Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030990477.1 PREDICTED: Strongylocentrotus purpuratus insulin-like growth factor 2 mRNA-binding protein 1 (LOC576835), transcript variant X3, mRNA ACCGGCTCAGCCCATTTATCACACACACAACTACCCACACACTTCTCTTCCCTCACACCGGAGACACATC TAAATTTCATAAATTTCCGTTCATTCCCAATTCAAATAATCAGCAAAATGAACAAGCTGTATGTAGGAAA ACTTAGCCGTGATGTAACTGAAGACGAGCTTCGAAAACTCTTTGAGGACAACGACATCCCAGTCCAAGAA ATCCTGATGAAGAAAAATGGATTTGCATTTGTGGACGTTTCCAACGAAGAGTTGGTCGAAAAGGCCACCG AAAAACTGAACGGTTATCATCTACAAGGAGGGCACATCAAAGTCGAGCCATCAGTTCCAAGGAAAGCAAG AAGTCAAATGGAGAATGGATCCACAGGAAACCAGGGGTTGAAGATCATCATCATGAATGTACCAACAAAA GTTGAACACAAAGAGATTGAAAAGCTTGCTACAACCTTTGGAACTGTCACACTTTTTGAAGCCTCCCCGT CCAAGAATGATAGTGGTACATATGCTGTGGTAGTGACCTATGAACTACCAGAGCAAGCAGAACAAGCCAT CAGACAACTCAATAATTTTGAATACCAGGAGTCCAAACTCAGGGTCAAATTCAAGAATGGTGGACGTGGT GGACCAGGAGGTCGCTTTAATAACAGGAACCAAGGAGGCCCTGGAGGCATGTACCACCAGCAACAGAATG TACCAGATACATCCAATTTCCCTGTCAGAATTCTTGTCCGAAGTGAATTTGTAGGAGCAATCATTGGAAA GGGTGGCAACAACATCCGAGCAATCACCAAGGAAACAGGATGCAAGGTTGACATCCACCGAAAGGACAAC ATTGGATCATCAGAGAAGGTACAGGCTGTAACAATCTGTGGAGAGCCCCAGCAGGTGACAGAGACCATCA AGAAGATCGTTGAAGTCATGATCAAGGAAAGCAGCGAGGAATCTCACACTGATATGCCTCTGAAAGTGCT GGCCCACAATGCCCTTGTCGGTCGTCTAATTGGAAAGAGCGGATCATCAATTAACAGCATTATGGAAGAT TCCAAGGCCAAGGTCACCGTTTCTCTGATCCAAGACCTGACGGTGTTCAACCCCGAGCGTACCGTGACCA TCTACGGCACCCCCGAGCAGTGCATCGCCGCCGAGGCGTTGATCAGCAAGAAGCTGCGTAAAGCCTACGA GAGCTACATCCAGAACCTCCAGCCCCAGCAGCACGACCTGTTCCCTGGCCTGAATCACATGTCTCTCATG TCAGGTGGTATGCATCATCCTGGACAGCAAGGCCCACCAGGACCACACTATGGAGGACACGGTGGACCTG GAGGACCATTCGATGGTGGTCCCCACTATCCTAACCAGCCCCCAATGAATATGCCACATGGTGGACCCCA GCAAGGCGGCGGCGGCGGCGGCGGCATGAACCAAGAGCCTAGTGAGACGACGTACCTGTTTGTGCCCAGG GAAGCTGTAGGTGCCCTCATCGGAGTAGGAGGAAAGAACATCAGGAACACTGCTCGTGCCTCAAACGCTA CCATCAGGATTGCACCAGCTGGCAATGAAGATAGCAATGAGCGTTGTGTGAAGATCATTGGAACTCCAGA ATCTCAGTGGCGTGCTCAGTTTTACATCTACGATAGAATCCGCTCTGAGGGAATCCTTGGCAGTGGAGAG GTTCATCTAAGGTCAGAGATTGCTGTACCATCTCAACTTGTTGGGCGCATCATCGGCAAGAGGGGACAAA GGGTGAGGGAGCTACAGCGTGTTACCGGAGCTCGTGTTGAGGTCCCACGTCGCAGGGGGGACGGAGCTGG AGATGAGGGCAGCGGCACCCCTGAACCACCAACAGAAAGCAATAACCAAAATGGAAACAACAGTGGAGAT GTAGTCGTCAAGCTGGAGGGACACTTCTATGCTAACCAGGCCGCTCAAAGACGCATCCGTCAAGCCCATC AAGAGTACGTCCAACGCCAAAACTTCCAGGGTAGACCAGGTGGCAGACGTTTCTATCGTGGTGGACCAAA CAACCAACATGGTGGACCAAACCAACAGCAACAGCCACAACAGCAGCAGCAACAACAGCAGCAACAGTAA CAACATCCTGTTGCAGCCACTGGAATGACATCACCAAGGGAATTAAAAATTAAGTAACGGAAATTTTAAC GTAGTAAGGGGAAGCATAAAAAAAGAGATTTCAAGCACTGCCAAGCATTGTTAATGAATTTGTTTGAAGA AAAAAAAAGTGCAAAGAAGATAAAGAAGAAGTGAAATTAAACCATTTTACAAACACTTCAAAAGAAATAG AATTAAAGAGAAAAAAAAGATGAATTGTTAAATCTTGGCAAGTGTGTGAAGGAGTATATATATATGTGAG AGTGTGTCGATGAGAAAGAGAGAGAGAGAGAGAGAGAGTGTGTGTGTGCGTGTATGTGTGTTTGTTAGTT TGTGTGTGAAAGTAAATGACCACAGTTTGTGACAATTTAACTGTGATCATGTGCAAGAGCACACAATCTT GAACTTTGAAAGCTTATGAAGTATTTGCCAAAAGAAACATGGACAATGTAAAAGAGATGTAACGTTGTCC TAGTAGGATGGGTGGGGTTGGGTTTGGGATTGGGATTTTTTTTTGGTTAATGTCTTGGCAGGATTATAGT AAGTTGAAGTCTACTTCTCAATTTTGCCACCCTTTCCGCGAGAAGATAAGATACCATAGTTTCCACGATG CTTTCACCATTACAACTTGGGGCCATTTAAAGTGGTCGGTTTTGAGTTTGATTGATGAAGAGTAATGAGA TTGTTTTTTGAAAGCATCATGGAAATTGTAATCCCATTCATATTTGTCTATAAACATGAATAGAAAAGGG TGGATTCTTGAAGGCCATTTCTTGTTTCTGAATTTGATATTGGACCTACCTCAGTTTTCTCTTCCAAACA TCCCTCTAGGCAGTAGACCAGAAACATTTCATGCAGAAGAGTTTAAAGGGGTTAAAACCTACATTTATAT GGAAAATTTCAATCGAGAAGTGACTGTGAAATGAAAAGAGTTGTGGAACATTTTTTTTTTACTCCAAATT TGCTGCTTGGGTGTGTCTAAAGATGATTGCCTTATTGTACAACCGTACCTCAAAGTGTAATTAGGGGTTT TCTTGAATGTAGGGCGAGGTATTGAGATGGCTCTTCTGCATGAAACAAGAAATAGTCTTCAAGTTTAATC ATTAATGTAACAAACCTTGACTTGTGCAGCAAAACACACAATTGTAACTAAAGAAGGCGAATAGTTTGAC CTCCCGATGATGGGGGAACTCAGAACAATCTGCTAGATATTGATTGACGACAAGCAAACAACATTCCGGC AACCAATTAGTTTTTTTAAATGTTAGAGAAGGATTTTCATTTTGTTTTCAGCGAGGATAATGATGCTGAG AGACATACAAACATGGGTTGGGATTTATTGTGTGTTTATTTATTTTTTTCCCTTTTTCCTTGACTTTTCT AAATTCTTGCAGAGTTTCTCAGATGTATTGATGAAATTCTGAGATGACTGTATATTTTATGGCCAGTCAA AGTTATAAGAAAGAAAGAAAGAAAGAGAAAGAAGAGTTTATATTTCTTACTTTATTTTTTACTTTTGATA TAAAAAAATAGAAAAAAAATATGAATGAAACGGTCCAATTGAAAAAGCCAATATAGACGTGTCAACTCCT ACCCACTTTTCATGGACACATGGGTTGGGTTTGATCAGGATCTGCACAACTCCTTTATTAAAAAAGAAAA GAAATTTAATCAACCCATGTAGTATTTAAAAAGCAGGGAAATAATGATATTTTTGGTGCCAAATGTTTTT GCTTTGCTGGTATCTAATTGTTTGATGATACGAGTGGGGTCTGTTCTACCCTCCAAGTTTTTGTTAATAA ATAGCAGAATAAGAAAGTGTTACCGTGTAAAGGCAGTACAGAAGGGGTCAAAGGTCATGGTGATTTTTGT CCAGGTACGCTGCCACCATAAGTCAAGTTAAAACTGTTTCCACAACCTTTCAACATCTAAGGGAAACACA AAAGTTATTAAAAAAAGAAGAGAAAAAAAATCAACAGAAAAATGGAAAAAGCAAAAAAAAAAGGTTATGT CAGGGCAAGAGTGCCCATCGTATAAAACAACATCGGCAGTGTTTAGTGTCTGCCGGCTTGATTTCTTCAC CCATCGGTCATACACAACTCTTGGGTAGATCTATACGAAAGAAACGTGATGTCAGCATTCAATCTGGCTG CATCTTCCTAAGCCATGTGTACATCGTTTCTGTGTCTGTGCAGTCGAGTCCTACAAACGGACAACAGAGT CAGGGGACATTAGCAGAACATTTCTGTTTGACCTTATTTCATTTGAGGATCGGGTCTCCGACCCCCAAGT AGTCGGCTGTACCTCGCAGACGAGACGATGTAGGATGGATATTAATTTCTTGCGCAAGTAGTCACAAGTG GAGTATCTATATATTATGTGATTTATTTTCTTTCCTTTTTGTCATGTTTCCTAGTCAATGATTGAATAAT GTTGTATTTACTTGTAATTAGTAGAGAGCAGAATGAGACATGTTACAGACATGCTTAATGGGATGTAGCG CGAACCAGTTACATTGGCATGTCGTGCTCACGTATGTTTAGTCTTAACTAACAACCAACACAATGTAATG TATTAAAGAAGTCTTGATTGAGTTTGTGAGTTGAGTTAAAGCAGACTTTCTTGTATGTTATACTCACACA GACATCAAACATCACATAAGTCTGTACTCTGTAGTTTAAAATGCATGGTAGATATTAAGAATCACAATAT GTATGAATGGTTCATAAGGTTGCATTATCTGTAGAAATATATACCGTACCTATAAAGTTTTTTTCCGTAG TGTTTATTTTAGTGCTTTTTACGACTTCTCCCAACCAGATATCTCTGTAGATTGTGAGTGAGGTTGTGAT TTTAAGAGCCTCTTTCTATTCTTATAGGGAATTGGGCTGGATCAATATGTAGCGATGCCCAGAATGATAT GCTTATATACAGTGAAACTTCAAATAGGCAACCAATCAGCTGTAGGGTAAATCTAGAAAAAATAGTCAAT GCATGCAATTTATTTGTGTAGTACTGTTTGTCTTTTGCACCTTAACACTCGTCACAATGGTCTTAACATT TTGCATACCCTCATTGCCGGTACAAATAGAAGTCAAATTATACTTATATAGCATATTTTTTTGAGCATTT CAAAGTTTTCATGAAGATTTTCTTTCGGGGAATGGATTCATAATCATTTGTGGACTGCATGCAGCTGTGC TGATGCATCCAGATTCTTGTACAGTAGTTTTCAAATACTCTTTAAGGAATTACTATATACTTGTTATTGA AAATTTTGGAAGAGGAATTTTTCGAATGGAATATTTTGGATTTTTGTTATCTCTCTCCAATCAAATGTAC ATTTTTGTAGATTTAGAATTGACATTTGCACCATTTTACAATTTTTCATTCTTATGCAGTCGGGCAACCT CCACTTGTGACTTCTTGTGTATTGCCGTCGTGAAATTGATTTATTTCACGCATCATTCATAGAATCGATC TAGCATGTTTTTTTGTTTTAAGTGATTGTGAATTCCAAATGATAACATGGTATACGAGCATTTGGTTGAT GTGAAATAATGCCTTAATTACATCTTATGAATGTTGAGTTAAAGGGCAATCCAACCCTTCAATTGTATGA AAGCATGAAAACAAGATAAGCAGAACAGTGAGAGTTTGAATTACTGATACAGCCAATTTGAAGAGCCCAT ACCTCTATAGTGATTACATCTGTCAAAAATTCATAACTTTCTTAGTTTTTGTCCGATTTCGTTCAAACTT TTGCCAGTCTGCTCGTCTTATTTTTCTGCTTTCCTTGGCTCCTAGAGTAGTTTGCTAGCGCGGTTGGATT TCCCTTTAACGACACAGATACACACTACCTCTACAGTAAGTCAGCAGGTCACCGACTGACCCACGTCAAT GGAAGGACGTATGACATTGCAGTATCAGCGACTGACTGCTGCATGGTGAATAACACGGGTGTTAGATATA TATATATTTCCATGTGGCACGCGCAGTCAGTGCTCAAAGCCATTCACTCTTTCATTGGTGCGGGTCAGTG GAATATTTGCTTTGAAGCTTGTAAGCAGAAGAATTCTTTACTCAGAAAACATTGATATCGTCGTCATATG CCAATAACCCATTATGTTCATTGATTGAATCTGGAATGTGTCTTACAAAATTCTAGTTTTGTGGGTAGCA TGGGGTAAATGTCTTTGATACACGACTGAATGGCTGGTCTACATTCCATCATTCAAAAACACAAAGGCTG TATGTTTTAGTGTGTATTTAATTTTCTAAAACCAACTGCTGCTGTCGAATTATTCCATTGCGTTCTGTTA TCCGTGAAGAAGAACATTTGGAGGGAAGCCGTGATATAGTTGGAATGCCTTTAAAGGCTGAAGCCATTCA TACGTTTGTTGTGTTAGCTCACATCTACCAGCGTAAGAGGATGTAAAGTTATCGTTTATAACAAGATTCA GAATACCACTGCAAAAAAACGTTTTGAAATCATTTTTCTTGTAAATTTTAAACTGGTTATGATCTGTGTG TTTCATTCACAGAGGTGGTTGTTGCAGGTATAGTTGACATACATGTATGAAAGCAACAAACCATCGCTTT GGAGTATGGTACATACAACGACAGTTATTGTTTCCTGGTAAGCTAGATCGAGTTCTATCCACTGTAAACC TGGACCTGTAAGGATAAGAAACTCATTTCTTGTTGAAACCTTAGGAGTACATTGAGACATAAACAAATTC TGGGTTTTTATTCTGTTACATGTCCGGTTAACAGATTTAAATGTTGTATAATCATAAGGAAAAAAATGGT TATCTAGTAAACATTCATTTACCGCCCGTTTGCCATTTGTTCATTTACACATTTTTTTTTCTGTTGTTTC CGAAACATTGGAAATAAATTATTCAAGTTAGAAACGCC
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds