Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.echinobaseSearchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030985713.1 PREDICTED: Strongylocentrotus purpuratus cytochrome P450 26B1 (LOC100891579), transcript variant X6, mRNA AGAGCATCCGCACCGCTGCTTTAAAATCGAAAATAATTGACCACGGACTCGCAGTACCAGCACATTAAGG CGGATTTTGATTAATAATACTCAATTCAAGTGGATAGTAAATGATACTGGTACATTCATCTTCTGACTTG ATTCCTATCAGGATGCTGCTGTAAGAAAACACCACACTAAGATGGATCTGGGATACAAGGCCATGCTTCA CCATCTCTATGGCGATAACATCATGTTTGAAGAAGCAGCCGAGGCAAACAGACTTCATGCTCTCATGCAC CACGTCTTCATCCAGAATGCCCTGCTAAACTTTGACAGCATCGTCCAGAAGTTCATCCAGAGGCATTTCA GTGATTTGCATTCCAGGCCCTCTGTTCAGGTGTATGAGACATTCAAACTGTTTGCGACTGAGCTCATGTT GGCGCTGTTCCTTGACCTTGACGTTTCTGATTCTGCAGACCTGGTTCATGATGTAGCGTCGTTGGCAACC ACACATTGGCATGGAGTGATTTCTGTTCCCATGAACTGGAGTGTTTCATATTGGTCATCATCCTGCAAAC GAGCTGTAGAAGCAAAGGACAAACTATTGGAGCGAATACGAGATCGTCTCGCCAGCCAGACAGACGAGGG CTCTTTCCTAACGAGGGCCAGGGAAGCTGGATTCAAGGACCATGCAGAGCTTGAACAGCATATCCTGCCC TTTGTATCAGCATTGGTCCCTAAAGCAATAGCTTCCCTCCTGGCATCTTTCACTCTTGCTCTCTGCTCTG AAAACCAGGAAGACATGCAAGAGAAGGCAAGAGAGAGCAGTGATTATCTGGATTGGTGTTTACTGGAGAC GGAACGGCTCTGGCCTCCGGTGCTAGGAGGGAGAAGACTCGTCAGAGAGGATTTCGTGCTGGATGGCTAC AAAGTCCCTAAAGGCTACGCAGTCATCTACGTCTCATCCATCGCCCATAGAGATCCTAATGTATTCAAGA ACCCAAACAGCTTTGATCCAACGAGATGGGCAAACAAGCGCACTGAGAAGGAGAAACTGTTATTTTGCTA TGGTGATGGGCCAAGGTGCTGTGTTGGTACATCCCTCATGAAAAACTTGATCAAGAAGGTGAGCCAATAC TTGGTGGGTCATTACAACTGGACATTAGGTGACCAAGAGGAAGATCTTGATTACAAATGGCTACCCATGG CTAGACCAAGAGAACTCTCCGTCAGTTTCACTAGAATCGACCAATCAGAGGCCTCATCTGAACTGGCAGG GAGCGACTAGCCTATGGGCACAGAATCTACTTTGAAACTCGAACACAATCAGATGAAACCTTGCGCCTTG AGCCTAGCCTGGCTGTCAGGAGCTGAATTTTCTGTCACCTTCACTTGATTTGACCAATCAGAGGCCTTGT CTGAACCAGCACAGAGCGACAGTCCTAGTCATAGGAACATCTCTTCTTTGACACCCAAACACGATGCCAT AAAGCCGAGCCTAGCTCCATTTTGTCAGTCTTGGGCTGCGCTGCGTCAAGAGCAGTGACAACACATGGCT TATGGATGGACTGCAATCTCCTTAGTCTTGCATTTCAGACCCTCTATTACGTGTTATCATAACTTGCTGT TCTTGTATAGAGCAGATCACATAACGATATGACATCTCTATGCACTTGCAGAGGATGTGGCATATTGTTC CCCCCCACTTTAAATCTGGCTGCTTGGCGCATTCAATTGGATTGGAACCCTGTACTTTATGAATCACAGT TCAGATACTTATCCACTGGACCACTAGTTAGCAAAATAAATGGCTAGTTTATGTTGGATTGTGATGGTGC AAAGCTATTGTGCAAGAACTTTCCTATGAGAGAGGTCCAACGAAAATAACAGCACCAAAAATGAGTGATG GTTACTGATGATCATTACGAGTGAGATTGCATAATTAATAATTGTGAAGTAAAATAACCTTAATTAAAAG CATTATTACGTTCAAAGCAGCTTTTCCCCCTTTTTTGCAATTCAGAAAGAATTTTAAATCATTGTGCAAT CTACAAATATACTTCTTCTTCCACCTCATGTAATCTGTTAAGTGCTATGCAACCAGTCACTTAACCATGT GGATATTAATAAATACAAGAACAAAGATGATATATTTTTACTAAAATTACAATAGCTACTCAACATACAG TTGTAATCATGTCATAAAAACTGCCAATGGATGAGAGTAGCTATGCTGTACTGGAGTTATCAAATTTTGT TTTGTCGGGGAAAACAAATATGTTCGAAACTTGAAGAACTCTCTAATGAATTTGCTGCATTCACAGTTTT GCGGACATGTTATGATTTATTAAAGAAGTTGTTCATACAAAGTATTCATGAAATGTGTTCTGAAGCGTAA GAACTCTGAAAATAAACTTGCCTAAGATATGCCTTAATTTTGAAATTTTGTAAGCCAAGACTGTAAATTT AGATTGATGAAACCTAAAATGGGCAACAAATGGAATGTTGCAATGTAATTCAGATCTGATATGTGTACCC ATACAAAATGTAATCTAAAGTCCAAGAAGTTGATAAATTGTTTGTTTTTAGTATATGGCAATGAAATTCT ACGCAAGTAATAAATCATTCCGAACTTATGAGATCATTGTAAATTAAGTTGTTCATATCAGCTGTAAAAC TCATACATGATCTGTTTGTGGAAAACTGTTAACATTACCTATAGAAGTTGTTAAGTTTATTCTATTGTCA CTCTGTATGTTATTGATATTTGATATGTGTTATATTTTCATTAGCAGTACTATTAATCTATGTGTGTCTT TTTCTATTAGGTGCTTTCGTATTTGTATAAAGAGACTGATTTCTTTCACTACTTATATTTAAAACAATGT TTTGTAGAAAGATGTGTGAGAAACATTTATATTTTTCCTTATATCATTCCAAATACCTCAAATCATGTTA CTGTCATTTCTTGTGTGGATATATTGAACTACTTGTAGTAGATATCACTTTAAAAACGAAATAGGAAGAC AAGTTTCCTAGAATCCTAGTGCATACTTTACCAGAGCTGCCAACCCATACGATTTTTAGAAGTAAATACA ACTGTAGCATCTTCATCAATAAAATAATTTTTTCCACAAAAAAAAAACAAAAAACACACACCAGTCATGA CGAAATCATGCATATTCAACCAATGATACATCAAAAATATTCTTCCTGTATGTAGGAACTTATGCAAAAA CATCCATGTTCGCGGTGAGAAAGTACTATCGATCATGTTTTGGGGAAAAGAATAGGATTTTTGTTCAGTT GAGGTTGGCAGCTCTGTAAGAGACATTGATCTGCGTATCAGTCTGCGTTTTTTTAAAATACAATATTATT CAGTAAAATACACCTTTTAGGATTAAAGAATACAGCTTTTGAATTCCAGAGGTTGGCAGCCAGGTCTGCT TTAGAAGCACAAATTTTCTTTGAGGCTGGTATTGATATGCATTGTTTGCTGAGAACCAGAAGGGTCTTTA TTTGTATACTTTGATGCAGATGATATGTTGCATGTACACGTAGGATTGTTTCATTAAGTGTGCAATACAT GTGGTTCCATATTATGCAACTCACTCATAGATCAAAATCAAATGATTTATTTTAGTAAAATGCAATCCAT TTATTTTACTGAGACTATCCCATGCTCTTTCATGAAAAAAAGTGGAATAGTTTCCAGAACTATCCAACAA TTTTTAAGTATGCAATGCGCATCAGTGCGCATCAAGGTTAGTGTGCTTATACTGTGTTTTGGCCTACGTG TATACTTACACAGCACTGCACAGAAAAAAGCGTAAAGAGGTTAGTGTACTTATCTGTGTGTGCACTAAAG TAAGCCTATTAACATTGGGGCTTATTTGTCAGTGGTAATGACACAAAACAATCTTGAAATTAATTATTTT GTAATATCAAATAACTATGGTCTAGGAGTTTCGACGCATGAAACAAATGATGCGTGTTTTCATTTGTTCA TTACAGGATCTATCACTCTCGTTGAGGCTGTATATGAACCTATCGTACATATATCCTATTAATGCCCAGG GGCGGATCTACAGGGGGGGGGGGGTTAAGGGGTTAGATCAACCCATTATGCGGCTACAGCCTCAACTCAA GTGTAGGTAGATCTTGTAATGAACTAATTTGCATGCATCATTTGTATGGTAATGTTCATTGCTGCTGCAT CTCATGGAACTTGCCATGAATTTCATATCTGCACAAAATGTATTCTACTCTACTTTATTTCAAATTTGAT GTTTTATATATGTGATAACCCTTAATTATATTTGAATTTATCAAAGAATAGTTTATAAAATACTAAATTA TCTAATTAAACAATGAGATGTTGATGTAAATGCATCATGTGCTACATTTACATGTAGGTCTATTTAAATC CTTTAATGATATGATGCATTTTATAGGACAATAATCATGGAATTTGTGAAAATTAATGCCATGTATAATA CAAGATTAATGAATGCTGCATGTACCCGGTACTTTTTATATCCAGCTTAATTGCTGTATTAAATAAGTAT TAAACTTGACCATGAATCTTAATAATTCAGAGCACAATATATTTTCTCTGTGACATGAGAGAAACATTAA TCGCTTCATTCTTTTAATTAAATGTAATGTTAATTGTTATTGTGTAAAGTGGGGGCACGCTACAAGAGTC CTATCTCGCACCCCGGGGCAACGTGTCTCACACGGCCGGTTGTAGCAACTACTCTGAAGATCAAGATACA TTCATCTGATCTAAGGAGACACGAACGAACGAGAGCACAGACATACATCATCTGATTGGAACCAGAAGGA CTTTAACTCGTATACTGTTAGATTAAACACAGAGTTAACACCCTTCTGGCTCTGAACAGATGTCATGTAA TTGGTGTTTAATATTACACTCTACATCATGCCCTGTGAGGCCTTGGTGTGCTATTTTAAGCCCTACTGTA CTACTTATAGCTACTTGCTCCCTCTATATAGAAAACAATGCCTAATCGGTGCCTGTTGGTCCCTTATGAT CCTCTTTTTCTTATGTTAGTTGAGAGCTGAGTTCATGAGATAGCCACCTGTCAGTGACCTCGCTGGGTGG TCTAGTACAGATGGTCTTTAAGTGTGGTGCATGTAGGTGTCTGAAATATGCTAAATTTGTATAAATGTGT GCTCTTAGCTAGTATGCGAGATTAAACCCACCCCATAGTTTATAAATAGAATGGCAAATGATATTAGTAA TACGAAGAGTACATGTTTGAATAATTGTCTCAGGAAGATCAGATTCCCCTCAATGGAGATACTTGTAGAT TGTGCTATTACCATGTAAATGACGCCTGGCTGGAAGACTCCCCAGGGAGTGGAGAATGTGCATACATTGT GTGTGGGTAAGCCTGAATCCAATGAACGGGTAATATATCTGTAAAGCGCTTTGAGAGGGCTTGCGGTCGT GAAAAGCACTGTATAAGAATGAACTATTATTATTATTATTATTATTATCACAATCATCACAATGATAGCA ACATGTATTTAAATGTTTTATGCAAGATCAAACTCACCTGTTTGGTATATAGAATGAAAGATTATTAGTG TATAGAGTTAAAAATAATTAAAGAATTGTCTAAGGAATATTATATTTCTCTACATAGACTCGGATCATGT TTTTAATATGTAAATGATTTCACAATGATAGGTATATGTATTCAACAGTTCTAGGCTGTCTCGTAATTAG ACACTGGGGCCAACTCAGACTCAGTGGAAAATCATGGTTGAGTTATCCAGGAGAGCTGAATTGATCGCAA GTACTCAGGTTAATTTTGCATCCAGTCTATTACGTCTTTTAGAAAAACTCACATTAAAATTATTCTATAG GAATGTGTATTAAAATAGTACCAACAAGTTAAGAAAGTTTGAAATAAATAAATTCTTCAAAACATGAAAT GTA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds