Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041603824.1 PREDICTED: Lytechinus variegatus inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2-like (LOC121411229), transcript variant X2, mRNA TAGTATTACGAACTGGTACCGTACAGCTGAGTCCATTGCTGACAAGACAAGGTTGTTGAGAGTTGCACTG ACCCAAGACTTCATCATTTATGCCTCATGGAAGTACAAGAATTATCAATACCTCAGAATTCTGCTGGTGG AAACGATAGGGTGAAGTTCACTGTTGGAGAAATTCCAAATGATGCAACATCCCAGGCAAATGCAAACAAT GGACTCAGCACTTCGCCATCCACTGTCTCAAGCCTGTCTCGCTGGGAAGCCATGGAGATCAAACCAAAGG TTGTCGTCGGGATCTGCTGCATGGGGAAGAAAGCCAGCTCAAGACCGATGCGGGAGATCCTCCATAGACT CGAAAAATTTGAGTACATATCCTTAGACATTTTTGATGAAGATATGATCTTGAATGATCCTGTGGAGAGC TGGCCAGTTTGCGATGCCCTCATCTCATTCTTCTCTACAGGCTTTCCGTTACACAAGGCCATTGATTACG CCAAACTCCGCAAGCCATTGGTCATCAATGATCTGGAAGCGCAGTACAACCTACATGATAGGAGGAAAGT ATTTGAGATTCTCTCTCAGGAGGACATACCAGTTCCTAGGCATGGTATCCATGATAGAGATTGTGACCCA GATGATTTCTTCCTTATTGAGAATGATGATGACTTGGAGATTAATGATGTCATCTTCCGCAAGCCATTTG TCGAAAAGCCTGTATCGGCTGAGGATCATAATGTTTATATTTACTATCCATCATCAGCTGGGGGTGGTAG TCAAAGGCTCTTCAGAAAGATGCGCAATCGGAGCAGCATCTATTCACCAGAGAGCCGCATTAGAAGGGCT GGCTCTTATATGTACGAAGAATTCATGCCTACTGATGGCACTGATGTGAAGGTATACACAGTAGGACCAG ACTACGCCCATGCGGAAGCCAGGAAATCACCTGCCCTAGATGGTAAAGTAGAGAGAGACAGTCAGGGTAA GGAAGTCCGTTATCCAGTCATACTGACCAACACAGAGAAGATGATTGCAAGGAAAGTCTGTCTGGCATTC AAGCAAACAGTATGTGGTTTTGACCTGCTGAGGGCCAGTGGACGATCCTATGTATGTGATGTAAATGGAT TCAGCTTTGTCAAGAACTCAAAAAAGTATTACGATGACTGTGCAAAAATCCTTGGGAACATGATCATGAG AGAGTTGGCTCCCAAATATAACATCCCTTGGCAGATGTTCACCTTAGATGAAGAGATACCATACATGCCT ACCACTTCAGGAACTATGATGGAGCTTCGATGTGTGATTGCTGTTATCAGGCATGGAGATAGAACACCAA AACAGAAAATGAAAATGGAGGTCAAGCATCCAAAATTCTTTCGCCTCTTTGAGAAATATGGTGGGCGCTC TAAGGGTAAGGTCAAACTGAAAAGACCTGAACAGCTGCAGAAGATTCTGGATGTGGCAAGATATCTCCTT GGAGAGCTCAAGTGGCAGAAGCACAGGAGTCAGCCTGAGATTGAAGAGAGGGAGTCTAAGCTAGAGCAGT TGAAGGCAGTCCTAGAGATGTATGGCCATTTCTCGGGGATCAATCGCAAGGTCCAGCTCAAGTACCTTCC AAAGGGCATTCTCAAGCACTCCAGCAGCGAAGAAGCTTCTCACTCAGGTTCCGGAGAATGGCCAGATTCA AAAGGGGAACCCTCCCTATTGCTGATATTGAAATGGGGTGGAGAGCTAACTCCAGCAGGTCGTGTTCAGG CGGAGGAATTAGGCCGTGCGTTCAGATGCATCTATCCTGGAGGACAAGGCGACTATGCTGGTTTCCCTGG TTGTGGTCTTCTTCGTCTCCATAGCACCTATCGTCATGACCTCAAGATTTATGCATCGGATGAGGGGCGT GTCCAGATGACCGCTGCTGCTTTTACAAAGGGAATGTTGGCTTTGGAGGGAGAGCTGACTCCTATCCTGG TTCAGATGGTTAAGAGTGCTAATACATCGGGTCTCCTGGACCATGAGAAGGAATCAGTTACCATCCAAGG AAGACTAGATCACTGTTCAAGTACAAGGATGGACACTGCAACACAGCATGCAAAGAATGAAACTTCATTG TGGAGGACCACAATTGACATGGTGAAAGAAAGACTTTGTGAAAGTTTCAGTAAAGACCGAAATTTTGGTC CAAAGGACTTCAGTGAGCTTGCTCCTACTGGAAGTAAGTCTTTACTAGACTCATTGAGTTACATCAAGAA TCCTGTACGTATGTGTGAGAAGGTTCATAGGGTCATCAAGAACCACACCAAGATGATCAAAGACACCATG GAAAACCCTGAAAACAAAGACTTGATGTTATATCATCACGAGACCTTGGAGCTGATGCTGAGACGGTGGG TAAAACTGGAGAAAGATTTCAAGCTTAAGACTGGCCGCTTTGATATCACCAAGGTGCCTGACATCTATGA TTGCATCAAGTATGATATGCAGCATAACTTCATCCTTAAAACACTTGGATTCACCCACATGGATGATCTC TACAACTCAGCAGAAATGTTAGCTGATTTTGTGATACCACAGGAGTATGGCATAACAACCAGTGAGAAGC TGGAGATTGGGAAGGGTATCTGTACCCCTCTACTGAAGAAGATCCGCTCGGACCTTCACCGCATCAATAG CAATGAAGAAACTACCTACCGCCTCAATCCTCTCTACTCTAAGGGTGTGATGTCACCTGATAGGCAAGTC CGCACCAGACTATACTTCACCAGTGAGAGCCATATTCACTCCCTTCTATCGTGTCTCCGCTATGGTGGAC TTTGTGATGAATCTGACCCTAACTGGCAGAACTCTTGTGAGTACCTTGGTGGGATCCGAGAGCTCAACTA CATGACCCAAATAGTCTTAATGCTGTATGAAGATCCTAGCAAGGATCCCTTTTCTGATGATCGGTTCCGG GTGGAGATTCACTTTAGTCCTGGAGCCAAAGACTGTGAGGATGATGAGAACAATCCAGGATGCTGCCCAT TTAGATCTGTCCATAACTCGGGAAATGCTTCACCCTATGAAAACAACTCTGATGAAGATGAACCTTCAAG CTGCATTGATTCATCGGAAGACGATTGCTTTGATCATAAATCAAAGAAAGGTGAAGGAAAGGACAAGGTC ACTACTCTTATCAAGGTCCCAGGCAAAGATAAAAAGATTGGTGGAGGGGCTTCTTTAGCGACAGGAGGTA CTGTTGGAAAACCCTTTCTTCGACTCCCCCAAATGACGATTCCTAATGATACTAGAGCAGCTGATCAGAG CAAGCCAGTTGGAACCCCACCATTATCTTTTCTCTCTGCTGGTTTTGACGACTTGGCGGGAGGAAGTGCT ATGACAAGTAATACAGATGATGATCATTTGAAAGTAACTATCCCTGATCATCCTAATCTACCTAATGTAA GAAGTGCCCCTGAGCTCCATGATCCTAATTGGTATTTCAATGATGATATTCTTATGAGACGAGCTTCAAC TTACTCTGCTGCACACCAAGGTCTAGAGCATCATATACAAGTGACATCGATAAGACCCCTAGAGACTTTG CATAACTCGTTATCTCTCCGTCAAGTTGATGAATTTCTGGCACGAATCACTCGTGATGGTGCTGACACTC CAGATTGCCATACACCTCGCAGCAGCATGCATCTCAACACCTACACACCGCAGCGTGTCAAACCACTCTA TCTGTCCAATCGCGAATCAGACGGCTCCTCCTACTACAGTCGATCGGCCAGTAATCCATCATCTAATGTC TCCAGTGCATTGCCATCTCCGACAGAAAATTCTGGAAAGAACTTTGATTTCTCACTCTTCCTTGAGAGCA TCAAATCACAGCGTGTGTGTCGTGAATCGGAATCCGGACAGGAAGACTACTTCGCCAGCGATGAAGGACA CCATGAAGAAAGCACCAAGGACGACATCCAACTCATGGCAATGCCCACCTTGGATGATGACCTCATTCCA CCAATCTCATGCTGCTGTAAGTCACAAACCTACTCTAGCAGTGGGGCCTCCAACGTCAAAGAGACAACTT CAAAGTGGAAAGGTTCAGAGATACCAATCACTCAGAAGTCTGAAGAGGACGAGGGTTCTTCTGTAGATCC TCAGGAGGAGACGTTGTGCAGTGGAGGTGATGGGAATGGAGAAGTTGTCACAGAGGAGGAGGTATCAACA CCATGTGCTAGTACATCTAGCAATGCTAGTCAGCCTGGTACAACAGCATTTGAGTTCCCTCCAGAGACAT CCAAAGATCACCAAAGTGATGACTTGCAATAGTGTCTTAAGCCATGTTTTGCTTCCATCAGAATAGGTAA TTTTAGATTTGATTGTATGTATTAAATAAAGGCTTGATCAGACATTCAGCAACAAAGCTCAGCAACATTT GGTGTACAAAATTAAAGAAATCCAACTTACAAGGTGTGCTAAATGTGCAAAAGGAGATTTACTCGTATTG CCTGGATCCAATTTAGTGCAAAATAATCCAAATTTGCAAAGACATAATTAAGACGTCCTCTGACGAGTGC CAATTTTAGATTTCATGTGTGTTATTGAGTGTTTACATAAAAGTTGGCCAATTTGTCTTGCAATATTGTA ACAATGAACAATTCTTAAAACCAAGAAACGTTAATCAGAGCTGCCAACTATTAGGACAAAGGAGTAATTT TTTAATGATTTTCACACCTAATTGCGCCATTACACTTTTCAGCGCCAACAGCTATGTAAAGTACTGTAAT ACAGATGATACATTGCGCGGTGGCGAACTCATCCAACGGCGGCAAATACTGCTATTGCATGCATTGTGTC GCTTTGTTTACATTGCTGTGCATGTGATGATTGCCTCGGGCAGCGGCGAATGTTCGTACCATAGATGGCG TGCATTTCCTATGGAAAATTCTTGCATGAATCCATATCCACTCATGTCCACAGAAACAGGAAGTTCTCAA TGCAACAAAGAAATGTATAATACTGCACGGCGTGTAAAAACTTACCTTTTTTATCTCAAAGAAGTTCATG ATTGTGCACAGCATATATTTAATTACTCTTTTTGTCTCATAATTATGACTTTTGAGCTTCTGAATTACTC CTTTTTACTTTCCAAGGTTGGCAGCTCTGGTCAATTAAGATACTTTTATGAGTGCAACTAATGCAAACTT CTTTTACAGTACACAAGCCTGGTATTCATATATCCTCTACCTCCCTTATCTTGTATCATTTTACATTTTG TTTTTCACCACCTATCCGGCTTAGTCATAATCTTGTTGTTTAATGTAAACAATTGTGAAGTATTCATTTT CAATACAGATTGAGATTTCAGCCACGTTGTGTCTTTCAGATAGAGAAGGGCAATGCCAAAGAGTATGTAT ATCAAACTTGTATAGGTGGTATTCTTGAGAAGCCATGGTTTGGTTAACCTTCACTTATCTTGGAGCAAAA ATAGTAACTAAGAATAACAGTAGATACACCCCTGCATTCTAAAATTTAGAGTTTATCAGAATACCACACT ACATGTGGGACATTCCCGGTGGGTGTTTCATAAAGCTGTCTTTAAGTAACAAGCATCTTTACAAATGACT GGTAACCCTTCTTAGGGGAAAAACGCCAATAGAAATCCTGCGTGTATGACTTCATTCGGAAGTAGCTCAT AACTTGTTAAAAGCTTTCTGAAACACCAACCTGGAATTAATTTTCTCTGATCTTTGCAATGCTCTCAAAT CATGATTTAAAAGTGTTGAAATTATTAGGGGTCAGACATTCAGAAAGTGAATAACCCCGATGTTAAAAGT TCAGCCCTCAGGGCACTGTTTCTCAACACAGTCGTAAGTCTTAACTTCTTGACTAGAGTGAGCTACTTGT CTGCAAAACGTTTCACAAAGCCCGCTTTACCCAGATCAGGGACAACCTGACTAAATATTCACAACACCTA AACCTGTCATAACCTTTTTGTAATGATGACAGTGTGATATTTCAAATTGTAATTTTACGTAATCAATTGC AAAAGGTAAAATTGCATTGCAAGTAAGTGGGCTAGGTCATTCAATATTGTAATGCATGGAAAATATGAAA ATTGTTATAAAAATGGCACAAAAACATTTCAAAATTGTAAAATGAATCGATAAAGATTCTGCCATGTCAG GGGACTTGTATTCTTTATCAACAGTTTAGTTTTATTCAGTAGGATTTGTATAATCATGTTTCAATTATGA AAGCTTTAAATAATGTTACATCAATTCTGAATGTGTTTATACATCATTCTACAAGAAAAATATTTATGGT TTGCTTCCATGAACTATGAAAATGATCCCGGGGTACCCACCTAAATCTCCACACAAGGGTTTTGAGTCAT AAAATTCATAATTTCATTTTCTCAGCAATTGAATGCTCAAGTCTTTGTGGTTGAACTTATGTATGATGAA TATTTTGCCTCTCCTATCATTTTTCAATCCTATGAATTCCAATTCATCACTTTTCATGGTTTTGGGTTAG TGACTAAGGCCATATCTCGTCTGCTCTTTCTGCCGATAGTATCATTATCAAGGGATTCTAGTTAGGAAGC CTTTCGTGGAACAGGTTTTGGTGCGAACTCCATGGTTGGATGATAAAGATATATTAATAAGCTACTATTT GTAAAAATATATGCCTGTTGGTACTCCTGATTTCAGGTTATTCTTGAATTTTTGAAGAATTTATCCTGGC TAAGTAATTGTTACCACGCAGGCACACATACACTTCATGCATACACAATCATGTGCATGGGTTTGATCAT GGAATAAAAGATGTAATGAACTGCTAATCATTGTAAATAAGAAAATTATTCTTTTGGCAGAAAGGGGTGT GTAAATATTATGGCCCTCGTCATTCAGCTGAGCCCTAACCGAACCATATAGAGTTGTGTTTTTTATGTTA TGTATCAATAATGTATGCCTATCTCAGGTAATAATATACAGATATTGCCGACCTAGAGTTTGTCCAGACG GGAGTTGATATGACCAGGCAATATCTATTATATTACATAGACTATGTAGATTCACCATCAGTCTTCATTT ATGAAAACTTGAAATGCTTGCTGCAGCTCTGATTCGTCTATAGACGTCATAAAAAAAAAAAAAAATAGAA AAAATACAGCATCAACGTGTGTATCAAGTAAATTGCCTGATTACACAGCTTTTGACGTAATGTGACGTCA AAATTTGGAATATAGAAAATTAGATCCCTGCAGCGATGATCATATGATGGCATATTGACTTTACATACTG ATTCAAATCTACATAACCCATGTAATACATCAAAGTGAGTGATAAAAGCACAATTTCACTCACCAACTTT TGACATTGAATTCAATTCTCTTCATTATTAATGTAGTTTAACCCTAAAAGGACAGGGGGAGCATAATCCC TCAATGATTTGAGTGTCACATGATTGTGTCACATGACTTTCCAGAAAAAATGGCTAATTTTTATGTACAC AAATTATGGAAGGTGAAAACCTAAGAGTAAAATCAAATTCTTACTTGACACTAAGTGGAAAATAAGCAAT TTTTGGCTTGTAGTTTACTTTAAGATGAATGTGCCTGCCACATATTTCAGCGTGATTGTGCGAATGGGAA ATGGGCCATTAGGCATCCCCCCAATACATCTCAAATAACCCAGTCCTTTTAGGGTTAAAACCAGATTTGT TTTATGCAATCACATTTTCTGTAATTGTGTGTGAATTCTTCTAATTATATATTTTCACAATGACAGAAAT AATTTTGTTTTGACAGAACAAAATATTGAACTTGCCGTTGAATGTTTTTAATGTAGATTGAAGATGTGCA AATAAAAAGAA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds