGTTGTCTATC ATATCTTCTCTGGTCAACCTCTCACGATTATTGGTAGTACGGGACCCATCCTCATCTTTGAAACCATCAT GTACCAACTCTGCGGATCGTTTGGGATTGATTACATCTCGTTCCGTGTTTGGATCGGGTTCTGGACCTGT GTTATCTGTATCGTGTTGGTTGCTACGGACGCTAGTGCCTTGGTTCGTTACTTCACCCGATTCACCGAAG AAGCCTTCTCTTCTCTCATATCCTTCATCTTCATTGTGGAGGCCTTTGAGAACCTGTTTGAGATCAGCCA CGAGTACCCAATCAAGACTCATGTGAAACTGGGCGAGTACTTCGAAGAGCACTCCACGAACGTTACCGAC ATGTGCATGTGCGAGTACGAGAACGAGACCATCGATCCCGCCATGTACAACTGGACAGAAAAACTCACCG AGGAGGACTGCAAGACCGTCAACGGGACCCTTGTCGGAGACTGTGAAACCCATCACGAAGCTGTCCCGGA TGTGTTCTTGTTCTCTTGCGCCCTCTTCTTTGGCACCTTCGTCCTCTCCTACGCCCTCAAGAACTTCCGC AACGCCAACTTCTTCCCCACCAAGGTTCGCTACATCATCAGTGACTTTGGAGTCTTCATGGCTTTCCTGG CTATGACTGGAATTGATATCTGGGTCGGCATCCCCACCCCCAAGCTCACTGTACCAGATACATTCAGGCC TACCCGCGCAGACCGTGGATGGGTCATCCCTCTCTTCAACAACCCATGGTGGACTTACTTCGCAGCCATC GTCCCGGCCCTTCTCTGTTCCATCCTCATCTTCATGGACCAACAGATCACTGCCGTCATCGTCAACCGTC GAGAGAACAAACTTAAGAAAGGATTCGGCTACCATCTCGATCTGCTCGTCATCGCCATCCTCCTCTTCGT CATGTCCGTGCTTGGTATGCCCTGGTTCGTCGCCGCTACCGTTCTCTCCATCAACCACGTCGACAGCTTG CGTGTCATGTCCGATACCACCATCCCCGGAGAACCCCCTAAGGTCGTAGGATGCAGGGAGCAGCGTATTA CAGGTATCCTTGTGTTTGCCATGATCGGTATATCCAGTCTGCTGACTTCAGTTCTTAAGTTCATCCCCAT GCCCGTACTCTTTGGTGTCTTCTTGTATATGGGTATCTCATCTCTGCGTGGCGTACAGTTCGTGGACCGT ATGATGTTGTACCTGATCCCAGCCAAACATCAGCCTGACTATGTCTATCTGCGTCATGTCAAGCTATGGA GGGTCCATCTCTTCACACTGGTCCAACTCACCTGCCTGGTCCTGCTCTGGCTCATCAAGACATCCAAGGC TTCCATCGTCTTCCCTCTCATGGTATTGGCTGTTGTGTTTGTTCGTAAACTCCTGGAATTCGTCTTCACT CAATACGAACTGAATGTACTTGATGACGTCATCCCTGAGAGTCAGAAGCGCGCCAAGGATGATGAGGAAA AACATCTCGAGGATCAACGCGAGCAGGTGACCCGTGCTCGTACCGGTACACTCACCATCGCTCTGGAGAG CGGTCAGACACTGACCGTGCCCGCGGAGAAGGTCACGTACAACCCACGTGACTCGGAACCGAACTCTGAC TTTGAGACGGCCAAGGCACTCAGCAAGCTCAGCGGATCACCGCTACCAACGGTTCGCAACCGTCGCGCGG CGTCTAAAACAATCAAGGATCCTGAAGCGAATCCGGGAGCGAACACCGAAGAAGGAATCGACCTCCCCAG TGGTACCGGTACCTCAAGTTTCGGTGTTCAGGCTGACATGGACGATACGCGATTTTAAAGAAAGAGAGAC ATAACAAAAATCCCTGCTGAAATGGAGGTGCTTTCAAGTTTGTTGTTGACTATTCTCTGGTGTTAACCTG AAATCCACGGTTTAAAAGATCGTGTTAGAATGTACTTCTGGATTCACATGTTGGCTTTGGTATTTGGTGT AATATAGATGCCCCAACACCCCCCCCCCCCCCCTCCCCACAAGAAAAGTAAAAACATAGGTTGATCTAAC ACCAAAGTTCTTGGTCTACATTTGGCTACATTTGATGATAACACCATCCAAAATTCTTTTCAATTTTCAT CTCAATACCGACTAAATCCTAGCAATCTAGCAAGATGGCAGACTGTTGTGTGTTGTTCAATTTGATTTTA CACCAGACTTCAGGAAAAAAACACCCTACTTGAAATCACCCTAAATATGATTACATTAATCATATCCTGA TCAATGCGAGTTCTCCAGAAGTCGAAGGATAATAACGACTATCAAAGTCGATTGGATTTGAATTAGATTA ATCAATAAATGGTATATTCTTTTCTTCCGGATTATCTCGTTGAAAAAAATAGCATATCAAGTGCAGTATC ATGTGTTTCGTGATTTTGTATTCTTATTTGAATTCACAAATTAATTGAATTTCACACTATTTCGGCTTCC ATGTTAATCAAATATTGTATTCATTTTAATTTCATTTCACTCGTGTGTGAAATCATATTTATCGCCACTT CGCTATATCAGAAAAAAAAGAAGCATTTATTGAATTTGGAAACGGTATTCATGTGGTTATACTACTATGG CGTTTAGTTTGTTTTAGATATTCGAAATGACATGAAATATGGTGTGTGCTTTGTGCGTAGATATCCGTTT TGTGAAATAATTATATTTGCCTTTCTCTCAATTCATATGACGTATAACGGATGAAATTTTAAATTTGTTA ACGAGTCACTAACTTCTCTGCGCGATCTTCATGTTCATGTTTTTCTCGTGTAAATATTCACCAGCACAAA ATAAAAATGTCAAGAACAAAATTTCACGCCGTGATACTATGCAAAAAGATGACATTGTATGTATAATGAA ATTTAATGAATTCACGTGTGTATTGAGTCTTTCTTATGATTAGTCTTTCAAAGCAATTTAAAACAAATTC AATAATGAATGCAATGCTATATTTTTCTATTTCTATTTGATGATTTTGTGAGTTACGAAACATAAATGCC AATGTCTTTCTGAAGATTTGTTTTAGAATTGTCCATGATTAAAACATTCATTCCAATACACTACTTGAAT ACTTTAAATACATGTAACATTCATCTTCCATAGTGATTTTAAGGTGCTGAGTACAATAAATGTTTTATTT TGCAATATTTTGAATAAAATGTGCTGCAGTAAACCAGAATTGAATCATGAATTGATTTTCAACAAATAAT GCACTTCAGAGCAGTTGCAATTGTAATTATAGAATGATAAAAGCGGAATAATTTAATTTGTATTAGATAG CTTTACCGTTTTTAATGATCATTAACGTTTTTAACTTATTTCTCTCATTAATCTTGTTGGCCCATACCCA TTAATGTCATTATTTGCTTTTACTGTCGAAGTATATTTTCTATTTGCTCGGTGATATTATTTTAGTAGTA TACCGTATGGTTTTAGCTGTCTTGAAATATTCGCTTTTTACCCATGTTTTCTATGTTTACCAATAATGTT TGCTTTATCGAGAAAATTACACTTCCAATAAGTGCCTTGTTTATGATTTTTGTAGATATTTTATCGAACG AAATCAAAATTCTTAAAAGTGAAATTGACCTCATGGTCCTAAAAGTAAAATTGAAATCATTAGAAATATA TATTTGTTCTCTTATACGTAAATATGTATGTTGCATTGTATACATTTGAGATGATAGTATGGCTAAAAGT GGTATTCATGGAACTTTTTAGAGTAACTGATTGTTTGATGGTAAACCGATTTTAAGATGAAATAATATTT GGTCCTGCATCGCTCATTTTAAGGTTATGTATATGCACTGTTGATAAATGTATGTTTCTTTTTTTATTAC TAAATGTATTTGAACGCTCAAAGATACCTTAATTTCTGTAATGAATATCGTGATGTTTGAGAGTGTGACC GTAAGCTAAATTAGTGTTAACATTAAAGTATTGGAAACGGTGAATGGAGATAAATATGTGAAGATTAAAT GAAATAAAAAAACATTTTAAGAGATTATTTTACCTTTTTTTGGTACAAAATATTTGTATTATAGCAAAAA GCAAGCGATGGAATGTTGAGGGGTAGGTGTTACGCAGTAAATTGCTGGATGCGAATATCAGCAATTTTAA ATGTGTTTAGTGACATTTCTTAACTTTTTTTTTTACTATTCTATAATTGTACACAGTCCACACCTCTCAC GTTATAGTGAACAATTTGATGCATGTTGAAATAATGTAACATAATTCCGTTATTACAAAACTTTACGTTT TTCTGGCGCCGCAAAGGGGATATCAAGGTGGAGCTTTGAATTTGAGTGGTAAGTGGTATATGTTTGGCGC TTATGTCGTAAGCGGGCTTACAGTAAAAAGACAACCCCTGGTCTTCTTTGTATTCTTGTACGATTAGTGA GTCTTTATTTTTACAGCAATTAAAGAGGCATTGATAAAACAAAA
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds