Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030990478.1 PREDICTED: Strongylocentrotus purpuratus insulin-like growth factor 2 mRNA-binding protein 1 (LOC576835), transcript variant X4, mRNA ACCGGCTCAGCCCATTTATCACACACACAACTACCCACACACTTCTCTTCCCTCACACCGGAGACACATC TAAATTTCATAAATTTCCGTTCATTCCCAATTCAAATAATCAGCAAAATGAACAAGCTGTATGTAGGAAA ACTTAGCCGTGATGTAACTGAAGACGAGCTTCGAAAACTCTTTGAGGACAACGACATCCCAGTCCAAGAA ATCCTGATGAAGAAAAATGGATTTGCATTTGTGGACGTTTCCAACGAAGAGTTGGTCGAAAAGGCCACCG AAAAACTGAACGGTTATCATCTACAAGGAGGGCACATCAAAGTCGAGCCATCAGTTCCAAGGAAAGCAAG AAGTAACAGGTTGAAGATCATCATCATGAATGTACCAACAAAAGTTGAACACAAAGAGATTGAAAAGCTT GCTACAACCTTTGGAACTGTCACACTTTTTGAAGCCTCCCCGTCCAAGAATGATAGTGGTACATATGCTG TGGTAGTGACCTATGAACTACCAGAGCAAGCAGAACAAGCCATCAGACAACTCAATAATTTTGAATACCA GGAGTCCAAACTCAGGGTCAAATTCAAGAATGGTGGACGTGGTGGACCAGGAGGTCGCTTTAATAACAGG AACCAAGGAGGCCCTGGAGGCATGTACCACCAGCAACAGAATGTACCAGATACATCCAATTTCCCTGTCA GAATTCTTGTCCGAAGTGAATTTGTAGGAGCAATCATTGGAAAGGGTGGCAACAACATCCGAGCAATCAC CAAGGAAACAGGATGCAAGGTTGACATCCACCGAAAGGACAACATTGGATCATCAGAGAAGGTACAGGCT GTAACAATCTGTGGAGAGCCCCAGCAGGTGACAGAGACCATCAAGAAGATCGTTGAAGTCATGATCAAGG AAAGCAGCGAGGAATCTCACACTGATATGCCTCTGAAAGTGCTGGCCCACAATGCCCTTGTCGGTCGTCT AATTGGAAAGAGCGGATCATCAATTAACAGCATTATGGAAGATTCCAAGGCCAAGGTCACCGTTTCTCTG ATCCAAGACCTGACGGTGTTCAACCCCGAGCGTACCGTGACCATCTACGGCACCCCCGAGCAGTGCATCG CCGCCGAGGCGTTGATCAGCAAGAAGCTGCGTAAAGCCTACGAGAGCTACATCCAGAACCTCCAGCCCCA GCAGCACGACCTGTTCCCTGGCCTGAATCACATGTCTCTCATGTCAGGTGGTATGCATCATCCTGGACAG CAAGGCCCACCAGGACCACACTATGGAGGACACGGTGGACCTGGAGGACCATTCGATGGTGGTCCCCACT ATCCTAACCAGCCCCCAATGAATATGCCACATGGTGGACCCCAGCAAGGCGGCGGCGGCGGCGGCGGCAT GAACCAAGAGCCTAGTGAGACGACGTACCTGTTTGTGCCCAGGGAAGCTGTAGGTGCCCTCATCGGAGTA GGAGGAAAGAACATCAGGAACACTGCTCGTGCCTCAAACGCTACCATCAGGATTGCACCAGCTGGCAATG AAGATAGCAATGAGCGTTGTGTGAAGATCATTGGAACTCCAGAATCTCAGTGGCGTGCTCAGTTTTACAT CTACGATAGAATCCGCTCTGAGGGAATCCTTGGCAGTGGAGAGGTTCATCTAAGGTCAGAGATTGCTGTA CCATCTCAACTTGTTGGGCGCATCATCGGCAAGAGGGGACAAAGGGTGAGGGAGCTACAGCGTGTTACCG GAGCTCGTGTTGAGGTCCCACGTCGCAGGGGGGACGGAGCTGGAGATGAGGGCAGCGGCACCCCTGAACC ACCAACAGAAAGCAATAACCAAAATGGAAACAACAGTGGAGATGTAGTCGTCAAGCTGGAGGGACACTTC TATGCTAACCAGGCCGCTCAAAGACGCATCCGTCAAGCCCATCAAGAGTACGTCCAACGCCAAAACTTCC AGGGTAGACCAGGTGGCAGACGTTTCTATCGTGGTGGACCAAACAACCAACATGGTGGACCAAACCAACA GCAACAGCCACAACAGCAGCAGCAACAACAGCAGCAACAGTAACAACATCCTGTTGCAGCCACTGGAATG ACATCACCAAGGGAATTAAAAATTAAGTAACGGAAATTTTAACGTAGTAAGGGGAAGCATAAAAAAAGAG ATTTCAAGCACTGCCAAGCATTGTTAATGAATTTGTTTGAAGAAAAAAAAAGTGCAAAGAAGATAAAGAA GAAGTGAAATTAAACCATTTTACAAACACTTCAAAAGAAATAGAATTAAAGAGAAAAAAAAGATGAATTG TTAAATCTTGGCAAGTGTGTGAAGGAGTATATATATATGTGAGAGTGTGTCGATGAGAAAGAGAGAGAGA GAGAGAGAGAGTGTGTGTGTGCGTGTATGTGTGTTTGTTAGTTTGTGTGTGAAAGTAAATGACCACAGTT TGTGACAATTTAACTGTGATCATGTGCAAGAGCACACAATCTTGAACTTTGAAAGCTTATGAAGTATTTG CCAAAAGAAACATGGACAATGTAAAAGAGATGTAACGTTGTCCTAGTAGGATGGGTGGGGTTGGGTTTGG GATTGGGATTTTTTTTTGGTTAATGTCTTGGCAGGATTATAGTAAGTTGAAGTCTACTTCTCAATTTTGC CACCCTTTCCGCGAGAAGATAAGATACCATAGTTTCCACGATGCTTTCACCATTACAACTTGGGGCCATT TAAAGTGGTCGGTTTTGAGTTTGATTGATGAAGAGTAATGAGATTGTTTTTTGAAAGCATCATGGAAATT GTAATCCCATTCATATTTGTCTATAAACATGAATAGAAAAGGGTGGATTCTTGAAGGCCATTTCTTGTTT CTGAATTTGATATTGGACCTACCTCAGTTTTCTCTTCCAAACATCCCTCTAGGCAGTAGACCAGAAACAT TTCATGCAGAAGAGTTTAAAGGGGTTAAAACCTACATTTATATGGAAAATTTCAATCGAGAAGTGACTGT GAAATGAAAAGAGTTGTGGAACATTTTTTTTTTACTCCAAATTTGCTGCTTGGGTGTGTCTAAAGATGAT TGCCTTATTGTACAACCGTACCTCAAAGTGTAATTAGGGGTTTTCTTGAATGTAGGGCGAGGTATTGAGA TGGCTCTTCTGCATGAAACAAGAAATAGTCTTCAAGTTTAATCATTAATGTAACAAACCTTGACTTGTGC AGCAAAACACACAATTGTAACTAAAGAAGGCGAATAGTTTGACCTCCCGATGATGGGGGAACTCAGAACA ATCTGCTAGATATTGATTGACGACAAGCAAACAACATTCCGGCAACCAATTAGTTTTTTTAAATGTTAGA GAAGGATTTTCATTTTGTTTTCAGCGAGGATAATGATGCTGAGAGACATACAAACATGGGTTGGGATTTA TTGTGTGTTTATTTATTTTTTTCCCTTTTTCCTTGACTTTTCTAAATTCTTGCAGAGTTTCTCAGATGTA TTGATGAAATTCTGAGATGACTGTATATTTTATGGCCAGTCAAAGTTATAAGAAAGAAAGAAAGAAAGAG AAAGAAGAGTTTATATTTCTTACTTTATTTTTTACTTTTGATATAAAAAAATAGAAAAAAAATATGAATG AAACGGTCCAATTGAAAAAGCCAATATAGACGTGTCAACTCCTACCCACTTTTCATGGACACATGGGTTG GGTTTGATCAGGATCTGCACAACTCCTTTATTAAAAAAGAAAAGAAATTTAATCAACCCATGTAGTATTT AAAAAGCAGGGAAATAATGATATTTTTGGTGCCAAATGTTTTTGCTTTGCTGGTATCTAATTGTTTGATG ATACGAGTGGGGTCTGTTCTACCCTCCAAGTTTTTGTTAATAAATAGCAGAATAAGAAAGTGTTACCGTG TAAAGGCAGTACAGAAGGGGTCAAAGGTCATGGTGATTTTTGTCCAGGTACGCTGCCACCATAAGTCAAG TTAAAACTGTTTCCACAACCTTTCAACATCTAAGGGAAACACAAAAGTTATTAAAAAAAGAAGAGAAAAA AAATCAACAGAAAAATGGAAAAAGCAAAAAAAAAAGGTTATGTCAGGGCAAGAGTGCCCATCGTATAAAA CAACATCGGCAGTGTTTAGTGTCTGCCGGCTTGATTTCTTCACCCATCGGTCATACACAACTCTTGGGTA GATCTATACGAAAGAAACGTGATGTCAGCATTCAATCTGGCTGCATCTTCCTAAGCCATGTGTACATCGT TTCTGTGTCTGTGCAGTCGAGTCCTACAAACGGACAACAGAGTCAGGGGACATTAGCAGAACATTTCTGT TTGACCTTATTTCATTTGAGGATCGGGTCTCCGACCCCCAAGTAGTCGGCTGTACCTCGCAGACGAGACG ATGTAGGATGGATATTAATTTCTTGCGCAAGTAGTCACAAGTGGAGTATCTATATATTATGTGATTTATT TTCTTTCCTTTTTGTCATGTTTCCTAGTCAATGATTGAATAATGTTGTATTTACTTGTAATTAGTAGAGA GCAGAATGAGACATGTTACAGACATGCTTAATGGGATGTAGCGCGAACCAGTTACATTGGCATGTCGTGC TCACGTATGTTTAGTCTTAACTAACAACCAACACAATGTAATGTATTAAAGAAGTCTTGATTGAGTTTGT GAGTTGAGTTAAAGCAGACTTTCTTGTATGTTATACTCACACAGACATCAAACATCACATAAGTCTGTAC TCTGTAGTTTAAAATGCATGGTAGATATTAAGAATCACAATATGTATGAATGGTTCATAAGGTTGCATTA TCTGTAGAAATATATACCGTACCTATAAAGTTTTTTTCCGTAGTGTTTATTTTAGTGCTTTTTACGACTT CTCCCAACCAGATATCTCTGTAGATTGTGAGTGAGGTTGTGATTTTAAGAGCCTCTTTCTATTCTTATAG GGAATTGGGCTGGATCAATATGTAGCGATGCCCAGAATGATATGCTTATATACAGTGAAACTTCAAATAG GCAACCAATCAGCTGTAGGGTAAATCTAGAAAAAATAGTCAATGCATGCAATTTATTTGTGTAGTACTGT TTGTCTTTTGCACCTTAACACTCGTCACAATGGTCTTAACATTTTGCATACCCTCATTGCCGGTACAAAT AGAAGTCAAATTATACTTATATAGCATATTTTTTTGAGCATTTCAAAGTTTTCATGAAGATTTTCTTTCG GGGAATGGATTCATAATCATTTGTGGACTGCATGCAGCTGTGCTGATGCATCCAGATTCTTGTACAGTAG TTTTCAAATACTCTTTAAGGAATTACTATATACTTGTTATTGAAAATTTTGGAAGAGGAATTTTTCGAAT GGAATATTTTGGATTTTTGTTATCTCTCTCCAATCAAATGTACATTTTTGTAGATTTAGAATTGACATTT GCACCATTTTACAATTTTTCATTCTTATGCAGTCGGGCAACCTCCACTTGTGACTTCTTGTGTATTGCCG TCGTGAAATTGATTTATTTCACGCATCATTCATAGAATCGATCTAGCATGTTTTTTTGTTTTAAGTGATT GTGAATTCCAAATGATAACATGGTATACGAGCATTTGGTTGATGTGAAATAATGCCTTAATTACATCTTA TGAATGTTGAGTTAAAGGGCAATCCAACCCTTCAATTGTATGAAAGCATGAAAACAAGATAAGCAGAACA GTGAGAGTTTGAATTACTGATACAGCCAATTTGAAGAGCCCATACCTCTATAGTGATTACATCTGTCAAA AATTCATAACTTTCTTAGTTTTTGTCCGATTTCGTTCAAACTTTTGCCAGTCTGCTCGTCTTATTTTTCT GCTTTCCTTGGCTCCTAGAGTAGTTTGCTAGCGCGGTTGGATTTCCCTTTAACGACACAGATACACACTA CCTCTACAGTAAGTCAGCAGGTCACCGACTGACCCACGTCAATGGAAGGACGTATGACATTGCAGTATCA GCGACTGACTGCTGCATGGTGAATAACACGGGTGTTAGATATATATATATTTCCATGTGGCACGCGCAGT CAGTGCTCAAAGCCATTCACTCTTTCATTGGTGCGGGTCAGTGGAATATTTGCTTTGAAGCTTGTAAGCA GAAGAATTCTTTACTCAGAAAACATTGATATCGTCGTCATATGCCAATAACCCATTATGTTCATTGATTG AATCTGGAATGTGTCTTACAAAATTCTAGTTTTGTGGGTAGCATGGGGTAAATGTCTTTGATACACGACT GAATGGCTGGTCTACATTCCATCATTCAAAAACACAAAGGCTGTATGTTTTAGTGTGTATTTAATTTTCT AAAACCAACTGCTGCTGTCGAATTATTCCATTGCGTTCTGTTATCCGTGAAGAAGAACATTTGGAGGGAA GCCGTGATATAGTTGGAATGCCTTTAAAGGCTGAAGCCATTCATACGTTTGTTGTGTTAGCTCACATCTA CCAGCGTAAGAGGATGTAAAGTTATCGTTTATAACAAGATTCAGAATACCACTGCAAAAAAACGTTTTGA AATCATTTTTCTTGTAAATTTTAAACTGGTTATGATCTGTGTGTTTCATTCACAGAGGTGGTTGTTGCAG GTATAGTTGACATACATGTATGAAAGCAACAAACCATCGCTTTGGAGTATGGTACATACAACGACAGTTA TTGTTTCCTGGTAAGCTAGATCGAGTTCTATCCACTGTAAACCTGGACCTGTAAGGATAAGAAACTCATT TCTTGTTGAAACCTTAGGAGTACATTGAGACATAAACAAATTCTGGGTTTTTATTCTGTTACATGTCCGG TTAACAGATTTAAATGTTGTATAATCATAAGGAAAAAAATGGTTATCTAGTAAACATTCATTTACCGCCC GTTTGCCATTTGTTCATTTACACATTTTTTTTTCTGTTGTTTCCGAAACATTGGAAATAAATTATTCAAG TTAGAAACGCC
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds