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Echinobase Accession
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BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
P. miniata (
Bat star
) 3.0
L. variegatus (
Green sea urchin
) 3.0
A. planci (
Crown-of-thorns
) 1.0
A. japonica (
Feather star
) 1.0
A. rubens (
Sugar star
) 1.3
L. pictus (
Painted urchin
) 2.1
Genomes
S. purpuratus (
Purple sea urchin
) 5.0
P. miniata (
Bat star
) 3.0
L. variegatus (
Green sea urchin
) 3.0
A. planci (
Crown-of-thorns
) 1.0
A. japonica (
Feather star
) 1.0
A. rubens (
Sugar star
) 1.3
L. pictus (
Painted urchin
) 2.1
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Alignment program
blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database
Database
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Acanthaster planci 1.0 Genome
Patiria miniata 3.0 Genome
Lytechinus variegatus 3.0 Genome
Anneissia japonica 1.0 Genome
Asterias rubens 1.3 Genome
Lytechinus pictus 2.1 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
FASTA query sequence
>XM_030993170.1 PREDICTED: Strongylocentrotus purpuratus one cut domain family member 2-like (LOC115917884), transcript variant X1, mRNA CCTCTTCTTCTTCTTCTTCTCCTCCTCCTCCTCCTCCCTCCCTCTTCTTATTCTTCTTTCCCACCGTGTA CTATTCCTTTGTCATCACCTCCACCTTCTTCAAATCACCTTGTTTTCTGTTACCCATGTTCCTATCGCCA TGACCTACCCTCTCTTCAAACACATTTCTATTTGCTGCTTGCGATCATCGACCCGAACCCACTCTCGGAA GCCCGAAGTCCATTACGGATTTCCGAGTGGTGTTCAACAAGCGAACCGTCGTCGTAATGGTAGCGGACCT GAATTGGAGGACGAGATTCCAGCGGCGCGGAGAAAGACGCTAGTATCCCTCTCGCGTCGGCCAGCGCTGT AGTGTTGGGAGGTTCTTTATAGAACCTGACCCCACATGTTTAAGGGACTTTATCTATGTTTGAAGGAGAA AGGACAAGGAATAGAAATATATAAAGATGCTTCATAGAGTGAAAGCGGACACGAGTTTAAGAGAAGTAGA AATAAGTATAAAAAATGAAGAGGTTTTCATTCTATAAAACATCACAGGTCTGTTATTGTTGTGAATCAGA TACATTCAGCCACATGCGCCAAATTAGAAAGTAAACCTATTTATTGCATCATCTTGGGTTACAATTTAGA AAACGAATGTATTGACCTTGATGCAGATGGTATTTCGTATAATTTATCATTAAACCACGATAATGATGAT GATGTTAATAATTTAATGACAACAATGATGGTGATGACGATAATGATGCTGTTGAAATATCTCCGAACAA CTGACGATGACAATGGTGATAGTGGTGATTCTAAGATATCTAAGCAAATATATCAATTGGAGCGTTGGCG AAAATGATTATGATATATATCAAACCTTTTAACATCGAAGAGTTGATTTTTTATATTCGTATAGCATATA CTCTGTATTAGTTCGAAGTTCATTACTCTATTATTTTAAGTGGTTAAAAGGTCATATAATCGTTCTATTC CTGGCATGTATTTTCTGTTAATAATATTCTGTTTAGGCCTATGTCATTCAATTCAAAAGATTTGTAAGTA AAAGTGAAAACGTTGAATCATGAGCCATCTCAGCATCATGATCATAAACATCATCACAACAAAAATTATC ATCATGATCATCACCATCATCATCGTCATCACCATCATCATCTTCAACATCAATGTCACCATCATCATCA TTCCAATCGCTATCATGATCATATTCTCTATTAAAAACAGCATAAATTACTCCATCATAAATTGAATGTA ACTTTGACCCCAAACCCCCATCTTGGTTTAACCATGGACCTGGTTTAACTGTGCTCAGTTATGTAAACAT ATCGAATTTCTCCCCACAGTCTGTCTAATTTATCGAACAAACATTTTCTAATCTCCCGCCCGAAACTAGG ACATTCGTGCTAAGCTCCAAAAGACGTTGACCTGTGTAGGTTAACGCGTAGTCTGTTTAAAACTAAAGCA TATGGCAGGTTAACAATACATGGCAATATACCCCCTGTTCTGCACACACAGAATTGTTACAATGAAGTTG TTACTTTGAACAGGTAGTTAGTGAGACAATTGCGCATGCGTTGTGGAACGTAACAAAGGCTTTCATACAT GGTTGAGCGAGCTGAGTCCTGTAGGGGTTTTACGTGTAATGCTATTGTAATGTCATTGAGGGGAGAGAGA GAAAGAGGGAAAACGGGGGCATAATAACAGAGTGTGTATGGTTTCATTGGCAGTGTAGTCAGTTCGAGTT TTGGAGGGGTAGAGAAAGGGAGAGAAAGAATATAGCGCGATTCGGGACCAGTTACAGCTGTCTAAATACG GACTAGATATTCGCCGAGGCGAGTTCGCTCCCATCGCCTCGCTTTTTGCTTACGCCTCGTTAATTTACTG TCTCCGATAAAATTTCTTCTCCTAGCGACCAGCCAGCAATATTTCTTCACATTTTCTTCATCATCGTCTC ATAACTTTGTACGGAGTGAGTCATCTAACATCAGTAATTCAAATACTACTGTTGGCTGTATACAGCGAAG GGGGGCTTGTGATAATAATACGGCTTCTACACACCAATGCCTTTTCTTTATCGTTTAAAAGAAGAGTAGG GATTTCGCGCTACCCAGGGCCCGATTTTGCTGGGGGTTGGTTGAGTCAACACTCGCTCGCTGCCAGCTGA TTTTCCCGAGCTAGCTTGTTTCGTCGGGGAAAAAAAGGTAGTCGCTCGGAAGAAATTGGTCGCCAAGACG CGGAGAGAAGCTTCGTAGCAAAGAAATATCACCGGACGACACACACATCACACACACGCGTACGTACGTG CGCTAGAGAAGGCCATGAACTTGGAGTAAGCGGGAGAGACCACATTATCATTTATTATCATTTTCTTGGA GTTTAAGGTCCAGCGGCTCGCACACGCGAACGCCGCTAACCGCCTAGCCCAGTAGTACAGATGCTTTCAA GTGAGTTAGTTGGCTTAGAAACAAGTGGCGTTCTTAGTGATAGCGCTACTGCAGCTTCTCTGCATACCAT ACCTGATACCCATTCGTCTTCAGTAGCACCCGGCTTAAACCCGGGCGATTTCTTTAACGCCACGGATTTC GCGGTGAGTCGCCACTCCAGACCCGGTGGAGGTTTTTCCGGGTTTGGAGGCATGTTGGAGTCGGATTTTC GCGGGGCTTCGGCCGCCGACTATGGTATGGGGTCTGCGCTCGGCATGAATTCCTTCCAAGGAGCGCCGAG CATCAACAGCATGTCATCGGGGAGTTATACGACGTTAACCCCTCTGCAGTCGTTGCCGCCCATTAACACA GTGGCGGATAAGCTGAGACATGACACAAACGTTAGCACGGGATTCTCGTTAATGAACAGCTCAAACTTAG CCATGAATAACTATGATAAACTTGGAGGTATGAACATGGGAATGGGGGTTGGGGTCGGGGGATCAATGGC TGGATCAATGGCTGGATCAATGGCTGCCAATTCCATGTTGAACGGATACGGCCACCACCAAGCGATGGCT GGGTATGGTAGCCCCCATCACGGCACCTGTTCCCCGAGTGAACCCCGGTACGCAGCCTCCATGAACGGCT ACGACCAATTCACTCACAACGCCCAACACATGCGAGGTTTCGCCCATCATCATCCCCAAAGAACTGGTCT TACAGCCCCGATGGTCCTAAATGGTCTATCGGGACACCCTCATCACGCCCCCTCGCCTTCGATCCCACCA CCGGGAAGCCGCGGCGGCGAGAGAGGGTCCGTTTCGTCGAGAGACGGCGGGCAAGCCGGAGAGGAGATCA ACACGAAAGAAATCGCAGCAAGGGTGACAAGTGAACTCAAAAGATACAGTATACCGCAAGCGGTGTTTGC ACAAAGGGTCCTGTGCCGGTCTCAAGGAACTCTCTCGGACCTGCTGAGGAACCCCAAACCATGGAGTAAG CTAAAGAGTGGACGGGAGACGTTCAGGAGAATGTGGAAATGGCTTCAAGAACCCGAGTTCCAGAGAATGT CTGCTCTTAGATTAGCTGGCTCGTCTATGGCCGGATCTCAAATAGCTCAGACCATTAAGTCCTGCAAGAA AAAGGAAGACGATGCCAAGAGCCCCTCGCAGAACAGTCACATCAAGAAACCACGCCTGGTCTTCACCGAC CTCCAGCGCCGCACCCTCCACGCCATCTTCAAAGAGAACAAGCGCCCTTCGAAGGAGATGCAGATCACCA TCGCACAGCAGTTGGGTCTTGAGCTCAGCACCGTCAGTAACTTCTTCATGAACGCCAGGAGGCGGAGCCA AGACAAATGGCAGGACGAGATGGGCGGGGTTGGTGGTAATGTGGGCGGGGCACCCGGAGGAGGCGGACAA CATCCCAACCAGGGCTCTCTAACACCAAAGTCAGAGTACAAGGCGTAGGAGTCACGGTGATGATGACATG GCTGGGGCACTTGAGAGAGATAGGCGGGGCTGTGGTATCCATGCGTTTCTCTCTACCAAAGATCGTCATT GCCTGTGCTGGTCCGAAGAGCATGTGTGTGAGCTATTACTCTTTTCCAAAAGCCTAAGTCGAGTCGGGAT CGACCTCGCCAGTAGACCTGAACCAAAACAGCATCAGCTTCGAGAAACCCAAGTCTACATCATCAGATCA AAGGCCTTTATACCTTAAGCTGCTCTGGTTGACTCCTATCTCCTGCAACCACTTCAAGGAGCATCTACCG CCGACCCTCCAAGGTAGTGGTGCGGTCTGCTGTTACCATGGCGACGATGTTGCATCATCGTTTGGTCATC TGGATGGACATTCAAAGGCTGGAGAATGATTTATTTATTTCCATTGGAATCTATCAAACTACTTTCTACA GGGTTGGACTAATTTATTTCTATAGTGTGCTGTGTGCAAAAAGGGTTTCTTTTCCGTCTTGAGGCTATAA GTGCAGTGTGCAAAATGGGCGGGGCTATCTCTGTATTTCTTTGCTAATGCCTGCATACATTATTACTTGG ACATATCACTCATGTATACTGAATATCAGCATTTCTTGAAGCAAATTATTTCATATCTTTTGCCTGACAG CACATTTTTATTCTTGCTCATCAAAATTGAAATCAAATTTAACATTTTACTGGCTGAAAGTTGTTCTGAA ATTGAAACATTGGGCTGAAATTGTAGGATGCAAATTGCAATATGTTTTGCACAATGGTGAAATAAGTAAA TTGCTATAAAACAAAAATGCTTACACATTATTTATTTAACAGAATGAACAGAAAAGTGTTGTTAACATTT TGCTGGGGTTATGGTCTACAAGTAGAGATTAAAGCTCTCTGGTCGTTAGAGGGCAACATTTCACTTGTAT TCTCTACTGTAAAGGCACAGTGAGAGAATTTAGAATGTGTGCTCTTCAAAAATGGAGATGAATTTTCTGC AATAAAATTTGGATGTTTTCTAAGTTTTTCATGTCTACCTCTACATGTTGAGAAAAAAAAGAAGATAATG AGATGTAAATGTATTCAGATTAGAAATAGAAATAGATTATGAATATTCATTATCTATTTGCATATTAAGA GATTATAGTGTACGTTAGTGGTATGCATTTTGGCTATCAATGGTGAATTGTGTTTAAATTATTTCACATT CTGTCTAACTGTCCATTATTTGAACTAAAAGTATTCTTTTGTTTAAACTCTGCTCAATTTCCTTAAATTA GCTTAAAAACTAGTTGCAATTCATAAAATATTTACAAAAATATTCATTATAATTGTTGTTATGAATGCTT TGCAATAAATGTTTTATTATCAAGGGATATATATTTCCATATGTAGCCTGAAATATTTCATAAAATGTTT ATTCATGATGGTTTTTCCACTTTGGTCGAAACATACATTCCCATAATGGATAACCATTCTACTAATATCA TTCTAAACTTTTCATTATTCCGAATTTTGACTGATATTTGTGTTAAAAACCCTTTGCAAGGGAGCTTAGC ATTCTATGACAGTATGTGTACCAATGTAGCGAAAGAGGCTGGGAGATCTGTTATAGAATTTGTTAGAAAT TACCAAGAGATTTTGAAGTATTTCTAAATTACCATATTTCTTTCACATTCCATAAGTATTGAAATCTCTA TTATATGTATATCTGCTTCGTGAGAAAAGGATGATTTTTGAAATATTATTTATTCACTGTATTATTATGT TCTTACATTTTGTGTGCTGTGCAAAAGTAGAGACTTTGTAAATCTCAACACGGGGGCAATTATTTGAAGG AAAAAGTATTTTACATGTACACTGTATTATGAGTAGACTTTTTTTTTTCACCATTCCACATACTTTTGTT CATACACATTTTGCAGTGCAGTTTAATAGTTTGTAGATGAAATAGTTAGCCAATGACTTGTGTCTCTAGT TGTTTAATTTCATTATTTTGTTTCCATTTCATACTATTTGCCAGTGTGAAAGAATTAGTCTTTATTTCAG ACCTTGTTGCTGCATTATATGGTTGTTTGAAGGTATGACAAAGAACCTTTTTTTTAAAGCCATCATTTTG ACCAAACCTAACAAATCTGACTTGCATTCTAAAACATTCATAATGTTTTTATTTGTGTAATTTCATCAGA CCTGTCCCTTAGAAAATACATTTCTTTTAACCTTTGAGAATTTGAGATGATTCTAAACATTTTCACAATT AACATCAAAGTTACCCAAAGCTAGAACAGCTGATAAATTGGCTTTAAGTGCTTAAACAAAATTTTGATCA GGTTTCAGTTTGAAATTGCCCATTTCTAACTATTTTTCCTTTTGTTAGAGAAAAAAAATGAAGTAAATAC TGAAAAAGCGATAATTCTTGCCTCTTTGATCTCTAATGCCGTTAAAGCCATTAAATTGGCCGTTTGAAGC CAGAAGGTTATTAACGCATACATTAATAGTGCATTGACCCCTTTCGGGCTTCAAGCAGCCAATAGAGAGA GAGATCCAGCTTTGCCAGTCATATTGCAGCAGGCATTTTTGTTTTGGAGTGCTTTTTTAAACCATATTTT CTCAATTTCATGTCCCAATAAGTAATTGAATTTAATCATAATCTTGATATAAAAAGTTTTTTGAATATAC TTGTACAACAAGGGAGTTTCAATCTTCTGTTTTTGTCAAGTAGTGAATTTGCATGTGCCATTTACATTAA GATCAACCACTATGGTAACATCTGCCATTTTGTGTTGATGAGTTTTAGCTATTTATAAATCAATATAAAT CGTTAATCTATTTTGCTAATTGCCTACAGAAAAGCTTTAGCAAAACATAGTTAACTTTTCATTTTTATTT TGTCTTTCAATGTCCTATCATATTCTTGTCCTTTAAAACATTTTGATTAGCATTTTTTTTGGAAGGGGGG GGGCGATTTGTTTGATTTACCTCTGCTGTTAAAATGAAATGTGAAATTCGATTTGTGAAATGTTAAATCT ATAAATTGCCATATGAGAAAAGCAGGGTCATTTTTGTAAAGGAGATATTTGTTATAAATTGTGTTAGTCT GATTTTGACAAAAAGGCTGTATCCATTTCTCTTTTTAAGTGTAGATAATATCCCCAAACTATGTTATTTG TATATATTGTACCAGAGTTGGAAATTACCTTTTATTGTGAGTGACAATTTTCTTTTTTTAAACAACCAAA ATACCTGTGTGCGTGTGAGTTTTTGTGCAATATAAATTTGTGTATATACACAATATGATGCTA
Load query from file:
Options
E value
0.1 (Default)
10
1
0.001
1e-5
1e-25
1e-50
1e-100
Number of alignments
25
1
5
50
100
Word size
Default
2
3
4
5
6
7
8
9
10
11
12
13
14
15
Default = 11 for blastn, 3 for all others.
Matrix
BLOSUM62 (Default)
BLOSUM45
BLOSUM80
PAM30
PAM70
Gapped alignment
True
False
Automatically set to False for sequences longer than 4500 bytes
Filtering
On
Off
BLAST time is limited to 30 seconds