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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
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>JT117884.1 TSA: Strongylocentrotus purpuratus WHL22.763455.2 mRNA sequence TGAATATTGAATGAGGCCGAAGGGCTTAACTGAACATGACAGGAGGAACAACAGAAACTGGACGGGGGCG GAGCCCGAGGCCGAACGCGTACGTTATATGCACATGCATCTTATTCTAATTAACAAGATCAAGACAGTTG TTAATTCTGAATTATTTAGACTTGAAATTTGCACTTAAACGTGTCAAGATGCATGCATATCACATTAGTA TATGATAATTGTATTGTTAACTTACGAACGTGGGCATCAATGCTAACCGGCCTTGGCCTAGCCATTGTTT CTCCACCGGATCGTGTGTACAGTTTAGGCCAACATACAGCCAGGGAATCCACCCCGCCCGCGCCCGGGTC CGTCCGAGTAAGCCCGGATCGTGTTACACGTTAAGACCATGTTACAGTTTAAGACCTCAACATCCGTACA CTGCATGCGTGCTATGCTCGCATGCATGCTGCAGGCAGAAGTGAAGTGCAGTGCGTACACTGTGTACGCA TGACTAGACTCTGTTTAGGATAGTTTAGTCGTGGGACCGGACAATCAGGAGAGAGGTAGATATTGCTTAA AATAACTCTTCCTGACCTGTAAACAATTAAATTCAAGATGTCACTAGGTCAAGCTGGTCAGCAACAGAGG GCGCTCACTCAAAGCAAAGACACTCAACTCAAGTCATACAAGCGAAGACTCAAAGAGGACGTATCATCCA TACTCGACAACTTCACAGAGGTCCTGAAGCTGGCAAAGGTGGAGGATGAAACTCAAGTGGCTAGACAAGC TCAAGGAGAACAGGACCAAACAGAAATGCAAGTCAGAGCAGGAAATATTGTTCGAGCAGGAGAGTCTCTC ATATCCTTGGTAGCAGACATCAAACAGTTCCTGATCTTGAACGACTTTCCTTTGGCCAATGAGAACATTG AAAAGAGGGCTCGTTTCTTGGGCAACGTCCAGAACAATGTGGACTCGAAGATAGTGCAGCTGCGTGACGA ACTCTCCAATGATCTTTACGAGATAGAGGAAGAGTACTACTCATCGAGATATAAATGATATTGAGTGACG ATGATGATGGGACTCCAAAGACAATGTTAACTTTATATAATGGACTGATGTTTATCAGCCATCCTTAGTA ATATTATGGCTGAGACCCAAGGTCCAAGGACCCCAATACCGAAAGAGGAAAACTTCAAATTAAAATCCAT TCTTGAAGTTTTGTGGGTTGAGAAAGAGACAGAGGCATTGAAATAAAACAGTCTTGACTACCGGTAAATA TCACTGTCTGCCCTGCACACACATTCGTCGTAGTCATGGTCGTATGCGTCATGTCTGACCCTTTGAGATG ATGGTTACTGCAGAGTGACAGACCTGTTAAAGGTAAAGACCAGTTTTGGAAACGCCCCCCTCTCTAAATT TGAAATGGAAGCTCTTATTACCAATCATATGAAAGAATATGTTTTGACTGATACGGGATGACACAAATTT TGCTGGGGAACCATCATATCTATCCGGTCTGTGAAGATATCGCGTTGTCCCATATACATCTTTATGTGTA CAGTGCTTGTAACTCTACCAAGACTGGGCCAAATTTTTTATCATTTTGATGATTCTTGATACACACCAAT ACTTATATGCTAGAAGATCAACCTTTTCTGATCGATTCCACACCGTTTCTTTCACAATGCAATCGCATGA CTAGAACTGGTCTTTACCATCAAGTTCTTCAATTTGTTACATTCAATCATTACCTTGCTGTACTGATCAT TGTAAGGCCTCTTCGTATTTTTTTTCGTAACGTCAAGTGTAAAACACTTAACATTTCTGACTCTTACAAC AGTGCCTAGTGAATGCTAGTCGAGCGAATTGCCTGCAATTATAATATGTCTTGTGTACCCAGGCTAGCAT CATCAGTATTACCGGTAATACTGTTCCCCCAAGGGCCCTGCAATCTTATCTTACCTGAAGAAAAAAATGT TGAATTTTCAAATCAAAGTCGGTCATACAATGTAAGGGCCTTATTTTATAAGCAAAATAAATAATGATCA TCAGATGTTTCACCCTTCCCTTCTTTATATTGTATTGACATTTCACAACTTGTAGAAAAGAAGGATTCAG ACACAGAAGTTAGTTGATTTTGTGATTTATTAATCGCTTTCCATACAAGACACGACATGTTCTCTGCATC TGTGATGTGGTTAAATAAATCTGTGGACAAATGTAGAACATGTTTTTAGCGTTTGCTTTATTTCTTTTGG TTGTACGTGTATTTAACAACATTCTCAAATATATTATCTGTAGATGCTCAAATAAAATTCATATTATGCA GTTGAAATTTTTTTCTCTCATGGTTTTAGCCGTATTCATAAACAATCATATAAGAATGGTAAATAGTATG CTTAAAGGTTATAGTTTCAGTAACATCAGCACTCGACTAATATACTGTAGCAGTATAATCTTATTTAACA TTGACATTTACCTAGAATTTTGTTCTCAATAAACGATAGGATATAAAATCATACTTCATTAGTTTTGGAT GTGTTTTGAAGAGAAAATTAACGAGGCTATCATGTTCACTCTTTGAAATTAAGTTCAGCTAACTTTTTTA TTTCATAACTAGTCCAGAATTTGGCAGGTTTTATCTCAATAATATTCCCTACACTCACTTCAAGCGGCCA TAGATGGCGATATCTACGCTCAGTAGAAATGTTAGGGATCACGTCATATTCGGCTAGCAGCAAGTAGGGG GAGATTGCGGTGGGGGAGATCATTAAAAATTAAATCGGCCAGATTCAGGACTACTTCAAAACATGCAATG TAAGGAATCTTGAAATATAACCCAATGATGCATGTACCCTTTCAACACTCGTCTTAGAAGAATTTAATTC AAAATGTGAGTCCATGTACGTGTGTGTTTTTTTCTTAGTTTGAACCCATTGCAGATCAAAATGTTGGGAC AGCAGAATCTAACGCAATACACCCTCAATAAGAAAAGAAAAAAATCTTTACAGAAAATAAAGGTATATAT CGTATTTCGTAAACGATACAAAAAATAAAATAAATGTGATGAATGGACTTTCACATTTAACAGCATTCCT GTAATAATTGCACAAAATGACATGTACCGTAGTAAACAAATAGCACCACTCCCATAACTCGTACAAAAAC TGGCTGCTCTTTTGAACCTGGTATCAAACGAGGTACCATACCGTATAATTGTGAGAAATATATAGATTGA ATGAAGTGCACATAATGATGATAATGATTAGTTTTCCCTGCTGAAGTGTAATGATCCAAAAATGAAATAT GACAGTGAAATCTCGCACTGGAATATACACCTGGCCCTTTTAACACAAAGTTTAGCAATTTATCGTATCG CAAGGAGAACTGGGCCAAGAAAAGGAAATCCTTATTTCTTGCTCCCAATTCTTCCTTTCAAAATGTATAA GTACACAACAAATCTGTAAATTCTCAATTTATAATGATGCCACATAGTAATATACACCAATACAGTGCTA TTTTGCACATGTATTACAAACTGACCAAACCACAAGCACTTATCTTCATCATCATCATCAATTATCAAAG TCAGCATTTTTCTCGTTATGAGGGGTTACTGACTTTCGCACCATGGTGACACTCCCTCCCTCCACTTTTT CTTGTCTCGGGCATCCTCTTCATTTAGACCAACCTTACTGCTTTCTAAATAAAGGGGAAACTTGAGCCAT GAAGAGTGGAGAGAGGAAGTGTCATCGTTTTACTAAAGTCATGTAACCCCTCATAAGAGATAGACTTGGG GAGGGGGGAGGGGGGAGTTTCCTTTAATTTCAAACATCCATTACTCCCAACGACGCCCCTAGGAAACATC TTTATTTGGCCTCAACAAGGCAGTTACCTGCATACATGTTATCTTCATCTTCAAAATGATTTTTGTACAA CCATAGACTTTTACCACATGAAATTTAAATTTGTTAAGGACTAATTATTTTCACAGGATTTTCTTTCCTG GATTGCAAATATTCAATGTTTATGTCACTTGTGATCCAGTGTCACCGCATGGAATTTTCCTGGATCCATC TGCAGCACTTGCAAAGTTTGCAGACATTGCATGCACAATTCTTCTTTACAGTAATTTTGTTAAAATGTCA TATTCACACATGTAGTCATGCATAAATGATGTTAGTTTATTATCAAATACACATTGATAATAAAACTATC CATGAATATATTTGAAAATGTCTATACATGGATGTTCCCGTTCCAAACTAGACTTTGGATTCATTCATGC ATGGCGTACAGTTATGCACTGCTGTGGTCAATGTTTTTTTAAACAGATAATTCCACTAGATTATGAAAAA GAAGCCTGACAGTGCATGATTGACTTTTATCAATGAATGCATTTCTGTTAAAATTTGGGCAATGTTTAAT CATTAACAGCTGTATCCAGAAAATGAAAAAAATTGAGCAAAACTACTGGTATGTTTATTCCCTTGTAACT TTCACTAATACCGTTAATCACAATACACTCTTTTTAATTGGGCAGTACACAAACATTCTCACATATCATG CGTGCCTCTACAGCTACAGTGTACTAATGGCAAAAGGAAAAGCTTGCCTGATATAGCAACTTGTGTATGA AATGTACATTCAGTGATCTAAAAAACATTCTTGATAGACCACAAGGTGGAAAAAACTGTAATTTCAATAT GCAAAGAAATAAAAGTGCTGTGTTCTTTGACAAAAATAACAAATGTGCAAGATGTCCATTATTTGCTATG AATATAAACAAAATGAATTCCGAAGGTATCTAGTTAACTTCTATTGCTCTCCTTGCAACGAGGATAACGA TGTTAAAATCACATTTTACTTAAAATATCATCTGGTAAATTCCATCTAATTTTTTAACATGGTCAAATTT CCTACAATTTTTTTTTCTGACATCATTTCATTGATTAAATTTGCATGACAAAGGAGACATCATAGCCTGC TACGGTAGATGCAGGGCATAAAATGAATCGGAATTTATTTGAACCGAAAAATGTACATGAACCTACTTTC AGACCCCCCCCCCCCCTTTCCCCTTCATTTCCAATTTTTAAATCTGCATGCAAAGTTGCAAACTAATTAA CTCCATTATTCTCATTTATTTTTTCTACAATTCTACACCACAGAATACAAATACCATATAGTTTTAGCAC ACAATGGAGATACATTTGGCTCAGTTGCAGATTTAAAAACTTGCTAAAACTTTGATTGAATTGCCTTCAG AAAGAGCTTGCCAACAAACATGAGGGCCCTATTTCATTAAAAAAAACGTTATTAGCAACAATGCAATGAT TTATTTATCCTGCAAAAATCATGAAATTCGATTGGTTGTGAGAACATTTGTGGGGGAAAAAAACAAAAAC ATGGCAGCTGTCGAAAGGCTCGTTCACATTTCCTGTGGTTTCACCGCCACAGGTATTTTTTTGTACTAAA TGAATGGGGAGTGGGGATGGAAAAAGTAGCTGCTTGCATTAGAAGTCCTAAGCATGTGAAGCACTGTACT TGAGAACCCTGGCACCATATGTGAACAGGGCTTAGTGAAGGCTGATTTGATATCAAACTCAGCTTGAGTT TGACATGATCTATCCTAACTCTATGTAGTGAATGGGTGATTGTTAACTTGAGATTGATTAAAGGCATCAT TTAACTGTTGAATCTGAGATGCATGGCCCTACCTGTTATCAGTGTTTGTGATATGGTGCTTTATTGAAGC CCTAAAGAAATTGTGCTTCAAAATGATCATGAAGTGCCTCAAAAAGTAAAAATCTTTGGGTGACCGGTTT CACCATACTCATTTCTCCAACAGACTGTAGTGTTATAAAAACCGTTAGGAAAACAGATTTTGACATTTCA ATTTCTAATCATAAATATCTTGATAATCAGACAGGCGATCGGCATGTAAAAGTCATGGGATTCCTGACTT GGTTATAATTACGATTGCAGCATGAGCTAAATCCAGGATTTTGTTTCAGAATCTGAGGCAAAGATGCCCG ATCCCTTTAAAGGACTGGCTGGTCTCCTTGTGGCCCTATGCCCAACGTATCCCGACTTCGATAGGGTGTG AAAAGCAAATCTCGCTGCAAATATGGAAAACAATACGCATCATGCACATGCAAATGTGGTCATCACATCA ATGCTACATGTAATTTAGATACAGGTGCCTTTTGCGTGATTAAGTCAATGAAATATCTTCAGGTTTATTC TGTCACCAGTGAGATAATCCATGCTCTTCCCCACTTGCATCTAATTCCAAGTGCGATGCTATACCCTGGC TACCAATTCCACATCCTATATCATCAACAATGGCAGTTCTCTCTGGAATCGCTTTCCTTTCTTCTGAACT CGAGGGGCTCTCCCTGTCTTCTTCAATGCCCTTTGAAGGCTGTACAAGGGGACCACCAGCCAGACTTCCT GCAGAATTCTGTGATAATTTGTCAAATTCTGGACATGAATGACAACTGTTAGAGGCTGCAGCTGATGCAC CATCTTTGACGTGGCTTTCATCTGGTAAGTTCCCTTTAGATGCATTGGAAGCTAAGTTTGAGGGGGCACT GGACCCCGAGTGCACTCGCTGGAAAGGAGAAGCTTCGCTGAATCTTAGCGCGGAACTCTGCACCTTGTTC GTTTTAACATTTAAAGATCCTTCTCTGGACCGAGACTTTGCAGCAACGGCTGCGGCAGATCCTTGAGCTA AGAACTCTCCTGCACGTGGACTAGGTGCCTTTGACCTCTCCTGTCTTGTCTGTAGAGCACGTTTAGAAGT AGGAGTGGTATTCTGCACCCCAGGTGACGTTCTTAAATTTGTGGGTGCCGTAGCTTCCCCCTCAACTCCT AATGGAGTCCGTCTCTCGGCCGGATCGGGCCTGCTCTTCTGCGAGCCTGTACTGCCACTGCGATTAAATG TCTTCTGCGGACTGTTGGATCTGCTGCGAGAAATCCCGGAGCTGGAAGTAGAATCGTCCAGCTGAGCTCC GTCTGGATTTGAGCGTTGCCGGGCGTGGCCACGGTGACGGGAGGTGCTCTGTTTGGTGAGTTTGAGAATA TCGCCCTCTAGACGTTGGTTGACCTTCTTCAATGAGTTGTACTTTGATTCCATTGCCTGGAACACAATGA GAGATCAAGA
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
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???blast.gapedalgin???
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Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds