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Echinobase
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041604200.1 PREDICTED: Lytechinus variegatus cAMP-dependent protein kinase type II regulatory subunit (LOC121411455), transcript variant X1, mRNA TAAAGCGCAACGCGCCGTACGCACACACACACACAAAAGTTCACGCAGTTTTTGTAGCGCAGCTGCCATC CAGTTTCAGCAGAAATTGGGTTGCCAACGTATTTTCGCGGGTACCCTAGCGGGGTAGATCAGGCCAGCGT TAGATGCCGGTGTGTGGCTGGTCAACCGACCTTTTATCGCGGGTGTTTTTCGTTGTCGGCTTTGCAGTAG GAACTGTGTTTATGTCTTATTCAAAAGGAGGGCGTTTGAAACTGCAAGGCAGTTTTATCCAGGAGTAAGC AATAGTACGATTTCATAGACGCTTTAGAGAAAGTTTACTTTGGGTCAAGATCTTGCAAGGCTGCTGGATC GGAGATTTTATCTTGTTTACGTTGGACATCTGATCACGGCACGATGAACTTCGAAATACCGGATGGTCTC ACCGACTTGTTGCAGGACTTCACCGTAGCTGTGCTTCGAGAAAAGCCCTCTGATTTAGTCGAGTTCGCTT CGACATACTTTGCTAAGTTACAAGAAAATAACATAAGTTTGGGTGGAAAACGTGGAGTGACTTTCACTGC ACCAGAAGATGCAGAATCTGACATCGATGATGAACCACCAGAACTTCCCAAGAACAGATATGCCAGAAGG AAATCAGTTTGTGCAGAGAAGTATGATCCTGAGGCAGATAATGACACAGATGGACAAAAGCTGGTCTACC CGAAGTCAGATGAACAGAGAGCGCGTCTTACCGAAGCTGTGAAAAATATCCTACTCTTCAGGGCACTAGA TGAGAAACAAATGCAAGAGGTCATTGATGCAATGTTTGAGAAAAAGACGACGCCAGGCGATCATGTCATC GACCAGGGAGATGATGGTGACAACTTCTACGTCATAGATAGAGGAGAATATGATATCTTTGTCAATGATA ACAAGGTTGGAGCTTACAAAGACAGTGGAAGTTTTGGTGAACTAGCACTCATGTACAACACACCAAGGGC AGCAACAATTGTAGCTACTACAGAAGGCATTCTATGGGCATTGGACCGTGTTTCTTTCAGAAGAATAGTA CTAAAGAATGCAGCCAAGAAGAGGCGAATGTATGAAGTGCTACTTGAGAAGGTCTCAATATTCAAATCTC TAGAGCCATATGAGCGTATGAACCTTGCAGATGCATTATTATCAAGGACATACGAGGATGGAGACTGCAT TATTGCTCAGGGAGATGGAGCCGATGGGTGCTATTTTATTGAAGCAGGGCAGTGTAGAATCGCTATGAAG AGCGAGAAAGCAGATAACCCAGATGAAGAGAAGGAAGTTGCAATCTACAATCAGGGCCAATATTTTGGAG AGCTAGCGTTGCTTACCAACAAGCCTCGAGCTGCCTCCGTCTACGCTGTAGGAGATGTCCGATGTGCCTT CCTGGACGTGAACGCGTTTGAACGGCTGCTGGGTCCTTGCATGGACATCATGAAGAGGAATATCGAGCAC TACGAGCAGGAGACATCAAGATTGTTTGGAAAATAACCCCTTCCCCTTCACATAGTCAACCATCCCCAAC CATTCTTTCTGCTTCCCATACCTGTTGCGCAACATTGATTAAATTTCACATCTGAGTTAAGACTGGCTGG CCATTCGCTCACGTAACAGGCATCCGAGATACTAACACAAAGCACATACCTTGGATATCCCATTGATATT GAATGCCAACTTCTTCAAGTTTATGGGATATAGTGAACATGATGATGAAACTTTGAGAAATGTTTATGCA ACTGCTTCGGTCAATTCTTTTTTATTTTTAATGTTAGTCACCTTTCAGGGATATCTTCACAGCATCTGTG CATACTATCAGGGGTTGTTGCAAAACAATTTCTTTACAATCAATTGCAAATGTCATATACAAATTGGCAA ATTGATAGAAGAATACTAGCTAATGCAAACCTATCATGACTTCCAGTTGCAAAGAAAAGCTAATACACCT GGGGCCCGTCTTTCAAAGAGTTGCGATTTATCTGATCCATGTCAATATATAAAATGCATGTTTGTTTTAA AAAAAATTCTAGACATGAATGTATATTTATAAATTCATCGATTTCTTGACAATTTGGTGTGTTCTTCTTT GTTTACAAAGGACATTTTGCAAATTTCCTTTGGAAAGTTATGACACTGTGGGATTTCAGTAGAATTACGA TCAGTTGGATTAATCGTATCTTTTTGTAAGACTGGCCCAGCAGTCAATTACAATTTAGTAATTAATTGCA AGATTAATTAATTTTGGAACCAGCACTTGACTTCCAATCGAAGTTGCTTGCAATACCCCCTGATATATAT CAAACTGTAATGTGTGTAGGCGGTTCCATGTTCTGTCTGTCTGAATTGCCTCCAAAATGAAATCACATCT CAAATGGCCTCTGGGAATTTACAGAAGGTATATGGGCATTGTGAGTGAGGTGGCGTTCTCATGTTTATTT CAGGCCACACCCACTTTTCTAACGTGGCGTTCAAGGACTGGTGTACGTTGAAATCAGATTCACATTATTT TATCAGTATTACAAACCACAGAAAATAATGATCCGATCTCTTAATGAATGGTTTCATTGTTCATATTTTA TGGCTTTGTCGAAGTCAATTGCAGAAACGACAATGGATGGGTTTTATATGTATAAATATATACATAGGAA TATATATGTGTATTTCAAGCTGGTTTTTATTGTCGAACATCATTTATGTCGAGGAGACTGCTCCTCTTGA TGACTTTTAAATCAAAAGTGACATGGAACTTTTGTTGATTTAGTGGTATAAAACATGAATGCAAATTTGC TGTTAATAGTTTGTACATAAAATTATCAAAGAAGTTTTACATGAAAGGTTGTATCTGTTCAATTAATTCA ATATTAGAATATATTTGAGTATTGTGTTTGCTCATTTTCACAAGAACCTTGTGGAGAAGAAAATGGCTCA GCGAATTAATGCAATTTTGAAGTATTTTCTTACACATGGAAAGATCATTAATTGAAATGATTGTTTTGTG GTACGTTCTGTCTAAAGATGTATTTGTTTTTGCTTATATTTTAGTCCAATGTGGTTGATTCTTCCAGGAT TTTTATTGTTGCAAAGTTCAAAGCATTCATTAGATTTATTAGTTGACAGATAAACATATGATGGTACTGT GTAATGAGTGCAACTCTATATTTTTTCAAACAGCTTAATTTGCCACGGTCAAATTTTTATCAGATTGATA TAACCATTATCCATTTTTATGAACTTTGGTTTTTCATACAAGATAAATTACGAAACCAGAATGTATATAT TTTCAGGTGATTTTATAGCCTGATGAATTATCCCACAGTAAATTGGTAGCCTAGGTGACTGTTTCTGTTA AAACACATGAGTGGTCAGAACTAGTTCAGGCAAGATGTTGGATTCTCTAGGTCTTGTGAAAGGCTTTCCC CAAATTAGCTAAAACACATATCTTTAGCTCTGATTTTCTAAAGGTGGTCTACACCTTCCCTGGCCCACCC GCCCTTATTTAAGTTTGTTTTCACATTTGCACAAATTAAAAAAAGATTAAGTACATTATATATGTATGAG GCGCAGAAGGGTATAAATATATGTAAACATAACTTCATGGGTTGTCGCACCTAAGTGCTTTAGCCAGCGT ATGCCGACGTATGTAGGCTATGGCAAGCCGTTCATTTGATCCAATTTCTTGATATCAACCTATAGGATTT TTCATATAAATAATCTGAATTCTTGACGATTTGTGTAGTTTCAAAATGCAATTCTTGGTATTAAGAATGG AATGCTTGATATATATATAAAAAAAATGGATTTGAGGAAAAAACGGCTAGCTACAAGTCTGCTGGCTAAA ACGTCAAGGTGTGAAAGTCCCTTACCTTCCTGTCTCCCAGCAAGTAATATGTTCCAAACATTTTCCCTTA CATTATCCTCTCATTTTCTAGGATTAGCAGAGGGGGTGGGGGCATAGAAAGGGAGAGATAGTCTGTGTGC ATATGTCAGTGTGTCTGCGAGTGTGTGTGTGTGTGTGTTAGAGAGGGAGGGAGGAGCAGAGAAAGAGAGA TTTCATTTATATTTACACAAAAGTTGTAGGTTGCATGTCCTGTGTAACTAAACTAATTGGTGATTTCTAA AATTGTAAAAGATATCACATTTTTTAGTAAAAAAATTTATGTCAGAACTTGCACATTTTATATGGTACAG AGAGCACAGACAGATTTATTGATTACAAAAAAAATTAGCTACGTATATTAAAGTATTTATAAGAGTAGAG AATTCATTATATGATTGCTGTTTGTGTGTTGTTGAAAAGTTATTTACTAATCATCAACCTTGCCACAAAT TGAATCTGGTTATTCAATACGCCTCAAACTTGGGTAACATTTTATTTTTCTGTGTGAGTGCTATTTTACA GGGTTCAGTTGTTGGATCATAGGGCCCAGTGTTACAAAAGAGTTTATGATTGATCTGATCAATTACAGCT ATGGAAAGGCGGTAAAAACAACATTCAACATGCATTTGTCTTGTCAAGGCATTTTCTGAATATGTTGTAT TCTCATACTTGCATCATTGACTCGGTAAAACAGTGTGCTTCATTTGTTTCAAAAGGGACATTGTGTACAT TTCCTTTGCGAAAAATTGTGACATGGGATTTTCATAGTTGTGATTAATCAGTTCAGTTACAATTCTTTGT AAGACGGGACTTCGATTTCTCTGATTGAATCAGATTATTTGCCAACGGTTATGTATTCTGTGAATAACCT GTATAGATATTGGGTATCGATGGGCCTTGTTATTTATATGGCCATATTCATTCAGAATCTTCTACACGAT TTCCAGACTAACAAAGATTTGTTTACGCAAGTGGGTGTACTGTAGAGGGGTATTAACACAAGTTTTTCTT CACCTATTCTTTCATGACTACTCACAATTCTTCCTGTACTAATTATATACTATCCACCCTATATAGCTTG AATAACACACCTTCCACATGCATTATTTGTTGTATCTGAAGAACATTCCATCTTGCCCGAAGTTTAATGT TCTTTCAGTGATAAATATGATCCATTAACAAAGTGATATTTGGATGATGTATTCCCATTACACAATGAAT GGTGCCCTTGTGTAAACAATCATAGGATATTACATGATTAACTCATTAAAATATTGATACATTGTAGGTA CTGGTATGTTTCTTCCGTGTATTCACATTAAAGCTCCATTCAGAAATGGGGAATCAAAGCCCAGCAACAT TTTTTTTCCATGAAGGTTGATTAAAATTGTGCTTTAATGGCCAACTCGATTTAAAGGGCATTATTGCCAT TGTCAATATCCAAAGTTGTGCAGAGTTCATTTGCCAACTTCTTTTAAAATTTGACTGGTACACAACTTTC ATAGCTGACTCCCTTTTGACTGGTACGCAACTTTCGTAGCTAGACGGAAAAAAAAGAAACGTTGCTGGGT TGTTTCCCTTGGCTTTGTTGTGTCAAGTCTGAATGGGACTACTGTAACAGATGATATCCTGGCAAGAATT GGTTGTGTTACTATGGTATTGATGGACACATCAGCTTGTTTCCTTGCGTGAGGGAAGCTGTGTCAGGGCT AGGATTTGATCCCTCGACCTGCCAATCCTTAGCCCTCAAGGCCACAACACTTCTGTTTTTCCAGAAATTA ATAACTTGTTATTGGATGAAATACACTTGGCTTCTTTGTTCTCTTTATAAGGCAAGCAAAACAAGTATCT TTTCTTCAAAATTAATTGTTGTGCAGTAAATGTACCTTTGATTTATCTTTCAAGTGATATGCTGCCAATT AGCATCAATGGACTATTTTATTGTCTGATCAAAAACATGTTACAAGGAGTCAAAATAAAGCATTTTCATA ATCAACCTTGTGGCTGCCATTTTCATGTTGCCATTCTTATCACTATGTTAAAACTTTGAGAAATTCTAAA GTGATATTTTGTCATTGATTTTTTTTTGCGAAGTACAGAGTGTGCTGTATAGGCCAATTACCATGACATC TTGTTCATGACTATTTCATTGTTGATCATATTTTGGAAAAGGTTGGTTTTGTATTTGTTGACAGCATTGT TGTCTTGTCAAAAATGTGTTAGTCATTTCCAAATAAAAATGAGAATCTTAAAAAAAA
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???blast.matrix???
???blast.matrix.blosum62???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds