Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030995149.1 PREDICTED: Strongylocentrotus purpuratus adenylate kinase 9 (LOC588475), transcript variant X3, mRNA AGCTCACGCAATACGGCCGCGGATCAAACTCGTTGAATCTCCATGGAGATCGTGAAAAACTATGGCGGAG AACGAGGAAGAAACAAATTTACCCCAGTTTGGGGCACCAACCCCAAGTGTAACAATAGACATGCTGGAAA CCCGCCCCAACACTCACATTTTGCTGGACTCTGTAACGCCAGCGGCTGGAGAAGGCAATCACAGAGGGGC CAGCAGGCTTGACCCTGCAGGAGGTGTGATGAGTAGGGCACTCAGTGTTGTGAGTGGAAGCAATGCCCAG GAAAGTCACATCTCAGAGTTGATGAAGCGCATGGAGGAAGATCCCTTCGATGAAGACCAGACTGAGCTTC GGTTCCTTCACTCCAAACCCACCTGCTTCATCATCCTGGGCAAACCAGGTGTGGGCAAGACCACCTTAGC CAAGAGACTAGCCCAGGCCTGGAGATGTCAGATGGTGAATGTAACTGAGCTGATGCTGCAGCATATAGAC CTTCAGACTGAGATGGGTGTGAGACTACAGGAGATCCTTCATAAGGGTGGAGCAATCCCTGAAGAGCTAG CCGTCAAGCTTATAGAAGATAAGATTAACTCACCAGAAGTGGCACATCACGGTTATGTCTTGGATGATTT CCCCTGTGTGAATGAAGAATACATGAATGTTTCAGATCAACTAGAGTTTGTCAAGAATTGGAAACTTAAA CCAGATTTCATCATCAACCTTAGGATACCAGATGCAGACCTTGAAATGAGGAGGGTTGGTCAGAGAGTGG ATTCTCTCAACAACACGCTCTACGCCCAGGAGGTATGGAACCCAGAGAAACCAGAGACTCAGCAGAAGAA AGGAGGAGGAGAGGATGAAGAGGAGGAGGAGGAAGAAGAAGAAGAGGAGGAAGAACCAGAGATGAATCTA GATCCAGAGATGGGAGAAGAAGAAAAGATACAATTAACAATGGAAATAATTGAAAGGTTGGTTCAGAGAC CGGAGGATTTTAAACCTCATGCTGCTGAAAGCATCAAGGCCTACAAGGATAAACTACTCAAGATGTTTGA GGATTACGTGGCAGATCATGATCAGCAATACCTGATTGAGATGGACGGGAACAAGACAGCTACTTTCCTA TTCAGAGAGCTAATGAACAAGCTCAATACCTACATCCTCCGTCGGGCTGCCGTTCCAATCCGTCTCCAGA ACGCAGAGGAAGAAGACATCCCTGATGATGTCGATACGGAAGAGCTCATGAGGACGTTGGGCGCGACCAA CATGGTTGCCCCGAGATACAGATGGAGGAGGAGCAAGTGGGCAAGGGCATGTCCTGTTGAGCTGCAGAAA GGCAATGTAGTTCAAGGCAAACCAGAATTCGCTGTTGGATTCTTGGATAAGATCTATGTGATGTCCAGTC CTGATGCTGTGGAGATCTTCTTGAAGAACCCTCGTCCTTACCTAGTGAGCCCTCAGCCTAGGCCTCCATG TAAGCTGTGTGTAGTAGGACCACCTCTCTCAGGGAAGACATCACTCTGCCATCTACTTTCCCAGAAGTTT AATGCTATGGTACTAGATGTGAATGAACTGATCAAATCTCGCATGGAGTCGCACAAAGCCAAGCAGATAG AGCTTGCTAAACAGGAGGCTTTAGAGTCGGCTATATCATCCATCAAAGCCAAGCTCAGAGAGAAGGAAGA AACTGGATCTGAAGGGGATGGTGCTGATGATCACGATGATATCCCTGAAGAGGAGAAAGAAGCGAAGACA TCGGACACGGAGGAGTCTAGAGCGGAGGGGGAAGGAGAGGAGGGAGAAGAAGATGGAGAGAAATCCTTTG GAAAGACGACAGAGGAGCCTGAAGGAGATGCAGATAATTCTGAGGAGAAGGAAGATGAAGGTGAAGCCAC AGCCCAGGAGTCTGTTACAGGAGTGACCGAGGGAGATGGTACGGAGGCAGCTGCACCCTCCCATCATCCT ACTGACGACATGTCTACTATCACTGGGGTCGCTCCTACTGTATCACAGGTGTCTGAAGATGTGGATGAAA ACCATGCTGAGGTGATGCTGATGGTAGATGCTGCAGTGAGGGAAGCGGAGAAGCTCTCGTATCCTATTGG AGCAGATCAGTATGTAGACTGTGTAGAAGAGGCTATAGTTGAGATACATAGAGAACTCAGGAAGAAAGAT CCTACAGGTCCAAGTGCTGGTGGATGGATCATTGATAACTTCCCTCAGTCTCGTGATCACTGGACAGTTC TGCTTGACCGTGGTCTAGCTCCTGATGAGGTCATCTGTCTCAAGGATAGCAGTGAAAACGGTCATTACCT GATGAAGCGTTGGTACAGGCTCAACAAGCATGAGGTAGACACTAAGGCTAGGGAGAGGAAGGAAGCAGAC GACAGGGAGAAACGTAGGATCATAGAAGATTCAAGGATCCAGGAAGAACTTGAGATGAAAGAAGAAGCAG CTAAATTGGTCGCAGCTCAGGAAGGCATTGAGGAAGATGCAGCGAAAGCAGAAGAAGAGAAACCTGAAGG AGAGAAAGAAGTAGGAGAAGGAGAAGGAGACCAAGAAGGTGAGAAGGATGGAGAGAAGGATGGAGAGACA GGTGGAGATGGAGGAGCGGGAGGTGGAGAGGATGAAGCAGAAGCTTCTCCCACTTCTGGTGGAGGGGTAG AGGGTGATGCAGCTCCGGGCGTGTCTGATGGTGAACAAAAACCTAAAGAAGGCGCTACTGATGCAGACCC TACTACCGGTACCACTATTACTTCTTATGAAGATAAAGGTAAGACCGATGAAGATGAAGAGGAAGAGGAA GCAATACCCATCCCAGTCCCTGAAGAAGATCAGCTTCCTCCTGATGGACCAGAGACAACCAAGTTCAAAG AACAGAGGAATGACTTTGAGAGGGAGTGGCCATCCATCCAGGCTCTACTCACTGGGACTATCAACCTAGA ACCCCTCCAGTTAGAGATTGAGAACAAGCAGGTTGAAGATATCATCAAGGAATCACATAACATGGTGGAA CAGCCGTACACCTACAGACCATGGGAGTACAACAGCATTGATATGGATGAGGAGGATGAGGATGCAGCGG CCGAGGCTGATGAGGAGGGAGACGAGATGGAGGAGGAAGAGGATGAAGAAGTGACCAAGAACAAAAAGAA GCAGTTTGGTGACACGAAACACTTCTGTCCTGTAGCGTTGAAGGAGCAGAATGTTTTATGGCCTGGGAAC CCAGAGATAGCAGCCAAGTACAGAGAGAAGGTCTATTACTGCTCTAATCCAGAGGCAAGGGATAAGTTCA TTGCTGAACCCACCAGCTATGTCGCTAAAGGAAAACCATTTGTGCCCCCACCAGTAAGACTCTTGATGCT TGGACCTAAGGGTGCTGGTAAGTCTCTGCATGCCCGTGCTATGGCTGACAAACTTGGGCTCTTTCACATC AGCTTCAAAGATCGTCTCCAAGAACTCATCATCAAGAAGACCAAGAAGAAGATTGGACCAGAGTATGAAG AGGAGGAGGAGGAGCCAGAGGAGAGTGATGCGGAGGAAGGACAGAAGGATGGAATACCGGTCGTATCAGA ACCAGCAGATGGAGCTGCAGCGGAACAGACTGAGGAGGATAATGAGGAAGGAGGAGAGGAGGAGCAGGAG GTGGAGTTGGATGAGTTTGAAGAGAACATCAAAGGTAATTTGATGGGAGATGAATCTCTGAGCTTAGACT CCCTGGAGAAGTTTGTACCTGACTGGTGGAACCTGGAACCTTACAAATCAACAGGTTTCATCTTGGAAGG TTTCCCGCGTACCTCTGAAGAAGCTCAATTCATGGCTGAGCATGGCCTCTTCCCCGACGCTGCTCTGCTA CTCAACGTAGAAGACTCAGACATCACCAGCAGGTTACTACCACCTAAGCTGGATAAATGGCGCAAGCGAA GGGATCGCAGGGTGGCCCGGCGGGAGAAGCGTAAAGCTAAGAAGAAGAAGGAGAGAGAAGCAGCGATCAA GAAGCGTCGTCAGGAACTCATCTCAGAGGCTGATGATAGGAAAGCAAAGAGACAGGCAGAGCTCAGGGCT CAGAGAGCTGCGGATAGAGACAGTGATGATTCAGAGCACTCGGACGAAGAAGGATTTGATGAGGAAGAGG AGGAGGACATCGATGCAATGCTGGCTGAGGAGTTTGAAGAGGAGGAGGAAGAAGAGGAGGAGGAGGATGA GTTGGAGGAAGATGCCATCGAGAGACTGAAGAATGAAATTGGAGAGGTGTATGATGAGGATACAAATCGC ATCTCAGGCGTACAGGAAACCCTTGAAGAGATCATGATCCCTCGCATGGAGCTCAACGGTGGTCGCAAGC CTCACATCGTCCGCTTCACCCTGGAGCAGAGTCTCAGACCGGTCCAGGACTTCAGAGAGAGTCTCTTTGA GAAGGTCTATCCTGTCAGAGAGATGGTGGCTAGGAAGATGCTACAGATCGGTTATAAACATCAGTCTAGG TTTGGCAGATGGTGTCCTGTCAAGCTATTAGAAGGAGACTGTATTCAACCAATGCAGGGTCACACCTACC CAACGTTCCCGGCGGTGTACCGTCAACACATCTACTTCATGTCCACGCCTCAGGCTAGGGAACAGTTTGT GATGCATCCGCTGAAGTACCTGAAGCAAGCATCTCCTAAGCCTGTAGTCCCTGTCAGGATGGCTATCATT GGACCACCAAAGTCTGGAAAGACTGCATTGGCCAACCGGTTTGCATCCGATTACGGGATGATGCGACTGT CGATCGGTGAAGCGGTCAGGTTTGTCTTGACCCAACAGCCCAAGACAGAGCTAGCTAAACTGATCAATGC TCAGATCAGAAAGGGTATTCCCCTCCCTGATGAACTTGCCATTCGTGCCTTAGAGGTCAATCTCCTGGAT ACAAGGTCATCAACCAGAGGCTATGTCCTTGATGGTTACCCCGTATCCAAGCACCAGGTTGACCTGATGA CTGACTATGGTATCATTCCAGTGGTAGTTCTTGAGCTCAGCGTTGATAGCAGAGAGCTCATGGTCAGAGG CATGAAAGATAGACATTCTTCTGAGAGGTTGCTACCTTTTCATGACAGTGCCCAGATCTTATCAATGAAG ATCGCTGCTTGGCAGAAAGAGATCACGGGTGTGAGGGAGTATTACAAAGAGCAGCATAAGAACTGGGTTA GGGTGGTCGGTGAGAAGTCTAAGTGGTGGGTTTGGAACCGAGCTGCTGATCATTCTCAGGACAGTGTTCG TAGGATACAAGACTATCTTCAGAGGATATCAGAGGGCAAAGCAGCATCCATCGCTAACATGTGCATCACA CCCAAGGAGTTCTTCTCTCGTCTTGGTGACTTTGGTCAGTACTGTCCGGTCAGTCTGGCCAAGGACGGTG AGCTGGTGGACTGCGCTGGACAGGTCAACCTGGACAATGCTGCAGAGTTCCGTGGTCGTTACTACAAAAT GGAGAACCCTGAGAAGGTGAAGGAGTTCTTAGCCAGACCAGAGCTCTATGTCCCACCCCAAGCCCCCAGA GCCTTGCCTGCACCAGAGCTACTTACTAAGAGAAGGACTGCTATGGATGCGAAGAAGATGTTCCCTATGC AGATTGAGCTTCAGGGATATTGTCCTGTTACATACCTGGATGGGAAGCTCAGGTATGAAGCGATCCTTCC AGGCAACCCAGATCTGATTGTGGAGTATCGGGGCAGGATGTACTGCTTTGATTCAGAAGAAAAACTGCAG AGATTCATGAGGTATCCCGAGCGTTACTTCAGCCTGAAGCTACCCCACAAGCTACCTCCCAGGAGGGACC CTCTCCTGGTAACCTCACTGCCCATGTTAGGTTACATGGAGCAAACCATCTCAACGGCTATCACTAAAGC TCTGACTGCTACAGGGTGCTTCAAACCAAAGTTCCCCTTCGTCTCACCGTCCAGATCTGCTTTGTTATAC CTGGCATTCCATCTCAAAGCTTACAACCCCAAGAGCTCTGACTACGTCCGTAAGAAGTACCGCAAGAAGC TGGAGCAGTTTGAGGAGCAATGTGAACTCATCCGTTACCTAGGCAACCAGATGGGCCAGCGATTGCGCAA TCCTCAGGAGCTTCCGATTGACTTTGATCACAAGATGCTTCTCTTCCTCAACCTCAAGGGACGCGAGCCC ACACCATCTACATTAGTCGCTATGTAAACATGCACATCCTAAAGGGACACTTCAAAGCTTATTCATCCCA GGCTCACTATACGTATTTCCTAGACTAAGTAGAATTGATTCTAACAAAATTTTGGAAAGAATTGAAGCTA TTGCAATACAGGGGAAGATGTCATGAAAATAACTACATCTTTGAAAGTGCTTGAATTTGTACATGCATCC AACATGAATTTTAAAGTATGTATTTACACCTCGCATCTGAAACTGTTTGAGATGAAAACAAGAGAATTAG GTTTCTGTTTATTCGTAAGTAATTGAGGTTCAAAGATCATGTATCTTACTTAAACTAGAAAGGGCCAATA TTTCATGCAAATTGCATGTTCCAGTCGACTATCGTGTGAATATACCACCAAATAGTAAAGACATCTAACG ATTACAATTGTGATTGCACATCATTCTTATTTCTTGCTTTGATTAGCACCAAGTCTGTACAGTGATAACA GATAAGGTTTTACATATGTGTATACCAGTAAGTATATAAAGAGGATCGATTACTTTGAATTATATCTTTG AATCTGTATTTAGTGTGAAATCAAAATGAAGCAAACTACAATGTAGGAATTTTGGGGAAAACAGTGAATA TTCTGTATAATTGCAGTTATCGAATGTAGAAAAGAGAGGAAATAAAGTCAATTTGGTTTGTTTATGAAAC ATGATTCTACTTATCTTCATGTGTATCCATGGCTTTGGTGCCACAAGGATGTGCTTTCTATTTAGGTATT CTTTTTAAACTTTCACTTTCTCTGTGGCATTTCAGACTTTTACATTTCCTTTCAATAAAAGCTTATGTTA TGA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds