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Echinobase Accession
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Echinobase Accession
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BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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L. variegatus
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Alignment program
blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database
Database
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
FASTA query sequence
>XM_030981636.1 PREDICTED: Strongylocentrotus purpuratus multidrug resistance-associated protein 5-like (LOC105447431), mRNA ATATACATAGCCCTCCAAATGCTAAAAACAGCACTTTAGTTTTTAGAGTGTACCTGTTTTCCTACCTAAA TTTAAAGTCATTGGAATTATCAAATCTGGATACTTTTGACTTCTCAAATAAATGTTTTGAGTCCTATGAA GCTTTATATTGGATTTTTTTACATTGTATAGATATTATAAATGTCCGGGTCCAAACGATAAGCATGTAAG TTCTAGCCGTAAGGGAGGCACATGTACCAAATTAGGCTGACAAGCATGCAAAGAAAGCGAAGAAGAAGAA GAAAATAAGAATGAAAAGAAAAACAATAAAGAAGAAGGAGAAGATTGAAAAGAAGGAGAAGAAGAACAAA CAAATGACACAAAGAATTTTAGAAACTATATATTTTATATTTTTAACAAGCTTCATAGTTCGAATAATTA TGAACAAGCGAAGTTTAAATAAGAGGGGGTTCAACCTACTACCTGAATCCACTACTAACACCATATACCA ATAGCACCGACTTCAATCACTCTTACATAATTATGTTATATATTCCCTGTCTTTCCAAAGATGGTGGGGT CGAAATGACAGCGGTCGACTTGACCTCAATGGACGAGACGAATACGACGACGACGACGATGACGAGCCAG GTTGAGGCGACCAAGCAGGATGAGAACGTCGATGATAAAGAAAGTATTCAAATGGATGACAGTGGGAGAG ACACATTTAAATACAGGAAAAGCGTCAAGCTACTTATACCCATTAGACTCAAGCCTACAAATCAACAATA TTCACCGTTGGATCACTGTGGACTTCTTTCATTCGTATGGCTGTCATGGATGACGTCCTTGTTCTTCAAG GCTTATAAAAAGACGCTCGAGTATGCCGATCTTGGAACGATGTCGGAGTATGACAGAGGCGATTATAACG GAGATAGACTGGAGAGACTGTGGATGGAAGAAGTGGCTCTGAGTGGTAGTGAGGAGGAAGCTTCTATCGG GAGAGTAGCCATTCGCTTTGTAAGGACTAGGCAGATCATATCAGCTGCTGTGCTTGTCGTCGCGCTGATG GCGTCTTTCGTCACATCTGCTGTCCTTGTACATAGGTTACTGGAGTACACTGAGGAGGAGAAGGTCGACC TCTGGTACGGCATCGTACTCGTTGTCTGTATCTTCATCCTCCAAATCGTCCGGATAACGGGCGACGTCTT CTCTCGCTCATTCAACTGTCGAACAGCCACACGTCTACGGAGCGGTATGCTGACTATGGCGTTTCGCAAG CTAGCTAACCTAAGGAGTCTACAGCAACACAGTGTCGGGGAGATTGTGAACATATGTGCCAACGACAGTC AACGTCTCTTCAACGTATGCGTGGTAGGAAACTTCCTGATCTCCTCCCCAGCCTTGCTTCTAGCAACCCT CATTACAACACAGTTCATAGTCGGAACTGGGGCGTTGATCGGGACACTCGCAACATTCATCTTGTTCGTC CCTATGCAGGTCATAGCTGGTAAGACCATATCGAAGATAAGAATACAATGTATCGAGATCATCGATGTCC GTGTCCAGAAGATGCATGAACTTGTCACTTACATTAAACTGATCAAGATGTATGCCTGGGAGCTACCATT CGCCAAGTCAATAAAAGCTTTACGCCGCCAAGAAAAGTCGCATTTGGAAAAGGCGGGAATGTTGCAGAGT TTCAGTCTATCCAACGTTCCCATCATTCCAAGTCTTGCTTCAGTCCTATCCATCATCATCCACATCTATA TGGGCAACTCACTCACTGCAGCTGAGGCGTTCACTCTCGTGTCACTTCTGAACGTTTGTCGGGCTGTTAT TGGACCTGCTCCCTTTGCAGTCCGCATGCTGGCTGAATCTAACGTTGCACTGGATCGACTGAAGTCAATC ATGATCATGGACCAAGCGAAAGCGAATGAGAAGCTTGAAGATAGTAGTGAGAACATGGTTGAAATCAGAG GAGGAGAGTTCGGATGGGATGACATCTCACACAACGAAGATGCGATCCAAGATGACATCACCATGGAAAC TACCTCCGAAGATGAGAACAAAAATGAAGTTATCGACACGAATGGTAGCGGTGAACCAGAAGTGATGATA AAGAACGGATCACACAATGCTGCCGATTCAAATGGAATTAAAGAACAGACATCTGACGTAAAACAACACG AGTGTAATAGTGTGACTGATGAATTCTCGAATAATATTGTATCAGTACTTTTCGATGTCAACTTTGACCT CCCAAATGAACATTTGGTTGGAGTATGCGGATCTGTCGGCAGCGGGAAGTCTTCGCTGGTCAATGCCATC TTAGGTCAGATGGAGAAGGTCAAAGGCACTTGCAAGGTCAGGGGAAAGTTCGCTTACGTTGCGCAGGAAG CCTGGATATTCAACGCCACAGTGCGAGAGAACATTCTCTTTGGAAAACTGATGGACGAGAAGCGTTATGC TATGGTCCTAGATGCCTGTAGCCTCAAACAAGATCTGACGATCTTAACCAATGGAGATGAAACAGAGATC GGTGAGCGAGGAATCAATTTGAGTGGTGGTCAGAAGCAGAGGGTCAGTCTTGCCCGTGCTGTGTATGCTG ATCATGACGTGTATTTCCTAGATGATCCGTTGAGTGCTGTAGACACACACGTCGGAGAACACATCTTCAA GAGGTGCATCAATGGAGTCTTAAACGAGAAAACCATTTTGTTCGTCACACACCAGCTTCAGTACTTACAA GACTGTGACTCTGTAGCAGTGATGATGAATGGCCGAATCAAGGAACAAGGAAGTCACAGTGAACTCATGT CAGAGAAAGGAGAATATGCTCGACTTATCACCACACACTGCACGTACCTCGAAGATATACTCGAAGAAGA AGACGAAGTCTTTTCCTCCAGAACCAGAGAGCGTACTAGACGAATTTCGTCGCCGACGGCGAACAGTGGA AACCAAAGAAGACGGAAATCATCGACAAGCACAACAATGCCACCAATTACACAACGCAAAAGAAAGAGAT CATCAACATCAAGTATTTCGAGTTATGATGACGCAGCTATCGATACTCAAGAAGATGATGGTCAGCTCAT GACATCAGAAATACGGTGTAGTGGACCACCGACCTGGGAGGACTACAGGGGTTACATACAAGCAATGGGA GGCTACATTGCTGCCTACTCAATCATCTTTACCTACATCGTGGTGATTGGGATGCTAACATTTAACAACT GGTGGCTAGCTTACTGGATAGAAGAGAGTAGCAACCGACCGTACAACGAGACTTTGGATGAGGAAGCACC ATCGCTAGTAAACGACCCTCATCTCTGGTTTTACATGCTGGTGTACGGAGGTTCCCTACTTCTCATCTTC ATTGTGGCTGCCAGTAAGAGTGTCATCTATATGAAGCTTACACTAAAAGCATCGTCCACGTTACACAATA ATCTATTCCGAGCAGTTATACGTAGTCCAATTAGTTTCTTTGATACCACACCTACTGGACGAGTGCTCAA CAGATTCTCTAAAGATATAGATGAGCTGGATGTGATGCTGCCAATCAACATGGAAATGAGTCTTAATTAT GTCCTGACGATCGTTGCATCGTTGATCACCATCTGCATAGTATTCCCGTATTTCCTATGCGCCGTCATCC CAGTCATCGTCATCTTCTTCTTCATCATGTCCTTCTATCGCAAGGGCGTCAACGACCTTAAGCAGTTGGA AAACGTGAGCCGATCTCCATGGTTTTCTCACATCGGATCGACTGCAATGGGACTGGCCACCATCCATGCC TATGGCAAGACCAATGATGTTATCACGAAGTTCGTCGATCTACTGGACGTGAACGCATATCCTTTGATGC TGTTCCGGATGGCGAACCGTTGGGCTGGAGCACGTCTTGAGCTACTTGTTGTTCTCATGGTTACCATCAC CAATCTCATGGTTGTTCTCTATCACGGTAAACTACCGGCCTCAACCGCTGGCTTTGCCGTCGCATACGCA ATGCAGCTAACAGGGAAGTTCCAGTTGACAATGAATACGCTGACAGATACCGAAGCACGATTCTCTTCTG CTCAAAGGATAATGCAGTATATAAGGGACATTAAACCAGAGGCTCCTGAAACCATCAAGTCGAGGATGCC CGAGAAAGGCTGGCCAAGTCGAGGGGAGATCCGACTACATCATGTCGGGATGAGATACCGAGAAAACCTT CCGCTGGTTCTCAAGAATGTAACGTGCACTATCAAGGCAGGAGAGAGGATTGGCATCGTGGGGAGGACCG GATCAGGGAAGTCTTCTTTGAGCGTTGCCTTGTTTCGTCTAGTGGAGGCTGTTAAAGGAACAATAACTAT CGATGATGTCGATATATCGGAACTTGGTCTATTTGATCTGAGATCTAAGATATCCATTATTCCTCAAGAT CCTGTCCTATTCATCGGTACCGTAAGATATAATTTGGACCCATTTGGTGAAAATAATGATGCTGATCTGT GGCAAGCATTAGAAAAGGCCTACATGAGGGAGAAGATTAGTTCTCTAGATGGCGGTCTCGATGCTCTTGT TGCAGAAGGAGGAGATAACTTCTCTGTTGGTGAGAGGCAATTGATGTGTATGGCGAGGGCACTGCTTCGG AATAGCAAGATCTTATTCTTAGATGAGGCGACTGCAGCCATTGATACAGAAACAGATAGCTTGATACAGC AGACAATACGAACAGCTTTCAATGACTGTACCACACTCACCATAGCACATCGACTTATTACAGTACTAGA CTCAGATAAGATTCTTGTCATGGATGATGGAAAGGTTGCTGAGTTCGACTCGCCCATAGCTCTACGGGCA AACCCAAAGTCTATCTTCAGGGGGATGTTAGCCGCAGCTGAATCTCAGAACACCTAGCTCAAGAGTCTAT CCAGGAAAGGTGACGTCAGAGGTCGCACTCCGCCGAGTCAGAAAGCAGCGATTGAGAAAGATGTTTAGAG CTTGACGTATTGTTATGGTGCGCTATACAAATGCTTCATATTAGTCTAATTACTGTTTGTACCTCCGGAA TCTTTTATTTCTGCCATAGTTTTATATTTACCTCACATATTTTAACGTACATTGAACAATTGTGCAACAT GGTAGCCATTCAGGAAAACAGTGTCATGGCTGAATCTGAGAACAGCTAGCTAAAGACAAATTATTTCTAA GATATAAGATGGTGTAATTGGCATTAGTTGAATCATAGAGGTATTACAAAATGGAGTCCCAGCTCGCTAT ATTGATTGCATACAGCTGACATAATTGAAAGGATGCACAAATGAATCTCTGAAATGCTTTGATTCTTCGA TGTCGGAGGTTTCACGTCGCCGAGGTAGACAACAGCGATTGAAAAAGATGTTTAGATTTTAAAGTATTAT TATGCTCAATTAATATGATGAATCAAGAAGCACAATAAGTAAACACGCAGTTGCATTATAATCATTTATA GTAACAAAGCCTCAAAGTTTAAAAACTTCTTGATATATAAAGCCTAGAAAGTGTCACAAACATACGCTTC ATGTGCAGAGTTCAAGTCTCTTTCTCATTCATTCCAAGCACTGTAATTCAGTATTTCTATCATGAAAGCT TATTCTGTAAAATAAAACATTTACTATTAATGCCCTCACATGCCCACTCGAAATATTTCCATTTGGTCCG GGATGTTAGGACAATTTAGGGGCAGTGTGATGCAACTTTTAAAAACCCAACACTTTGCCCATTGTTAGTG TCTCTTCGTTGTGCAAGATGAGGCTATCTGAATGTTTTCATCACCCGCATGGGAAGTACATGTACATATT TGTCATGCTTTGTTTGGCGGCACAGAAGCTTCTTTTTTCTTCAAAGACAAGCACGTATAGTAACTCCAGC TGTATTATCTCTTTGGTTTTACAACCTTTCGTGTTTACAGCCAGTACAAGTATACGAGTACATGCCATTG TTACCTCTAGACGTTTTCACCTCTAGAGTTTTTACCTTTGACATGTTTACCTCTGACATTTGTTTACCTC TGACATTTTTACATCTGACATTTTTACACCAAACCATATACATAACACACGCTCCTGATGTACGATTTTT TCTTCTTCTCACTTTGAGTCAGTTCATCAATTTCTAATTGTTTGAGGTAGCGTTTGGAATAGTTAGGCTC AAACTTCAATAAACAGAATATTCATGGCAATAGAATCTCGAGTATGTTCAGATGTGTGGAAATGTAGGCT TTTGTTTCCCTCTTCTGAGGACCCGATAGGCCAATTAGGATATCAATTTTTCGTTTTGTAGTCAAATTTA ATATGTATGTTTTTGTTATGTGCCTCGTTACGAATTGTTGTTTTTTCATTCATCTGTTACGAACAAATTG TATTTTGATATTCAGCATGCAAATTGTACATAATAACGTGTCGTTAGGTATGATAAGCTATAATGTTTGT CCAACCTAGCAACAACTAATTATAATCGGTCTAACTATAAGCCAGTTTGTAGTCGCTAACTTTGCATGGG AAGATAGTGGTCATTTGTACAACATTTTAAAACCCACCTAGTACTGAAATACACTTAGAATGAAACTTAT GTGATCATAATTATAATGCACTGACAGTACGTTATGTGGCACATATGTGGGAGTATTCTTATCATGAGGG TAAACAGCGTTATTTATATAAAAACTGAGTATTATTATCAATATCATAAACAGAAGGTATTCATAAAGTA CATCCATGACTTTGGCAGCGGTGGTTATTTTGAAATGCACAATTTGGGACTACTCCAAGTTTAAAATATT TGTGGATAATCCGGGTCAATTGAACCGTGTGCTTATAACGAACTGGTATATTGAGAGACAGGATCATATC AAATATTTGTGGATAATCCGGGTCAATTGAACCGTGTGCTAATAACGAACTGGTCTATTGAGAGACAGTA TCATATCAAATATTTGTGGATAATCCGGGTCAATTGAACCGTGTCTTATAACGAACCGGTTTATTGAGAG ACAGTATCATATCAAATATTTGTGGATAATCCGGGTCAAGTGAACCGTGTCTTATAACGAACCGGTCTAT TGAGAGACAGTATCATATCAAATATTTGTGGATAATCCGGGTCAAGTGAACCGTGTCTTATAACGAACCG GTTTATTGAGAGACAGTATCATATCAAATATCTGTGGATAATCCGGGTCAGTTGAACCGTGTGCTTATAA CGAACCGGTCTATTGAGAGACAGTATCATATCACAGGTTAGTGTAATAATTCTTTGCTAGGTAAACTTAT ACTTTAATTATATTGTATTTTGTATAACAAATAAAGAAGGTCTTACTATGCAACCATTTTTGGGAGATAA TGCTATCCACTAAAAAAAAGTACTAGTG
Load query from file:
Options
E value
0.1 (Default)
10
1
0.001
1e-5
1e-25
1e-50
1e-100
Number of alignments
25
1
5
50
100
Word size
Default
2
3
4
5
6
7
8
9
10
11
12
13
14
15
Default = 11 for blastn, 3 for all others.
Matrix
BLOSUM62 (Default)
BLOSUM45
BLOSUM80
PAM30
PAM70
Gapped alignment
True
False
Automatically set to False for sequences longer than 4500 bytes
Filtering
On
Off
BLAST time is limited to 30 seconds
