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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041619381.1 PREDICTED: Lytechinus variegatus polypyrimidine tract-binding protein 1-like (LOC121423867), transcript variant X3, mRNA GTAAAACGAGAAAATAGTGCGTCATCGCCTTCTCGGGTGGTCCACATACGTAATCTCGCCAACGAGGCTT TAGATGCCGACGTCCTAAGCCTTGCCCTACCTATCGGTCGTGTAACCAAGTATCTTATGCTCAAAGGCAA AAACCAGGCATTCCTCGAAATGGCAGACGAAGCAACAGCACAGACGTTTATCAACCATTACACACACATG CCCAGGAACGTCCACGGAAGACAGATCTACTGTCAGTTCTCAAAGCACAAGGAACTCAAAACCGACTTTG CCCACACGCAACAGCAAATCGCCTCACAAGTGGCCCTCCAAGCGGCCCAGCATCACCCCATGCTCCAGCC TCACCTAATGCCACAGCAGCCCCAGCAGCACTCCACACATCCCAAGGTACCCGACACAGGCGGTGGAGCC AACACCATCCTCAGGGTTATCGTGGAGAATGTCACCTACCAGATCACCGTGGACACCCTCCACGAGATCT TCAGGAAGTACGGAACCGTGCTCAGGATTGTCACATTTATCAAGAGTGGTCAGTTCCAGGCACTTGTACA GTTTTCAGATGCATCACAAGCTGCTGTAGCTAAATTAGAGTTAGATGGAAAGAACATCTACAACAACTGC TGCCAGCTTCGCATCGACTTCTCGAAACTGACCAACCTCAGTGTCAAGTACAACAATGAGAAGAGCCGGG ACTACACGTGTGACCTGCCACAAGGTGATGGACTCACAGGGGTCGATCCCAGCACTGCTGCTATGTTAGG ACTTGGTGGGGCTGCCGGTCTTATCTCGCCTTATGCCGCAGGGCACGGTCTGCCCTTTGCCGGTACGACG CCGGTCTCTCTTGCAGGATACCATCAAGCAGGAGGAGTACCCGGTTTCCCCGCTGGCCTCTCTGCCTTAC CCCAGGCTGCTGCGGCTGCCCAGGGCATTAGGCTCCCGGGCATGTACATGCAGTCGGGCTGCTGTGTCAT TCTGGTTAGCAATCTCACTCCAGAGCTCGTCACGCCTCAGGCCCTCTTTACCCTCTTTGGTGTCTACGGA GACGTGCAAAGGGTGAAGATTCTTTTTGAGAAGCGGGATAACGCTCTGATTCAGATGAGTGATCCTCACC AGGCACAATTAGCCATGAAGCATCTCTCTGGTGTTAAGCTGTATGGAAAGCAAATCCGTGTCACAGCATC CAAGCATCAAATGGTTCAGCTCCCGAAGGAGGGACAACCGGATGTCGGTTTGACCAAAGACTTCAGTACG TCACCCCTTCACCGATTTAAGAAGCCGGGCTCCAAGAATTTCCTCAATATTTACCCACCTAGTTCTACCC TGCATCTCTCAAACATTCCGCCCACTGTCGATGAGGAAACATTAAAAGAAGCATTCTCCCAACATGGTAC TGTAGCAAACTTCAAGTTTTTCCCGAAAGACAGGAAGATGGCACTCCTGCAAATGGGCTCTGTAGAAGAA GCAATTCATGGTCTAATTGCAATGCACAACTACCAACTGGCTGAGTCAAATCATCTTCGTGTGTCGTTCT CAAAAGCACAGATCTAGAGGCGAGACCACCCCCCCTTTAATAAAGTCAACGCACACATGGAGCAGTACAA CCAAGCGATATCGCAATAAAATCAACCAATCTTCTTAGAAATAAGAAGGGGACAACATGACAACATACCA AGAACGATGATAAAATTATACCTGAATCACCCTTAGTGCCATTTAAAGATGGGATCATGCAATGCAATGA TGACAGCGATAACGGGAAAATATAATAAAGAAAGCACACTGGTCTGAGACCAGAAGGACTCAAAAATATT CTGATTAAATGTTTTTGAGAATTGGCAATATTGGACGGAGTTTATTTTAATGGTGTTTTTTTAAGATAGA CATATGGAAAAGGAGCATGGATTTGCCCATGATGATAAAATATGACTGTGATGCTTTGATAGGCATTGTT AACCATCTCCTGTTATCTGGACAGGGTTTTGTATGGTAGTTTATATGGGATAAATCTTTTCTGCTCCCCT TCTGAACTTCGTACTGTGCCCTTTTCTTCGTTTGGATACCCTTCTCCTACCCCCCCACCCTCATTACCCC TGGCGACTCTTACACACTTTCTCAATGCTTACAAAATTTCATCTTTATATATGGGCAAGGTTTCTATGAA GCACTTGCGTCTACAAATTATGTATACCGAAGCAAAAATAATGCTTTTGGTATTGATCTCACGCCTATAT CCTTGTGTATCCCAAGTTAGCTAAGGAATCTGGTGTGTACATTGTAAATAGATAAATTGATAACAGAGAT GAGAGAGAGAGAGATATTTTGCATTTGTAATTATTATACAACTGCAATGTGTTATTTTGAATGAATTTTT GAAAACATTTTGATCGCATGTCTCTTGATATTCTTTCTGTGAATTTTTTTGATGTCAGATAATTTTACTC TAAGCTGTATTGTGGTGTGGTGTAAATTTCATTGAATTATTTTTTCTTGTATTTCCTCTCTCTCTCATTC TGTGTTCTTGGTAGCTTAGAAGTTGTCTCTGCTAACCAAAAAAAAAATGTCACAAATCACTTTTTGAGGT ATCCTCTTTTAAGAGTAATTTATGTCAATAATCATGTATCATTTCGTTGAAAATTATTCAACCGTATTTA ATCACCTTGGTTAAAACTCAGAAATTCTTTGTCTCGGTTTTACATTTCTTCTCTCAAAAGCTCCAAGAGC TTATTTCCTTCTCTTGCGTGACGCCAAAAGGACGTCGAACCCCGACGCTCAGGGTCGTTATCAAGCTTGA ATCATTACGTATAATCTTTGTAGATATTAATTTGCCTGTTTTAATATTTGTTTTTTGCTGTGAGATAATT TGCTAGAATAATTCAGAGACTATTAATTTCTTTGAAAAAGAGTCACAATTTCACTTTGCTTGGCATTTCC TTTCTGCTGTGAGCATGTAGAATTTTGCCTTGTTTGTGAGCCACTGACAATAATTGAACATTCCACATGT GTTGCACTTCAATTATCTCCTTTTTTCAAATAATTCTGTGTGTCGCCAACTGTGGTTGGATGTGATTAAG AACAGGCCTGTTTTATCCATAGTACAGTTTGAATATAAAGCAATACATTGTATTTCTTGCTTGAGTAATT TATGATCTTTAATTATCATTTCATTGCCGTTTCTGGCATTCTTGCATTTTTTATTATTAAAACACATCTG TACGCATATTAATCTGATGTGTTCATTGACACACATTCGGGTTTGATTTCACAAATTGTTTTCCACTCCC AATGAACATGTTTGTACGCAAACGGGACAATCAATTGCAGTTGAAAGAAAGTTTGATAATCATTATGCTT TCTTGGTCTGTGTTTTAAGGATATGTGCAAAGTGCAAACTGAAAAAAGAAAAAATTGAGGCTTTATTTTA GTCACTGCTGTTTGAGATTTTTTGATAATCAGGCAGTTTAACATGTGAATTGATACTTGTTTGTAATTGC AAGTGGTAATCTGTATATCTTATCTAATTTCCATTCTTATCCAACGTACACTAAGCTATATATCATCTTT TAAGCTAATAACTACTTCTTGTGTATATTCAGAGAGAAAGAAAAATTTCTTGTACATGTCATATTTTTTG TTAGGTTAGCCCACTTTTTTCACTGGGTCTGCTGTGGTATAATTGTGTAAGGAGATTAAGGCAAAGCTTT GCTGAAGTATTTAGTTTCCGTTGTGTATTTTTTCTCCAAACTTGCGGAATTCTGTCTCTTTGTTGTAATA TGTGCGCCCTCACACGGCCTGAAATTCTGCCTTTCACAAGCCTGTAGACTGAACAGTTAGGGGAAACTCT TCTCGTGACATTGTGCAAATTTTTTTTGAGGGATGAAATGTTGGGCGGCTGATTTTTAATGTGCCTTATA GAAATGAGGGTGACATATCTGGTACTATTTATGGTTTTCATGAAGATGGACAGATGAGAGAAAGAGAGGA GCCGCGAAAGTTCAGTACGAATTCGGAAAAGGCAAAATTCCGGCTCTAGAGATTGAGTCCACTTATTCTG GAAACGGTTTCAAACAAAGGCTTGGTTTTTCAGACAGTGTGAGGGTAATTGGAGAGCTTTTTACTATTTT TCCAAATAATCATGCATGCTCATGATATTAATGAGAATTCTCATATTAATGACCATGCTATGTTTCATTT GTCTATCTAGATGCGTATGCTGCTCTCGCACGCACTTGTGTAATACGTCAGAGGGTGTACTGTACTATTT TTTAACGCTTCAAGTACGATTCTTTAATGATAGGGTATAGAACAGGCTATTAATCTAAGGGGGGTTTGTG AAAACCCCCCTCTCCTCTTATGGATTTATTAGTCTTGTACATGTAGTGTATTGGCAAGTTTCACTATATT ATTCCATGTTGTTTATCTCAGTGGTATTCATAAACGTGACTTTGTACAAATTTGACATGAGATAATAATA TTGTAGTTTTCAAGTTATCTTAGATATTTAGAGAATGTACTTGGCTAGCTAAGACGTATACTTCTACAAA TAAGTGGTTCTAGGGTATGTACTTGCTGTATTTTTCTCCTTTAATCTTCTCTGTATTTTTTTCTGTGAAG GCTATGAGAGTTATTTCTTCTTCTTCAAGCTTCTTCGGCTTTGCCCATTTTTTTCTTCTCGTTCTTGGCA GTGCCCGTTGACTCGCACCATGGAGTTGAGCAGCATCTTTTGCGTGTTTTTGTTGTGCAAAATTTATCAG GCTTTGCAATATCATGATTAAGAATAACACTTTTAACTCATAGTTTCAACATCCAGCTGCATGAGATTTT ATTTTTCCATTTTGTTATGTAACAATCGTGTTCCTCCAAACCGCCAATTGTTTCAACAAAACTATTATTA ACATGCACCAATCAATAGAGTTTCTCCCTCCTTTTGTTTTATCCCTCAATGTACATAAATCCCCCCCCCT ATTCACATTTTTGTTTAGTAGCGGTACTTTACCCGTTCTTCTTCATAAATGTTTGATTTTGAAATCCTTA ATTGTTTCACAGTGAGAATTTGTCATACAAGTCACTCATATGTATCTCTATTATGCTTTTTCTCTCTACA CGCAGTCGATTGAGCGCAAACAGCGCATCAACGTCTATCGCTACGCTATTCTCTACTCACATTGATGCAG TTATGAAAGCCTCTCTTTTATGTCATGTCTTTACTACACTCAAGTTTGTCAGTCAACAACCGACCACCTC CAAATTTTAGCTCAACGACTACTCCCACGCTTGAACTTGATCTCACGAGCTGCTTCCGCAAGCAGCATGC TGTTGTCAAGCGAGTATCGATGGGTTACGATTTGGAGGTAGTCTTTTCAGAGTGTTTTTTTCTCTTGGAA ACTATTTGTTTGAAAAAAAGGGTTGCCAGAACCTCAAAGCTCGAATCACGTTGGTAAAAAAGGAAGAACA AATTCTTCTATGTGGAAACAGTGGCACAGGAATTAATATTATTGAGAGCAATTAAACCTAAAAAAAATCA GTCTATATATTGGATGGAATAGTGAGAGCATTTTGAGTAAATCATGACTGATACTTAAAAAATAACTATC CATTTAGACATCAAATTATTTCCCTTAAATGGGACAAATACAATCTTACCAGCCATTGAGGCTTAAGTAA CATGTATCACTTTGCCCCATTTGTTGGTCAATCTTTAATCTCTCTGAGCTAAACTCTTTGTGTTTCTTTA CCAATGTTGTGCCTCTAGTATTGTTCTGGCAGCCTTTGTTTTCATAAAATCTGTTCAGATTTGATTTTTT TTTGCTTGATCATACACCATCCACGGCCATAGTCTCATAGCAACACTTTGTATCCTGCCATTTTATTATT GAGTTATTTTTTCTCTCTCTCCTCTTCTTAAGAAATTATCCTTTGTTAATTTTTTTCTCTCTATTCTCCT ATTTCTGCTAATAAACTCTCAAGACTGTGCAAAAAAATCTTCTCTTGTGTTCTCTCTTTTCTCTTCGACT CTAACTACCACTTACTACTACTACTACCACAATCACGTATTCTCTTGACAACACAACAATCAAAATTATT CAAAACTTGTGTATTCTTCTCCTGGTCTATTCTGTATTCTTCTCTCTGCAACATATGTTTGTGTATTATC TCAAGTGTGAGGCTGTCAATTTTAAACTTGTTTATCCTATAGCCAGGTTTTTTTTCTCCTGTTTTTTCCT TCAAAATTAACATTTTGTTGCAACTTGCTAGATGGATTTTTATCATGAAATAACCAAGTGCATCTTTTTT CTACTTTTAACTAGTAGTTGTGATAGGTTTTAGCATGTCTCATTCTGTTGGAGACCTTAATTTTGTGTGG TGTACCTAGATCTAAAAAAAGAAGAGAATTTGTTTGTATGTGATTAATTTATTGATATTATATATATACT CCAATCGCATCCCAACATTGTCTTTCATAATACGCTGGCCTCCGACCTTTGACCTTGCACTGGAGGTCAG TACGAGCACACATCATGGGTCATTTACAACTTGAAAACATTCCTTTGATAATCAGTCTGTGGATTCCGCT TCTTTTTTTAAACCAAAGTTGTTTTTTATCACAGAAACTGTAGAAAAGAATGTGTTTTACACAAAGATTT GCACCCCACTCGACAGATGATTTAGTCAATAGCTAGCGATTCTCCGCATTTTATAAGACGGATTTGGACA TTTTTATTTTTTCACTAAGCAATCAATGTACAAACGCAAATGGATTTTTTTTTCTTCATTTTTTTAGGGT ATTGGATAGAAGGCCTTAATTTATTGTCATTTTTATTCCCCTACAAACTCTAGTGAATAGTGTAATATTC TGAAATCGGAAAATTGAAGTACCTTGAGATAGTACCATGGGATTAAGTTAAGCTTAATCCCCCTGGAATT AGGTTGAGCTTAATCCCATGGGATCAAACATATCTTGAACGATTGCGCTTGGGCGATCGATTTGGAGATG CTCATTGACTCGACTATGACTCCAGAGATGCCTGAAATAACCAGGGATTTTTCAAGTGTGTTGTAAAAAG AAAAAAATAATGAAAGAAGTGAGAAAAACTAAAAAAAAAGATTGAAGAGATTGGATATATTAACGTGTGA TTTTCATGGTAAATTAAAAATACTTGTTTTATACAAGAGGCTGATGGACCTGTGA
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???blast.eval.minus100???
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???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds